RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
LRP6-205ENST00000540527 TENM1Q9UKZ4 2725 aa3.12□□□□□ -1.91
LRP6-205ENST00000540527 KIAA1109Q2LD37 5005 aa3.11□□□□□ -1.91
LRP6-205ENST00000540527 DEFB124Q8NES8 71 aa3.11□□□□□ -1.91
LRP6-205ENST00000540527 AKAP6Q13023 2319 aa3.1□□□□□ -1.91
LRP6-205ENST00000540527 KMT2CQ8NEZ4 4911 aaKnown RBP3.1□□□□□ -1.91
LRP6-205ENST00000540527 LAMA1P25391 3075 aa3.09□□□□□ -1.91
LRP6-205ENST00000540527 ATMQ13315 3056 aa3.09□□□□□ -1.91
LRP6-205ENST00000540527 MEGF8Q7Z7M0 2845 aa3.08□□□□□ -1.92
LRP6-205ENST00000540527 PRRC2CQ9Y520 2896 aaKnown RBP3.08□□□□□ -1.92
LRP6-205ENST00000540527 CSMD2Q7Z408 3487 aa3.08□□□□□ -1.92
LRP6-205ENST00000540527 HTN3P15516 51 aa3.07□□□□□ -1.92
LRP6-205ENST00000540527 DCHS2Q6V1P9 2916 aa3.06□□□□□ -1.92
LRP6-205ENST00000540527 CSPG4Q6UVK1 2322 aa3.05□□□□□ -1.92
LRP6-205ENST00000540527 APCP25054 2843 aa3.05□□□□□ -1.92
LRP6-205ENST00000540527 AKAP9Q99996 3911 aa3.04□□□□□ -1.92
LRP6-205ENST00000540527 NBASA2RRP1 2371 aa3.03□□□□□ -1.92
LRP6-205ENST00000540527 PRLHP81277 87 aa3.03□□□□□ -1.92
LRP6-205ENST00000540527 MAP1AP78559 2803 aaPredicted RBP3.01□□□□□ -1.93
LRP6-205ENST00000540527 ACACAQ13085 2346 aa3.01□□□□□ -1.93
LRP6-205ENST00000540527 DEFB135Q30KP9 77 aa3.01□□□□□ -1.93
LRP6-205ENST00000540527 MGAM2Q2M2H8 2515 aa3□□□□□ -1.93
LRP6-205ENST00000540527 TACC2O95359 2948 aa3□□□□□ -1.93
LRP6-205ENST00000540527 CUBNO60494 3623 aa3□□□□□ -1.93
LRP6-205ENST00000540527 LCE3AQ5TA76 89 aa3□□□□□ -1.93
LRP6-205ENST00000540527 ZANQ9Y493 2812 aa2.99□□□□□ -1.93
LRP6-205ENST00000540527 RYR2Q92736 4967 aa2.99□□□□□ -1.93
LRP6-205ENST00000540527 NSD1Q96L73 2696 aaPredicted RBP2.97□□□□□ -1.93
LRP6-205ENST00000540527 BSNQ9UPA5 3926 aa2.95□□□□□ -1.94
LRP6-205ENST00000540527 A0A096LNI7 61 aa2.95□□□□□ -1.94
LRP6-205ENST00000540527 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
LRP6-205ENST00000540527 DEFB4AO15263 64 aa2.94□□□□□ -1.94
LRP6-205ENST00000540527 ACANP16112 2415 aa2.93□□□□□ -1.94
LRP6-205ENST00000540527 HERC2O95714 4834 aa2.93□□□□□ -1.94
LRP6-205ENST00000540527 SPINK1P00995 79 aa2.92□□□□□ -1.94
LRP6-205ENST00000540527 SPINK6Q6UWN8 80 aa2.92□□□□□ -1.94
LRP6-205ENST00000540527 MUC2Q02817 5179 aa2.9□□□□□ -1.94
LRP6-205ENST00000540527 TENM3Q9P273 2699 aa2.9□□□□□ -1.95
LRP6-205ENST00000540527 TENM2Q9NT68 2774 aa2.89□□□□□ -1.95
LRP6-205ENST00000540527 MXRA5Q9NR99 2828 aa2.88□□□□□ -1.95
LRP6-205ENST00000540527 VPS13CQ709C8 3753 aa2.87□□□□□ -1.95
LRP6-205ENST00000540527 ANK2Q01484 3957 aa2.85□□□□□ -1.95
LRP6-205ENST00000540527 HERC1Q15751 4861 aa2.8□□□□□ -1.96
LRP6-205ENST00000540527 RPS29P62273 56 aaKnown RBP2.8□□□□□ -1.96
LRP6-205ENST00000540527 ABCA13Q86UQ4 5058 aa2.8□□□□□ -1.96
LRP6-205ENST00000540527 HRNRQ86YZ3 2850 aaPredicted RBP2.8□□□□□ -1.96
LRP6-205ENST00000540527 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
LRP6-205ENST00000540527 SONP18583 2426 aaKnown RBP2.79□□□□□ -1.96
LRP6-205ENST00000540527 SVEP1Q4LDE5 3571 aa2.76□□□□□ -1.97
LRP6-205ENST00000540527 S4R3F8 94 aa2.76□□□□□ -1.97
LRP6-205ENST00000540527 M0QZ58 72 aa2.75□□□□□ -1.97
LRP6-205ENST00000540527 SMR3AQ99954 134 aa2.75□□□□□ -1.97
LRP6-205ENST00000540527 CSMD3Q7Z407 3707 aa2.74□□□□□ -1.97
LRP6-205ENST00000540527 PRKDCP78527 4128 aaKnown RBP2.73□□□□□ -1.97
LRP6-205ENST00000540527 ZNF469Q96JG9 3925 aaPredicted RBP2.71□□□□□ -1.98
LRP6-205ENST00000540527 COL7A1Q02388 2944 aa2.69□□□□□ -1.98
LRP6-205ENST00000540527 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
LRP6-205ENST00000540527 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
LRP6-205ENST00000540527 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
LRP6-205ENST00000540527 TRRAPQ9Y4A5 3859 aa2.65□□□□□ -1.98
LRP6-205ENST00000540527 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
LRP6-205ENST00000540527 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
LRP6-205ENST00000540527 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
LRP6-205ENST00000540527 RNF213Q63HN8 5207 aa2.63□□□□□ -1.99
LRP6-205ENST00000540527 FSIP2Q5CZC0 6907 aa2.6□□□□□ -1.99
LRP6-205ENST00000540527 FAT4Q6V0I7 4981 aa2.6□□□□□ -1.99
LRP6-205ENST00000540527 STAB2Q8WWQ8 2551 aa2.59□□□□□ -1.99
LRP6-205ENST00000540527 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
LRP6-205ENST00000540527 SRRM2Q9UQ35 2752 aaKnown RBP2.58□□□□□ -2
LRP6-205ENST00000540527 DYNC2H1Q8NCM8 4307 aaKnown RBP2.58□□□□□ -2
LRP6-205ENST00000540527 DNAH1Q9P2D7 4330 aa2.54□□□□□ -2
LRP6-205ENST00000540527 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
LRP6-205ENST00000540527 HECTD4Q9Y4D8 3996 aa2.52□□□□□ -2.01
LRP6-205ENST00000540527 DMBT1Q9UGM3 2413 aaPredicted RBP2.52□□□□□ -2.01
LRP6-205ENST00000540527 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
LRP6-205ENST00000540527 C9orf92A6NGG3 77 aa2.49□□□□□ -2.01
LRP6-205ENST00000540527 CMYA5Q8N3K9 4069 aa2.48□□□□□ -2.01
LRP6-205ENST00000540527 TNP1P09430 55 aa2.47□□□□□ -2.01
LRP6-205ENST00000540527 FRAS1Q86XX4 4008 aa2.45□□□□□ -2.02
LRP6-205ENST00000540527 LYSTQ99698 3801 aa2.42□□□□□ -2.02
LRP6-205ENST00000540527 ANK3Q12955 4377 aaKnown RBP2.42□□□□□ -2.02
LRP6-205ENST00000540527 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
LRP6-205ENST00000540527 VPS13DQ5THJ4 4388 aa2.41□□□□□ -2.02
LRP6-205ENST00000540527 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
LRP6-205ENST00000540527 DNAH3Q8TD57 4116 aa2.39□□□□□ -2.03
LRP6-205ENST00000540527 HMCN2Q8NDA2 5059 aa2.39□□□□□ -2.03
LRP6-205ENST00000540527 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
LRP6-205ENST00000540527 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
LRP6-205ENST00000540527 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
LRP6-205ENST00000540527 NEBP20929 6669 aa2.37□□□□□ -2.03
LRP6-205ENST00000540527 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
LRP6-205ENST00000540527 M0R2T5 61 aa2.34□□□□□ -2.03
LRP6-205ENST00000540527 PKHD1P08F94 4074 aa2.34□□□□□ -2.04
LRP6-205ENST00000540527 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
LRP6-205ENST00000540527 DNAH8Q96JB1 4490 aa2.32□□□□□ -2.04
LRP6-205ENST00000540527 DNAH6Q9C0G6 4158 aa2.31□□□□□ -2.04
LRP6-205ENST00000540527 DNAH7Q8WXX0 4024 aa2.29□□□□□ -2.04
LRP6-205ENST00000540527 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
LRP6-205ENST00000540527 DNAH10Q8IVF4 4471 aa2.27□□□□□ -2.05
LRP6-205ENST00000540527 HSPG2P98160 4391 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms