RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-215ENST00000540783 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
RAPGEF4-215ENST00000540783 TPRXLQ17RH7 258 aa3.11□□□□□ -1.91
RAPGEF4-215ENST00000540783 KRTAP10-4P60372 401 aaPredicted RBP3.1□□□□□ -1.91
RAPGEF4-215ENST00000540783 KIAA1109Q2LD37 5005 aa3.1□□□□□ -1.91
RAPGEF4-215ENST00000540783 H0YAA0 97 aa3.09□□□□□ -1.91
RAPGEF4-215ENST00000540783 LCE2CQ5TA81 110 aa3.09□□□□□ -1.91
RAPGEF4-215ENST00000540783 RYR1P21817 5038 aa3.07□□□□□ -1.92
RAPGEF4-215ENST00000540783 VPS13BQ7Z7G8 4022 aa3.07□□□□□ -1.92
RAPGEF4-215ENST00000540783 MT1HL1P0DM35 61 aa3.06□□□□□ -1.92
RAPGEF4-215ENST00000540783 A8MUU9 505 aa3.06□□□□□ -1.92
RAPGEF4-215ENST00000540783 A0A1B0GU33 70 aa3.05□□□□□ -1.92
RAPGEF4-215ENST00000540783 RPL37P61927 97 aaKnown RBP3.04□□□□□ -1.92
RAPGEF4-215ENST00000540783 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
RAPGEF4-215ENST00000540783 KRTAP3-1Q9BYR8 98 aa3.03□□□□□ -1.92
RAPGEF4-215ENST00000540783 H1FX-AS1Q4G0G2 97 aa3.02□□□□□ -1.93
RAPGEF4-215ENST00000540783 ROMO1P60602 79 aa3.01□□□□□ -1.93
RAPGEF4-215ENST00000540783 M0R2T5 61 aa3.01□□□□□ -1.93
RAPGEF4-215ENST00000540783 XP32Q5T750 250 aa3□□□□□ -1.93
RAPGEF4-215ENST00000540783 C20orf166-AS1Q96NR2 134 aa3□□□□□ -1.93
RAPGEF4-215ENST00000540783 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
RAPGEF4-215ENST00000540783 LCE2AQ5TA79 106 aaPredicted RBP2.98□□□□□ -1.93
RAPGEF4-215ENST00000540783 A0A0D9SG42 100 aa2.97□□□□□ -1.93
RAPGEF4-215ENST00000540783 FAT1Q14517 4588 aa2.97□□□□□ -1.93
RAPGEF4-215ENST00000540783 K7ERS5 55 aa2.96□□□□□ -1.93
RAPGEF4-215ENST00000540783 PKHD1L1Q86WI1 4243 aa2.96□□□□□ -1.94
RAPGEF4-215ENST00000540783 APOBP04114 4563 aaKnown RBP2.96□□□□□ -1.94
RAPGEF4-215ENST00000540783 P0C880 135 aa2.96□□□□□ -1.94
RAPGEF4-215ENST00000540783 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
RAPGEF4-215ENST00000540783 KRTAP13-4Q3LI77 160 aa2.93□□□□□ -1.94
RAPGEF4-215ENST00000540783 DYNC1H1Q14204 4646 aaKnown RBP2.92□□□□□ -1.94
RAPGEF4-215ENST00000540783 SPINT4Q6UDR6 99 aa2.92□□□□□ -1.94
RAPGEF4-215ENST00000540783 FAT3Q8TDW7 4589 aa2.9□□□□□ -1.94
RAPGEF4-215ENST00000540783 HSPG2P98160 4391 aa2.9□□□□□ -1.95
RAPGEF4-215ENST00000540783 MYCBP2O75592 4640 aa2.9□□□□□ -1.95
RAPGEF4-215ENST00000540783 ABCA13Q86UQ4 5058 aa2.9□□□□□ -1.95
RAPGEF4-215ENST00000540783 KRTAP10-6P60371 365 aaPredicted RBP2.89□□□□□ -1.95
RAPGEF4-215ENST00000540783 KRTAP9-2Q9BYQ4 174 aa2.88□□□□□ -1.95
RAPGEF4-215ENST00000540783 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
RAPGEF4-215ENST00000540783 S4R3F8 94 aa2.88□□□□□ -1.95
RAPGEF4-215ENST00000540783 TNXBP22105 4242 aa2.87□□□□□ -1.95
RAPGEF4-215ENST00000540783 HERC1Q15751 4861 aa2.86□□□□□ -1.95
RAPGEF4-215ENST00000540783 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
RAPGEF4-215ENST00000540783 LORP23490 312 aaPredicted RBP2.85□□□□□ -1.95
RAPGEF4-215ENST00000540783 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.95
RAPGEF4-215ENST00000540783 KRTAP12-2P59991 146 aa2.84□□□□□ -1.96
RAPGEF4-215ENST00000540783 KRTAP15-1Q3LI76 137 aa2.8□□□□□ -1.96
RAPGEF4-215ENST00000540783 KRTAP23-1A1A580 65 aa2.78□□□□□ -1.96
RAPGEF4-215ENST00000540783 KRTAP12-1P59990 96 aa2.77□□□□□ -1.97
RAPGEF4-215ENST00000540783 LPAP08519 4548 aa2.77□□□□□ -1.97
RAPGEF4-215ENST00000540783 R4GN34 69 aa2.73□□□□□ -1.97
RAPGEF4-215ENST00000540783 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
RAPGEF4-215ENST00000540783 LRP2P98164 4655 aa2.72□□□□□ -1.97
RAPGEF4-215ENST00000540783 CRCT1Q9UGL9 99 aa2.69□□□□□ -1.98
RAPGEF4-215ENST00000540783 M0QZ58 72 aa2.69□□□□□ -1.98
RAPGEF4-215ENST00000540783 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
RAPGEF4-215ENST00000540783 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
RAPGEF4-215ENST00000540783 FSIP2Q5CZC0 6907 aa2.67□□□□□ -1.98
RAPGEF4-215ENST00000540783 CAMK2N1Q7Z7J9 78 aa2.64□□□□□ -1.99
RAPGEF4-215ENST00000540783 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
RAPGEF4-215ENST00000540783 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
RAPGEF4-215ENST00000540783 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
RAPGEF4-215ENST00000540783 KRTAP9-7A8MTY7 169 aa2.62□□□□□ -1.99
RAPGEF4-215ENST00000540783 MT1HP80294 61 aa2.6□□□□□ -1.99
RAPGEF4-215ENST00000540783 PRO2289Q9P1D8 64 aa2.59□□□□□ -2
RAPGEF4-215ENST00000540783 FAT4Q6V0I7 4981 aa2.59□□□□□ -2
RAPGEF4-215ENST00000540783 MUC2Q02817 5179 aa2.57□□□□□ -2
RAPGEF4-215ENST00000540783 MUC17Q685J3 4493 aa2.55□□□□□ -2
RAPGEF4-215ENST00000540783 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.52□□□□□ -2.01
RAPGEF4-215ENST00000540783 FLGP20930 4061 aaPredicted RBP2.5□□□□□ -2.01
RAPGEF4-215ENST00000540783 MT2AP02795 61 aa2.5□□□□□ -2.01
RAPGEF4-215ENST00000540783 LOC100996750A0A140TA64 210 aa2.48□□□□□ -2.01
RAPGEF4-215ENST00000540783 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
RAPGEF4-215ENST00000540783 KRTAP4-6Q9BYQ5 205 aa2.48□□□□□ -2.01
RAPGEF4-215ENST00000540783 KRTAP19-2Q3LHN2 52 aa2.46□□□□□ -2.02
RAPGEF4-215ENST00000540783 MT1FP04733 61 aa2.44□□□□□ -2.02
RAPGEF4-215ENST00000540783 TNP1P09430 55 aa2.43□□□□□ -2.02
RAPGEF4-215ENST00000540783 KRTAP9-8Q9BYQ0 159 aa2.41□□□□□ -2.02
RAPGEF4-215ENST00000540783 SPRR2GQ9BYE4 73 aa2.41□□□□□ -2.02
RAPGEF4-215ENST00000540783 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
RAPGEF4-215ENST00000540783 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
RAPGEF4-215ENST00000540783 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
RAPGEF4-215ENST00000540783 KRTAP9-3Q9BYQ3 159 aa2.35□□□□□ -2.03
RAPGEF4-215ENST00000540783 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
RAPGEF4-215ENST00000540783 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
RAPGEF4-215ENST00000540783 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
RAPGEF4-215ENST00000540783 KRTAP19-1Q8IUB9 90 aa2.31□□□□□ -2.04
RAPGEF4-215ENST00000540783 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
RAPGEF4-215ENST00000540783 KRTAP19-6Q3LI70 58 aa2.26□□□□□ -2.05
RAPGEF4-215ENST00000540783 SYNE2Q8WXH0 6885 aaKnown RBP2.26□□□□□ -2.05
RAPGEF4-215ENST00000540783 MT1BP07438 61 aa2.25□□□□□ -2.05
RAPGEF4-215ENST00000540783 KRTAP10-12P60413 245 aa2.25□□□□□ -2.05
RAPGEF4-215ENST00000540783 KRTAP8-1Q8IUC2 63 aa2.25□□□□□ -2.05
RAPGEF4-215ENST00000540783 LCE4AQ5TA78 99 aa2.23□□□□□ -2.05
RAPGEF4-215ENST00000540783 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
RAPGEF4-215ENST00000540783 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
RAPGEF4-215ENST00000540783 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
RAPGEF4-215ENST00000540783 INE1O15225 51 aa2.17□□□□□ -2.06
RAPGEF4-215ENST00000540783 NEBP20929 6669 aa2.17□□□□□ -2.06
RAPGEF4-215ENST00000540783 MT1XP80297 61 aa2.17□□□□□ -2.06
RAPGEF4-215ENST00000540783 USH2AO75445 5202 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms