RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 ADM2Q7Z4H4 148 aa3.65□□□□□ -1.83
PROM1-219ENST00000539194 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
PROM1-219ENST00000539194 LCE2CQ5TA81 110 aa3.62□□□□□ -1.83
PROM1-219ENST00000539194 C9orf92A6NGG3 77 aa3.61□□□□□ -1.83
PROM1-219ENST00000539194 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
PROM1-219ENST00000539194 KRTAP10-6P60371 365 aaPredicted RBP3.59□□□□□ -1.84
PROM1-219ENST00000539194 COX6B2Q6YFQ2 88 aa3.59□□□□□ -1.84
PROM1-219ENST00000539194 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
PROM1-219ENST00000539194 Q5VSD8 79 aa3.56□□□□□ -1.84
PROM1-219ENST00000539194 ABCA13Q86UQ4 5058 aa3.55□□□□□ -1.84
PROM1-219ENST00000539194 MT1HL1P0DM35 61 aa3.54□□□□□ -1.84
PROM1-219ENST00000539194 RPL37P61927 97 aaKnown RBP3.54□□□□□ -1.84
PROM1-219ENST00000539194 LRP2P98164 4655 aa3.54□□□□□ -1.84
PROM1-219ENST00000539194 A0A1B0GU33 70 aa3.53□□□□□ -1.84
PROM1-219ENST00000539194 MUC17Q685J3 4493 aa3.53□□□□□ -1.84
PROM1-219ENST00000539194 EPPK1P58107 5090 aaKnown RBP3.53□□□□□ -1.84
PROM1-219ENST00000539194 XP32Q5T750 250 aa3.53□□□□□ -1.84
PROM1-219ENST00000539194 KRTAP13-4Q3LI77 160 aa3.53□□□□□ -1.84
PROM1-219ENST00000539194 KIAA1109Q2LD37 5005 aa3.53□□□□□ -1.85
PROM1-219ENST00000539194 H3BS24 57 aa3.52□□□□□ -1.85
PROM1-219ENST00000539194 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
PROM1-219ENST00000539194 LINC01554Q52M75 96 aa3.5□□□□□ -1.85
PROM1-219ENST00000539194 CSAG1Q6PB30 78 aa3.5□□□□□ -1.85
PROM1-219ENST00000539194 DMBT1Q9UGM3 2413 aaPredicted RBP3.46□□□□□ -1.86
PROM1-219ENST00000539194 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
PROM1-219ENST00000539194 P0C880 135 aa3.42□□□□□ -1.86
PROM1-219ENST00000539194 TPRXLQ17RH7 258 aa3.41□□□□□ -1.86
PROM1-219ENST00000539194 S4R3F8 94 aa3.41□□□□□ -1.86
PROM1-219ENST00000539194 BIRC6Q9NR09 4857 aa3.4□□□□□ -1.86
PROM1-219ENST00000539194 KRTAP19-2Q3LHN2 52 aa3.39□□□□□ -1.87
PROM1-219ENST00000539194 LORP23490 312 aaPredicted RBP3.39□□□□□ -1.87
PROM1-219ENST00000539194 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
PROM1-219ENST00000539194 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
PROM1-219ENST00000539194 KRTAP4-5Q9BYR2 181 aa3.37□□□□□ -1.87
PROM1-219ENST00000539194 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
PROM1-219ENST00000539194 ROMO1P60602 79 aa3.36□□□□□ -1.87
PROM1-219ENST00000539194 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
PROM1-219ENST00000539194 M0QZ58 72 aa3.28□□□□□ -1.88
PROM1-219ENST00000539194 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
PROM1-219ENST00000539194 K7ERS5 55 aa3.27□□□□□ -1.89
PROM1-219ENST00000539194 HERC2O95714 4834 aa3.27□□□□□ -1.89
PROM1-219ENST00000539194 A0A0D9SG42 100 aa3.27□□□□□ -1.89
PROM1-219ENST00000539194 MUC2Q02817 5179 aa3.26□□□□□ -1.89
PROM1-219ENST00000539194 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
PROM1-219ENST00000539194 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
PROM1-219ENST00000539194 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
PROM1-219ENST00000539194 HERC1Q15751 4861 aa3.21□□□□□ -1.9
PROM1-219ENST00000539194 HMCN2Q8NDA2 5059 aa3.18□□□□□ -1.9
PROM1-219ENST00000539194 SEC61BP60468 96 aaKnown RBP3.17□□□□□ -1.9
PROM1-219ENST00000539194 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
PROM1-219ENST00000539194 R4GN34 69 aa3.1□□□□□ -1.91
PROM1-219ENST00000539194 FAT4Q6V0I7 4981 aa3.07□□□□□ -1.92
PROM1-219ENST00000539194 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
PROM1-219ENST00000539194 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
PROM1-219ENST00000539194 UBR4Q5T4S7 5183 aa3.02□□□□□ -1.93
PROM1-219ENST00000539194 KRTAP23-1A1A580 65 aa3.02□□□□□ -1.93
PROM1-219ENST00000539194 SPRR2GQ9BYE4 73 aa3.02□□□□□ -1.93
PROM1-219ENST00000539194 KRTAP19-1Q8IUB9 90 aa3.01□□□□□ -1.93
PROM1-219ENST00000539194 M0R2T5 61 aa3□□□□□ -1.93
PROM1-219ENST00000539194 RNF213Q63HN8 5207 aa2.99□□□□□ -1.93
PROM1-219ENST00000539194 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
PROM1-219ENST00000539194 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
PROM1-219ENST00000539194 PLAC4Q8WY50 150 aa2.96□□□□□ -1.93
PROM1-219ENST00000539194 MT1HP80294 61 aa2.94□□□□□ -1.94
PROM1-219ENST00000539194 KRTAP9-8Q9BYQ0 159 aa2.93□□□□□ -1.94
PROM1-219ENST00000539194 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
PROM1-219ENST00000539194 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.95
PROM1-219ENST00000539194 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
PROM1-219ENST00000539194 MT1FP04733 61 aa2.9□□□□□ -1.95
PROM1-219ENST00000539194 KRTAP19-8Q3LI54 63 aa2.9□□□□□ -1.95
PROM1-219ENST00000539194 MT2AP02795 61 aa2.89□□□□□ -1.95
PROM1-219ENST00000539194 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
PROM1-219ENST00000539194 TNP1P09430 55 aa2.86□□□□□ -1.95
PROM1-219ENST00000539194 MT1BP07438 61 aa2.85□□□□□ -1.95
PROM1-219ENST00000539194 KRTAP10-5P60370 271 aa2.84□□□□□ -1.96
PROM1-219ENST00000539194 MT1XP80297 61 aa2.82□□□□□ -1.96
PROM1-219ENST00000539194 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
PROM1-219ENST00000539194 KRTAP9-3Q9BYQ3 159 aa2.8□□□□□ -1.96
PROM1-219ENST00000539194 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
PROM1-219ENST00000539194 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
PROM1-219ENST00000539194 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
PROM1-219ENST00000539194 KRTAP9-6A0A140TA67 174 aa2.71□□□□□ -1.98
PROM1-219ENST00000539194 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
PROM1-219ENST00000539194 KRTAP9-2Q9BYQ4 174 aa2.71□□□□□ -1.98
PROM1-219ENST00000539194 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
PROM1-219ENST00000539194 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
PROM1-219ENST00000539194 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
PROM1-219ENST00000539194 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
PROM1-219ENST00000539194 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
PROM1-219ENST00000539194 USH2AO75445 5202 aa2.63□□□□□ -1.99
PROM1-219ENST00000539194 KMT2DO14686 5537 aa2.61□□□□□ -1.99
PROM1-219ENST00000539194 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
PROM1-219ENST00000539194 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
PROM1-219ENST00000539194 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
PROM1-219ENST00000539194 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
PROM1-219ENST00000539194 SSPOA2VEC9 5147 aa2.55□□□□□ -2
PROM1-219ENST00000539194 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
PROM1-219ENST00000539194 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
PROM1-219ENST00000539194 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
PROM1-219ENST00000539194 PRO2289Q9P1D8 64 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms