RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 A0A1B0GU33 70 aa7.17□□□□□ -1.26
BNIP3-202ENST00000540159 CSAG1Q6PB30 78 aa7.16□□□□□ -1.26
BNIP3-202ENST00000540159 KRTAP17-1Q9BYP8 105 aa7.16□□□□□ -1.26
BNIP3-202ENST00000540159 CRIPTQ9P021 101 aa7.15□□□□□ -1.27
BNIP3-202ENST00000540159 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
BNIP3-202ENST00000540159 KRTAP21-3Q3LHN1 58 aa7.12□□□□□ -1.27
BNIP3-202ENST00000540159 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
BNIP3-202ENST00000540159 LRP2P98164 4655 aa7.11□□□□□ -1.27
BNIP3-202ENST00000540159 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
BNIP3-202ENST00000540159 A0A0D9SG42 100 aa7.08□□□□□ -1.28
BNIP3-202ENST00000540159 RYR1P21817 5038 aa7.08□□□□□ -1.28
BNIP3-202ENST00000540159 XP32Q5T750 250 aa7.05□□□□□ -1.28
BNIP3-202ENST00000540159 EPPK1P58107 5090 aaKnown RBP7.03□□□□□ -1.28
BNIP3-202ENST00000540159 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
BNIP3-202ENST00000540159 ABCA13Q86UQ4 5058 aa7□□□□□ -1.29
BNIP3-202ENST00000540159 RPL37P61927 97 aaKnown RBP7□□□□□ -1.29
BNIP3-202ENST00000540159 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
BNIP3-202ENST00000540159 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
BNIP3-202ENST00000540159 S4R3F8 94 aa6.94□□□□□ -1.3
BNIP3-202ENST00000540159 P0C880 135 aa6.94□□□□□ -1.3
BNIP3-202ENST00000540159 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
BNIP3-202ENST00000540159 MT1HL1P0DM35 61 aa6.9□□□□□ -1.3
BNIP3-202ENST00000540159 K7ERS5 55 aa6.89□□□□□ -1.31
BNIP3-202ENST00000540159 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
BNIP3-202ENST00000540159 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
BNIP3-202ENST00000540159 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
BNIP3-202ENST00000540159 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
BNIP3-202ENST00000540159 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
BNIP3-202ENST00000540159 MUC2Q02817 5179 aa6.77□□□□□ -1.33
BNIP3-202ENST00000540159 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
BNIP3-202ENST00000540159 ROMO1P60602 79 aa6.73□□□□□ -1.33
BNIP3-202ENST00000540159 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
BNIP3-202ENST00000540159 TPRXLQ17RH7 258 aa6.65□□□□□ -1.34
BNIP3-202ENST00000540159 HERC2O95714 4834 aa6.62□□□□□ -1.35
BNIP3-202ENST00000540159 KRTAP12-1P59990 96 aa6.61□□□□□ -1.35
BNIP3-202ENST00000540159 M0QZ58 72 aa6.58□□□□□ -1.36
BNIP3-202ENST00000540159 J3QL48 77 aa6.56□□□□□ -1.36
BNIP3-202ENST00000540159 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
BNIP3-202ENST00000540159 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
BNIP3-202ENST00000540159 R4GN34 69 aa6.53□□□□□ -1.36
BNIP3-202ENST00000540159 MUC17Q685J3 4493 aa6.53□□□□□ -1.36
BNIP3-202ENST00000540159 HERC1Q15751 4861 aa6.47□□□□□ -1.37
BNIP3-202ENST00000540159 SEC61BP60468 96 aaKnown RBP6.44□□□□□ -1.38
BNIP3-202ENST00000540159 FAT4Q6V0I7 4981 aa6.42□□□□□ -1.38
BNIP3-202ENST00000540159 PCLOQ9Y6V0 5065 aa6.33□□□□□ -1.4
BNIP3-202ENST00000540159 RNF213Q63HN8 5207 aa6.3□□□□□ -1.4
BNIP3-202ENST00000540159 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
BNIP3-202ENST00000540159 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
BNIP3-202ENST00000540159 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
BNIP3-202ENST00000540159 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
BNIP3-202ENST00000540159 BIRC6Q9NR09 4857 aa6.18□□□□□ -1.42
BNIP3-202ENST00000540159 FLGP20930 4061 aaPredicted RBP6.17□□□□□ -1.42
BNIP3-202ENST00000540159 UBR4Q5T4S7 5183 aa6.14□□□□□ -1.43
BNIP3-202ENST00000540159 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
BNIP3-202ENST00000540159 M0R2T5 61 aa6.04□□□□□ -1.44
BNIP3-202ENST00000540159 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
BNIP3-202ENST00000540159 LUZP6Q538Z0 58 aa5.93□□□□□ -1.46
BNIP3-202ENST00000540159 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
BNIP3-202ENST00000540159 TNP1P09430 55 aa5.86□□□□□ -1.47
BNIP3-202ENST00000540159 KRTAP10-10P60014 251 aa5.82□□□□□ -1.48
BNIP3-202ENST00000540159 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
BNIP3-202ENST00000540159 MT1HP80294 61 aa5.79□□□□□ -1.48
BNIP3-202ENST00000540159 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
BNIP3-202ENST00000540159 MT1FP04733 61 aa5.76□□□□□ -1.49
BNIP3-202ENST00000540159 MT2AP02795 61 aa5.71□□□□□ -1.5
BNIP3-202ENST00000540159 SPRR2GQ9BYE4 73 aa5.71□□□□□ -1.5
BNIP3-202ENST00000540159 USH2AO75445 5202 aa5.68□□□□□ -1.5
BNIP3-202ENST00000540159 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
BNIP3-202ENST00000540159 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
BNIP3-202ENST00000540159 KMT2DO14686 5537 aa5.56□□□□□ -1.52
BNIP3-202ENST00000540159 MT1BP07438 61 aa5.49□□□□□ -1.53
BNIP3-202ENST00000540159 KRTAP10-5P60370 271 aa5.46□□□□□ -1.53
BNIP3-202ENST00000540159 MT1XP80297 61 aa5.46□□□□□ -1.54
BNIP3-202ENST00000540159 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
BNIP3-202ENST00000540159 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
BNIP3-202ENST00000540159 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
BNIP3-202ENST00000540159 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
BNIP3-202ENST00000540159 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
BNIP3-202ENST00000540159 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
BNIP3-202ENST00000540159 FSIP2Q5CZC0 6907 aa5.36□□□□□ -1.55
BNIP3-202ENST00000540159 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
BNIP3-202ENST00000540159 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
BNIP3-202ENST00000540159 LCE2BO14633 110 aa5.26□□□□□ -1.57
BNIP3-202ENST00000540159 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
BNIP3-202ENST00000540159 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
BNIP3-202ENST00000540159 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
BNIP3-202ENST00000540159 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
BNIP3-202ENST00000540159 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
BNIP3-202ENST00000540159 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
BNIP3-202ENST00000540159 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
BNIP3-202ENST00000540159 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.61
BNIP3-202ENST00000540159 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
BNIP3-202ENST00000540159 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
BNIP3-202ENST00000540159 DSTQ03001 7570 aaKnown RBP4.87□□□□□ -1.63
BNIP3-202ENST00000540159 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
BNIP3-202ENST00000540159 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.63
BNIP3-202ENST00000540159 MT1LQ93083 61 aa4.7□□□□□ -1.66
BNIP3-202ENST00000540159 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
BNIP3-202ENST00000540159 MT1EP04732 61 aa4.7□□□□□ -1.66
BNIP3-202ENST00000540159 INE1O15225 51 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms