RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 LCE2BO14633 110 aa3.01□□□□□ -1.93
PROM1-220ENST00000540805 P0C880 135 aa3.01□□□□□ -1.93
PROM1-220ENST00000540805 ABCA13Q86UQ4 5058 aa3.01□□□□□ -1.93
PROM1-220ENST00000540805 DYNC1H1Q14204 4646 aaKnown RBP3□□□□□ -1.93
PROM1-220ENST00000540805 SEC61BP60468 96 aaKnown RBP2.99□□□□□ -1.93
PROM1-220ENST00000540805 ROMO1P60602 79 aa2.99□□□□□ -1.93
PROM1-220ENST00000540805 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
PROM1-220ENST00000540805 FAT1Q14517 4588 aa2.95□□□□□ -1.94
PROM1-220ENST00000540805 R4GN34 69 aa2.95□□□□□ -1.94
PROM1-220ENST00000540805 A8MUU9 505 aa2.95□□□□□ -1.94
PROM1-220ENST00000540805 KIAA1109Q2LD37 5005 aa2.94□□□□□ -1.94
PROM1-220ENST00000540805 HSPG2P98160 4391 aa2.94□□□□□ -1.94
PROM1-220ENST00000540805 A0A1B0GU33 70 aa2.93□□□□□ -1.94
PROM1-220ENST00000540805 TNXBP22105 4242 aa2.93□□□□□ -1.94
PROM1-220ENST00000540805 KRTAP16-1A8MUX0 517 aa2.93□□□□□ -1.94
PROM1-220ENST00000540805 KRTAP25-1Q3LHN0 102 aa2.93□□□□□ -1.94
PROM1-220ENST00000540805 S4R3F8 94 aa2.92□□□□□ -1.94
PROM1-220ENST00000540805 H0YAA0 97 aa2.9□□□□□ -1.94
PROM1-220ENST00000540805 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
PROM1-220ENST00000540805 HERC1Q15751 4861 aa2.9□□□□□ -1.95
PROM1-220ENST00000540805 FAT3Q8TDW7 4589 aa2.9□□□□□ -1.95
PROM1-220ENST00000540805 KRTAP13-2Q52LG2 175 aa2.89□□□□□ -1.95
PROM1-220ENST00000540805 M0QZ58 72 aa2.88□□□□□ -1.95
PROM1-220ENST00000540805 LRP1Q07954 4544 aaKnown RBP2.87□□□□□ -1.95
PROM1-220ENST00000540805 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
PROM1-220ENST00000540805 UBR4Q5T4S7 5183 aa2.87□□□□□ -1.95
PROM1-220ENST00000540805 A0A1B0GVY2 172 aa2.86□□□□□ -1.95
PROM1-220ENST00000540805 KRTAP10-4P60372 401 aaPredicted RBP2.86□□□□□ -1.95
PROM1-220ENST00000540805 KRTAP1-4P0C5Y4 121 aa2.85□□□□□ -1.95
PROM1-220ENST00000540805 PLAC4Q8WY50 150 aa2.84□□□□□ -1.96
PROM1-220ENST00000540805 H1FX-AS1Q4G0G2 97 aa2.83□□□□□ -1.96
PROM1-220ENST00000540805 C20orf166-AS1Q96NR2 134 aa2.83□□□□□ -1.96
PROM1-220ENST00000540805 MYCBP2O75592 4640 aa2.83□□□□□ -1.96
PROM1-220ENST00000540805 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
PROM1-220ENST00000540805 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
PROM1-220ENST00000540805 LCE2CQ5TA81 110 aa2.82□□□□□ -1.96
PROM1-220ENST00000540805 KRTAP4-5Q9BYR2 181 aa2.82□□□□□ -1.96
PROM1-220ENST00000540805 HMCN2Q8NDA2 5059 aa2.79□□□□□ -1.96
PROM1-220ENST00000540805 RPL37P61927 97 aaKnown RBP2.78□□□□□ -1.96
PROM1-220ENST00000540805 KRTAP3-1Q9BYR8 98 aa2.77□□□□□ -1.97
PROM1-220ENST00000540805 LPAP08519 4548 aa2.77□□□□□ -1.97
PROM1-220ENST00000540805 RPS29P62273 56 aaKnown RBP2.76□□□□□ -1.97
PROM1-220ENST00000540805 KRTAP15-1Q3LI76 137 aa2.75□□□□□ -1.97
PROM1-220ENST00000540805 LCE2AQ5TA79 106 aaPredicted RBP2.74□□□□□ -1.97
PROM1-220ENST00000540805 KRTAP13-4Q3LI77 160 aa2.73□□□□□ -1.97
PROM1-220ENST00000540805 XP32Q5T750 250 aa2.7□□□□□ -1.98
PROM1-220ENST00000540805 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
PROM1-220ENST00000540805 KRTAP10-8P60410 259 aa2.68□□□□□ -1.98
PROM1-220ENST00000540805 KRTAP10-6P60371 365 aaPredicted RBP2.68□□□□□ -1.98
PROM1-220ENST00000540805 KRTAP9-6A0A140TA67 174 aa2.67□□□□□ -1.98
PROM1-220ENST00000540805 LRP2P98164 4655 aa2.67□□□□□ -1.98
PROM1-220ENST00000540805 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.99
PROM1-220ENST00000540805 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
PROM1-220ENST00000540805 KRTAP9-2Q9BYQ4 174 aa2.64□□□□□ -1.99
PROM1-220ENST00000540805 MT1HL1P0DM35 61 aa2.64□□□□□ -1.99
PROM1-220ENST00000540805 LORP23490 312 aaPredicted RBP2.64□□□□□ -1.99
PROM1-220ENST00000540805 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
PROM1-220ENST00000540805 RNF213Q63HN8 5207 aa2.63□□□□□ -1.99
PROM1-220ENST00000540805 TNP1P09430 55 aa2.6□□□□□ -1.99
PROM1-220ENST00000540805 KRTAP12-1P59990 96 aa2.58□□□□□ -2
PROM1-220ENST00000540805 MUC2Q02817 5179 aa2.57□□□□□ -2
PROM1-220ENST00000540805 FLGP20930 4061 aaPredicted RBP2.53□□□□□ -2
PROM1-220ENST00000540805 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
PROM1-220ENST00000540805 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
PROM1-220ENST00000540805 KRTAP4-1Q9BYQ7 146 aa2.46□□□□□ -2.02
PROM1-220ENST00000540805 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
PROM1-220ENST00000540805 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
PROM1-220ENST00000540805 LOC100996750A0A140TA64 210 aa2.35□□□□□ -2.03
PROM1-220ENST00000540805 KRTAP4-6Q9BYQ5 205 aa2.35□□□□□ -2.03
PROM1-220ENST00000540805 KRTAP9-7A8MTY7 169 aa2.34□□□□□ -2.04
PROM1-220ENST00000540805 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.31□□□□□ -2.04
PROM1-220ENST00000540805 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
PROM1-220ENST00000540805 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
PROM1-220ENST00000540805 KRTAP23-1A1A580 65 aa2.27□□□□□ -2.05
PROM1-220ENST00000540805 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
PROM1-220ENST00000540805 INE1O15225 51 aa2.24□□□□□ -2.05
PROM1-220ENST00000540805 FSIP2Q5CZC0 6907 aa2.22□□□□□ -2.05
PROM1-220ENST00000540805 MT1HP80294 61 aa2.21□□□□□ -2.06
PROM1-220ENST00000540805 KRTAP10-12P60413 245 aa2.19□□□□□ -2.06
PROM1-220ENST00000540805 KRTAP4-8Q9BYQ9 185 aa2.18□□□□□ -2.06
PROM1-220ENST00000540805 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
PROM1-220ENST00000540805 KRTAP9-8Q9BYQ0 159 aa2.18□□□□□ -2.06
PROM1-220ENST00000540805 KRTAP19-1Q8IUB9 90 aa2.16□□□□□ -2.06
PROM1-220ENST00000540805 MT1FP04733 61 aa2.14□□□□□ -2.07
PROM1-220ENST00000540805 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
PROM1-220ENST00000540805 MT2AP02795 61 aa2.13□□□□□ -2.07
PROM1-220ENST00000540805 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
PROM1-220ENST00000540805 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
PROM1-220ENST00000540805 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
PROM1-220ENST00000540805 KRTAP8-1Q8IUC2 63 aa2.13□□□□□ -2.07
PROM1-220ENST00000540805 FCGBPQ9Y6R7 5405 aaPredicted RBP2.12□□□□□ -2.07
PROM1-220ENST00000540805 USH2AO75445 5202 aa2.11□□□□□ -2.07
PROM1-220ENST00000540805 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
PROM1-220ENST00000540805 KRTAP9-4Q9BYQ2 154 aa2.1□□□□□ -2.07
PROM1-220ENST00000540805 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
PROM1-220ENST00000540805 NEBP20929 6669 aa2.09□□□□□ -2.07
PROM1-220ENST00000540805 LCE4AQ5TA78 99 aa2.09□□□□□ -2.08
PROM1-220ENST00000540805 KMT2DO14686 5537 aa2.08□□□□□ -2.08
PROM1-220ENST00000540805 KRTAP9-3Q9BYQ3 159 aa2.08□□□□□ -2.08
PROM1-220ENST00000540805 KRTAP19-8Q3LI54 63 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms