RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 UQCR11O14957 56 aa9.36□□□□□ -0.91
PCDHB17P-201ENST00000539533 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
PCDHB17P-201ENST00000539533 ABCA13Q86UQ4 5058 aa9.33□□□□□ -0.92
PCDHB17P-201ENST00000539533 HERC2O95714 4834 aa9.3□□□□□ -0.92
PCDHB17P-201ENST00000539533 CSAG1Q6PB30 78 aa9.25□□□□□ -0.93
PCDHB17P-201ENST00000539533 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
PCDHB17P-201ENST00000539533 A8MUU9 505 aa9.22□□□□□ -0.93
PCDHB17P-201ENST00000539533 H3BS24 57 aa9.16□□□□□ -0.94
PCDHB17P-201ENST00000539533 J3QL48 77 aa9.12□□□□□ -0.95
PCDHB17P-201ENST00000539533 XP32Q5T750 250 aa9.09□□□□□ -0.95
PCDHB17P-201ENST00000539533 LPAP08519 4548 aa9.05□□□□□ -0.96
PCDHB17P-201ENST00000539533 RPL37P61927 97 aaKnown RBP9.04□□□□□ -0.96
PCDHB17P-201ENST00000539533 TPRXLQ17RH7 258 aa9.01□□□□□ -0.97
PCDHB17P-201ENST00000539533 LRP2P98164 4655 aa8.99□□□□□ -0.97
PCDHB17P-201ENST00000539533 PCLOQ9Y6V0 5065 aa8.96□□□□□ -0.97
PCDHB17P-201ENST00000539533 H0YAA0 97 aa8.96□□□□□ -0.98
PCDHB17P-201ENST00000539533 KRTAP25-1Q3LHN0 102 aa8.92□□□□□ -0.98
PCDHB17P-201ENST00000539533 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.98
PCDHB17P-201ENST00000539533 A0A1B0GU33 70 aa8.85□□□□□ -0.99
PCDHB17P-201ENST00000539533 HERC1Q15751 4861 aa8.84□□□□□ -0.99
PCDHB17P-201ENST00000539533 ROMO1P60602 79 aa8.81□□□□□ -1
PCDHB17P-201ENST00000539533 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
PCDHB17P-201ENST00000539533 CRIPTQ9P021 101 aa8.74□□□□□ -1.01
PCDHB17P-201ENST00000539533 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
PCDHB17P-201ENST00000539533 SEC61BP60468 96 aaKnown RBP8.69□□□□□ -1.02
PCDHB17P-201ENST00000539533 K7ERS5 55 aa8.68□□□□□ -1.02
PCDHB17P-201ENST00000539533 HMCN2Q8NDA2 5059 aa8.68□□□□□ -1.02
PCDHB17P-201ENST00000539533 MUC17Q685J3 4493 aa8.61□□□□□ -1.03
PCDHB17P-201ENST00000539533 KRTAP4-1Q9BYQ7 146 aa8.61□□□□□ -1.03
PCDHB17P-201ENST00000539533 P0C880 135 aa8.58□□□□□ -1.04
PCDHB17P-201ENST00000539533 MUC2Q02817 5179 aa8.52□□□□□ -1.05
PCDHB17P-201ENST00000539533 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
PCDHB17P-201ENST00000539533 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
PCDHB17P-201ENST00000539533 S4R3F8 94 aa8.45□□□□□ -1.06
PCDHB17P-201ENST00000539533 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
PCDHB17P-201ENST00000539533 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
PCDHB17P-201ENST00000539533 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
PCDHB17P-201ENST00000539533 A0A0D9SG42 100 aa8.42□□□□□ -1.06
PCDHB17P-201ENST00000539533 KRTAP19-2Q3LHN2 52 aa8.36□□□□□ -1.07
PCDHB17P-201ENST00000539533 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.07
PCDHB17P-201ENST00000539533 UBR4Q5T4S7 5183 aa8.32□□□□□ -1.08
PCDHB17P-201ENST00000539533 RNF213Q63HN8 5207 aa8.24□□□□□ -1.09
PCDHB17P-201ENST00000539533 NDUFAF8A1L188 74 aa8.23□□□□□ -1.09
PCDHB17P-201ENST00000539533 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
PCDHB17P-201ENST00000539533 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
PCDHB17P-201ENST00000539533 FLGP20930 4061 aaPredicted RBP8.16□□□□□ -1.1
PCDHB17P-201ENST00000539533 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
PCDHB17P-201ENST00000539533 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
PCDHB17P-201ENST00000539533 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
PCDHB17P-201ENST00000539533 M0QZ58 72 aa8.04□□□□□ -1.12
PCDHB17P-201ENST00000539533 MT1HP80294 61 aa7.95□□□□□ -1.14
PCDHB17P-201ENST00000539533 M0R2T5 61 aa7.89□□□□□ -1.15
PCDHB17P-201ENST00000539533 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
PCDHB17P-201ENST00000539533 R4GN34 69 aa7.81□□□□□ -1.16
PCDHB17P-201ENST00000539533 PLAC4Q8WY50 150 aa7.68□□□□□ -1.18
PCDHB17P-201ENST00000539533 KRTAP9-8Q9BYQ0 159 aa7.68□□□□□ -1.18
PCDHB17P-201ENST00000539533 MT2AP02795 61 aa7.66□□□□□ -1.18
PCDHB17P-201ENST00000539533 MT1FP04733 61 aa7.63□□□□□ -1.19
PCDHB17P-201ENST00000539533 KRTAP10-10P60014 251 aa7.6□□□□□ -1.19
PCDHB17P-201ENST00000539533 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
PCDHB17P-201ENST00000539533 A0A0A0MQY5 61 aa7.55□□□□□ -1.2
PCDHB17P-201ENST00000539533 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
PCDHB17P-201ENST00000539533 KRTAP19-1Q8IUB9 90 aa7.53□□□□□ -1.2
PCDHB17P-201ENST00000539533 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
PCDHB17P-201ENST00000539533 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
PCDHB17P-201ENST00000539533 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
PCDHB17P-201ENST00000539533 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
PCDHB17P-201ENST00000539533 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
PCDHB17P-201ENST00000539533 MT1BP07438 61 aa7.23□□□□□ -1.25
PCDHB17P-201ENST00000539533 LCE2BO14633 110 aa7.19□□□□□ -1.26
PCDHB17P-201ENST00000539533 TNP1P09430 55 aa7.18□□□□□ -1.26
PCDHB17P-201ENST00000539533 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
PCDHB17P-201ENST00000539533 USH2AO75445 5202 aa7.07□□□□□ -1.28
PCDHB17P-201ENST00000539533 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
PCDHB17P-201ENST00000539533 MT1XP80297 61 aa7.02□□□□□ -1.29
PCDHB17P-201ENST00000539533 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
PCDHB17P-201ENST00000539533 LCE2DQ5TA82 110 aaPredicted RBP6.98□□□□□ -1.29
PCDHB17P-201ENST00000539533 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
PCDHB17P-201ENST00000539533 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
PCDHB17P-201ENST00000539533 SSPOA2VEC9 5147 aa6.8□□□□□ -1.32
PCDHB17P-201ENST00000539533 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
PCDHB17P-201ENST00000539533 KRTAP10-7P60409 375 aaPredicted RBP6.77□□□□□ -1.32
PCDHB17P-201ENST00000539533 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
PCDHB17P-201ENST00000539533 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
PCDHB17P-201ENST00000539533 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
PCDHB17P-201ENST00000539533 KMT2DO14686 5537 aa6.58□□□□□ -1.36
PCDHB17P-201ENST00000539533 INE1O15225 51 aa6.54□□□□□ -1.36
PCDHB17P-201ENST00000539533 KRTAP4-8A0A0G2JLE6 195 aa6.52□□□□□ -1.37
PCDHB17P-201ENST00000539533 KRTAP9-2Q9BYQ4 174 aa6.52□□□□□ -1.37
PCDHB17P-201ENST00000539533 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
PCDHB17P-201ENST00000539533 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
PCDHB17P-201ENST00000539533 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
PCDHB17P-201ENST00000539533 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
PCDHB17P-201ENST00000539533 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
PCDHB17P-201ENST00000539533 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
PCDHB17P-201ENST00000539533 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
PCDHB17P-201ENST00000539533 MT1EP04732 61 aa6.13□□□□□ -1.43
PCDHB17P-201ENST00000539533 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
PCDHB17P-201ENST00000539533 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
PCDHB17P-201ENST00000539533 MT1LQ93083 61 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms