RNA–Protein interactions for RNA: ENST00000539476.5

PITPNA-202, Transcript of phosphatidylinositol transfer protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PITPNA, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNA-202ENST00000539476 KRTAP3-1Q9BYR8 98 aa9.18□□□□□ -0.94
PITPNA-202ENST00000539476 HSPG2P98160 4391 aa9.15□□□□□ -0.95
PITPNA-202ENST00000539476 RPL37P61927 97 aaKnown RBP9.11□□□□□ -0.95
PITPNA-202ENST00000539476 PKHD1L1Q86WI1 4243 aa9.11□□□□□ -0.95
PITPNA-202ENST00000539476 NDUFAF8A1L188 74 aa9.07□□□□□ -0.96
PITPNA-202ENST00000539476 P0C880 135 aa9.07□□□□□ -0.96
PITPNA-202ENST00000539476 RYR1P21817 5038 aa9.06□□□□□ -0.96
PITPNA-202ENST00000539476 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
PITPNA-202ENST00000539476 KRTAP17-1Q9BYP8 105 aa9.03□□□□□ -0.96
PITPNA-202ENST00000539476 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
PITPNA-202ENST00000539476 C20orf166-AS1Q96NR2 134 aa8.97□□□□□ -0.97
PITPNA-202ENST00000539476 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.98
PITPNA-202ENST00000539476 KRTAP13-4Q3LI77 160 aa8.95□□□□□ -0.98
PITPNA-202ENST00000539476 TPRXLQ17RH7 258 aa8.95□□□□□ -0.98
PITPNA-202ENST00000539476 TNXBP22105 4242 aa8.92□□□□□ -0.98
PITPNA-202ENST00000539476 S4R3F8 94 aa8.9□□□□□ -0.99
PITPNA-202ENST00000539476 Q5VSD8 79 aa8.88□□□□□ -0.99
PITPNA-202ENST00000539476 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
PITPNA-202ENST00000539476 MYCBP2O75592 4640 aa8.83□□□□□ -1
PITPNA-202ENST00000539476 RPS29P62273 56 aaKnown RBP8.81□□□□□ -1
PITPNA-202ENST00000539476 KRTAP10-6P60371 365 aaPredicted RBP8.79□□□□□ -1
PITPNA-202ENST00000539476 KRTAP10-8P60410 259 aa8.76□□□□□ -1.01
PITPNA-202ENST00000539476 KRTAP12-2P59991 146 aa8.75□□□□□ -1.01
PITPNA-202ENST00000539476 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
PITPNA-202ENST00000539476 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.02
PITPNA-202ENST00000539476 MT1HL1P0DM35 61 aa8.65□□□□□ -1.03
PITPNA-202ENST00000539476 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
PITPNA-202ENST00000539476 M0QZ58 72 aa8.57□□□□□ -1.04
PITPNA-202ENST00000539476 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
PITPNA-202ENST00000539476 XP32Q5T750 250 aa8.55□□□□□ -1.04
PITPNA-202ENST00000539476 BIRC6Q9NR09 4857 aa8.54□□□□□ -1.04
PITPNA-202ENST00000539476 KRTAP12-1P59990 96 aa8.53□□□□□ -1.04
PITPNA-202ENST00000539476 KRTAP15-1Q3LI76 137 aa8.51□□□□□ -1.05
PITPNA-202ENST00000539476 R4GN34 69 aa8.51□□□□□ -1.05
PITPNA-202ENST00000539476 HERC2O95714 4834 aa8.51□□□□□ -1.05
PITPNA-202ENST00000539476 LPAP08519 4548 aa8.36□□□□□ -1.07
PITPNA-202ENST00000539476 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
PITPNA-202ENST00000539476 LRP2P98164 4655 aa8.31□□□□□ -1.08
PITPNA-202ENST00000539476 LUZP6Q538Z0 58 aa8.29□□□□□ -1.08
PITPNA-202ENST00000539476 PLAC4Q8WY50 150 aa8.29□□□□□ -1.08
PITPNA-202ENST00000539476 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
PITPNA-202ENST00000539476 A0A0A0MQY5 61 aa8.22□□□□□ -1.09
PITPNA-202ENST00000539476 J3QL48 77 aa8.16□□□□□ -1.1
PITPNA-202ENST00000539476 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
PITPNA-202ENST00000539476 HERC1Q15751 4861 aa8.09□□□□□ -1.11
PITPNA-202ENST00000539476 MUC17Q685J3 4493 aa8.01□□□□□ -1.13
PITPNA-202ENST00000539476 HMCN2Q8NDA2 5059 aa7.98□□□□□ -1.13
PITPNA-202ENST00000539476 KRTAP4-1Q9BYQ7 146 aa7.92□□□□□ -1.14
PITPNA-202ENST00000539476 SEC61BP60468 96 aaKnown RBP7.86□□□□□ -1.15
PITPNA-202ENST00000539476 MUC2Q02817 5179 aa7.84□□□□□ -1.15
PITPNA-202ENST00000539476 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
PITPNA-202ENST00000539476 TNP1P09430 55 aa7.72□□□□□ -1.17
PITPNA-202ENST00000539476 PP632Q6XCG6 107 aa7.71□□□□□ -1.17
PITPNA-202ENST00000539476 M0R2T5 61 aa7.7□□□□□ -1.18
PITPNA-202ENST00000539476 UBR4Q5T4S7 5183 aa7.64□□□□□ -1.19
PITPNA-202ENST00000539476 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
PITPNA-202ENST00000539476 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
PITPNA-202ENST00000539476 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
PITPNA-202ENST00000539476 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
PITPNA-202ENST00000539476 MT1HP80294 61 aa7.26□□□□□ -1.25
PITPNA-202ENST00000539476 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
PITPNA-202ENST00000539476 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
PITPNA-202ENST00000539476 KRTAP9-8Q9BYQ0 159 aa7.04□□□□□ -1.28
PITPNA-202ENST00000539476 MT2AP02795 61 aa7.01□□□□□ -1.29
PITPNA-202ENST00000539476 MT1FP04733 61 aa7□□□□□ -1.29
PITPNA-202ENST00000539476 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
PITPNA-202ENST00000539476 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
PITPNA-202ENST00000539476 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
PITPNA-202ENST00000539476 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
PITPNA-202ENST00000539476 SPRR2GQ9BYE4 73 aa6.91□□□□□ -1.3
PITPNA-202ENST00000539476 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
PITPNA-202ENST00000539476 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
PITPNA-202ENST00000539476 KRTAP10-12P60413 245 aa6.77□□□□□ -1.33
PITPNA-202ENST00000539476 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
PITPNA-202ENST00000539476 INE1O15225 51 aa6.73□□□□□ -1.33
PITPNA-202ENST00000539476 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
PITPNA-202ENST00000539476 MT1BP07438 61 aa6.66□□□□□ -1.34
PITPNA-202ENST00000539476 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
PITPNA-202ENST00000539476 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
PITPNA-202ENST00000539476 LCE2BO14633 110 aa6.59□□□□□ -1.35
PITPNA-202ENST00000539476 KMT2DO14686 5537 aa6.57□□□□□ -1.36
PITPNA-202ENST00000539476 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
PITPNA-202ENST00000539476 MT1XP80297 61 aa6.53□□□□□ -1.36
PITPNA-202ENST00000539476 USH2AO75445 5202 aa6.52□□□□□ -1.37
PITPNA-202ENST00000539476 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
PITPNA-202ENST00000539476 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
PITPNA-202ENST00000539476 OBSCNQ5VST9 7968 aa6.39□□□□□ -1.39
PITPNA-202ENST00000539476 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
PITPNA-202ENST00000539476 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
PITPNA-202ENST00000539476 LCE3CQ5T5A8 94 aa6.29□□□□□ -1.4
PITPNA-202ENST00000539476 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
PITPNA-202ENST00000539476 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
PITPNA-202ENST00000539476 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
PITPNA-202ENST00000539476 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.43
PITPNA-202ENST00000539476 DSTQ03001 7570 aaKnown RBP6.12□□□□□ -1.43
PITPNA-202ENST00000539476 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
PITPNA-202ENST00000539476 LCE2DQ5TA82 110 aaPredicted RBP6.1□□□□□ -1.43
PITPNA-202ENST00000539476 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
PITPNA-202ENST00000539476 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
PITPNA-202ENST00000539476 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms