RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SPATA8Q6RVD6 105 aa7.04□□□□□ -1.28
CDK5RAP3-202ENST00000536708 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
CDK5RAP3-202ENST00000536708 LPAP08519 4548 aa7.03□□□□□ -1.28
CDK5RAP3-202ENST00000536708 PRAC1Q96KF2 57 aa7.02□□□□□ -1.29
CDK5RAP3-202ENST00000536708 MIR22HGQ0VDD5 57 aa6.99□□□□□ -1.29
CDK5RAP3-202ENST00000536708 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
CDK5RAP3-202ENST00000536708 UQCR11O14957 56 aa6.97□□□□□ -1.29
CDK5RAP3-202ENST00000536708 C20orf166-AS1Q96NR2 134 aa6.97□□□□□ -1.29
CDK5RAP3-202ENST00000536708 A8MUU9 505 aa6.96□□□□□ -1.3
CDK5RAP3-202ENST00000536708 LRP2P98164 4655 aa6.93□□□□□ -1.3
CDK5RAP3-202ENST00000536708 XP32Q5T750 250 aa6.92□□□□□ -1.3
CDK5RAP3-202ENST00000536708 HMCN2Q8NDA2 5059 aa6.92□□□□□ -1.3
CDK5RAP3-202ENST00000536708 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
CDK5RAP3-202ENST00000536708 H3BS24 57 aa6.91□□□□□ -1.3
CDK5RAP3-202ENST00000536708 LINC01554Q52M75 96 aa6.86□□□□□ -1.31
CDK5RAP3-202ENST00000536708 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
CDK5RAP3-202ENST00000536708 KRTAP3-1Q9BYR8 98 aa6.79□□□□□ -1.32
CDK5RAP3-202ENST00000536708 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
CDK5RAP3-202ENST00000536708 UBR4Q5T4S7 5183 aa6.74□□□□□ -1.33
CDK5RAP3-202ENST00000536708 H0YAA0 97 aa6.71□□□□□ -1.34
CDK5RAP3-202ENST00000536708 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.34
CDK5RAP3-202ENST00000536708 MUC2Q02817 5179 aa6.68□□□□□ -1.34
CDK5RAP3-202ENST00000536708 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
CDK5RAP3-202ENST00000536708 MUC17Q685J3 4493 aa6.65□□□□□ -1.34
CDK5RAP3-202ENST00000536708 SEC61BP60468 96 aaKnown RBP6.64□□□□□ -1.35
CDK5RAP3-202ENST00000536708 A0A1B0GU33 70 aa6.64□□□□□ -1.35
CDK5RAP3-202ENST00000536708 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
CDK5RAP3-202ENST00000536708 RNF213Q63HN8 5207 aa6.61□□□□□ -1.35
CDK5RAP3-202ENST00000536708 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
CDK5RAP3-202ENST00000536708 KRTAP3-3Q9BYR6 98 aa6.52□□□□□ -1.37
CDK5RAP3-202ENST00000536708 K7ERS5 55 aa6.48□□□□□ -1.37
CDK5RAP3-202ENST00000536708 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
CDK5RAP3-202ENST00000536708 S4R3F8 94 aa6.44□□□□□ -1.38
CDK5RAP3-202ENST00000536708 ROMO1P60602 79 aa6.43□□□□□ -1.38
CDK5RAP3-202ENST00000536708 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
CDK5RAP3-202ENST00000536708 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
CDK5RAP3-202ENST00000536708 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
CDK5RAP3-202ENST00000536708 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
CDK5RAP3-202ENST00000536708 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
CDK5RAP3-202ENST00000536708 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
CDK5RAP3-202ENST00000536708 FLGP20930 4061 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-202ENST00000536708 A0A0D9SG42 100 aa6.27□□□□□ -1.4
CDK5RAP3-202ENST00000536708 P0C880 135 aa6.27□□□□□ -1.4
CDK5RAP3-202ENST00000536708 MT1HP80294 61 aa6.2□□□□□ -1.42
CDK5RAP3-202ENST00000536708 SPINT4Q6UDR6 99 aa6.17□□□□□ -1.42
CDK5RAP3-202ENST00000536708 M0QZ58 72 aa6.16□□□□□ -1.42
CDK5RAP3-202ENST00000536708 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
CDK5RAP3-202ENST00000536708 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
CDK5RAP3-202ENST00000536708 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
CDK5RAP3-202ENST00000536708 M0R2T5 61 aa6.1□□□□□ -1.43
CDK5RAP3-202ENST00000536708 A0A0A0MQY5 61 aa6.09□□□□□ -1.43
CDK5RAP3-202ENST00000536708 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
CDK5RAP3-202ENST00000536708 LCE2AQ5TA79 106 aaPredicted RBP6.04□□□□□ -1.44
CDK5RAP3-202ENST00000536708 NDUFAF8A1L188 74 aa5.95□□□□□ -1.46
CDK5RAP3-202ENST00000536708 R4GN34 69 aa5.95□□□□□ -1.46
CDK5RAP3-202ENST00000536708 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
CDK5RAP3-202ENST00000536708 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
CDK5RAP3-202ENST00000536708 MT2AP02795 61 aa5.93□□□□□ -1.46
CDK5RAP3-202ENST00000536708 MT1FP04733 61 aa5.91□□□□□ -1.46
CDK5RAP3-202ENST00000536708 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
CDK5RAP3-202ENST00000536708 KRTAP19-1Q8IUB9 90 aa5.73□□□□□ -1.49
CDK5RAP3-202ENST00000536708 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
CDK5RAP3-202ENST00000536708 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
CDK5RAP3-202ENST00000536708 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
CDK5RAP3-202ENST00000536708 LUZP6Q538Z0 58 aa5.65□□□□□ -1.51
CDK5RAP3-202ENST00000536708 LCE2BO14633 110 aa5.63□□□□□ -1.51
CDK5RAP3-202ENST00000536708 CAMK2N1Q7Z7J9 78 aa5.62□□□□□ -1.51
CDK5RAP3-202ENST00000536708 USH2AO75445 5202 aa5.6□□□□□ -1.51
CDK5RAP3-202ENST00000536708 PP632Q6XCG6 107 aa5.59□□□□□ -1.51
CDK5RAP3-202ENST00000536708 MT1BP07438 61 aa5.55□□□□□ -1.52
CDK5RAP3-202ENST00000536708 KRTAP19-8Q3LI54 63 aa5.55□□□□□ -1.52
CDK5RAP3-202ENST00000536708 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
CDK5RAP3-202ENST00000536708 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
CDK5RAP3-202ENST00000536708 TNP1P09430 55 aa5.46□□□□□ -1.54
CDK5RAP3-202ENST00000536708 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
CDK5RAP3-202ENST00000536708 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
CDK5RAP3-202ENST00000536708 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
CDK5RAP3-202ENST00000536708 MT1XP80297 61 aa5.34□□□□□ -1.55
CDK5RAP3-202ENST00000536708 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
CDK5RAP3-202ENST00000536708 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
CDK5RAP3-202ENST00000536708 KRTAP19-6Q3LI70 58 aa5.25□□□□□ -1.57
CDK5RAP3-202ENST00000536708 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
CDK5RAP3-202ENST00000536708 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
CDK5RAP3-202ENST00000536708 CRCT1Q9UGL9 99 aa5.16□□□□□ -1.58
CDK5RAP3-202ENST00000536708 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
CDK5RAP3-202ENST00000536708 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
CDK5RAP3-202ENST00000536708 KMT2DO14686 5537 aa5.11□□□□□ -1.59
CDK5RAP3-202ENST00000536708 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
CDK5RAP3-202ENST00000536708 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
CDK5RAP3-202ENST00000536708 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
CDK5RAP3-202ENST00000536708 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
CDK5RAP3-202ENST00000536708 KRTAP4-8Q9BYQ9 185 aa4.99□□□□□ -1.61
CDK5RAP3-202ENST00000536708 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.62
CDK5RAP3-202ENST00000536708 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
CDK5RAP3-202ENST00000536708 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
CDK5RAP3-202ENST00000536708 INE1O15225 51 aa4.82□□□□□ -1.64
CDK5RAP3-202ENST00000536708 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
CDK5RAP3-202ENST00000536708 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
CDK5RAP3-202ENST00000536708 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
CDK5RAP3-202ENST00000536708 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms