RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
LGR5-202ENST00000536515 H1FX-AS1Q4G0G2 97 aa6.87□□□□□ -1.31
LGR5-202ENST00000536515 FAT3Q8TDW7 4589 aa6.87□□□□□ -1.31
LGR5-202ENST00000536515 HERC2O95714 4834 aa6.87□□□□□ -1.31
LGR5-202ENST00000536515 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
LGR5-202ENST00000536515 TNXBP22105 4242 aa6.83□□□□□ -1.32
LGR5-202ENST00000536515 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
LGR5-202ENST00000536515 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
LGR5-202ENST00000536515 KRTAP10-8P60410 259 aa6.8□□□□□ -1.32
LGR5-202ENST00000536515 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
LGR5-202ENST00000536515 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
LGR5-202ENST00000536515 MT1HL1P0DM35 61 aa6.74□□□□□ -1.33
LGR5-202ENST00000536515 XP32Q5T750 250 aa6.73□□□□□ -1.33
LGR5-202ENST00000536515 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
LGR5-202ENST00000536515 ABCA13Q86UQ4 5058 aa6.7□□□□□ -1.34
LGR5-202ENST00000536515 KRTAP10-6P60371 365 aaPredicted RBP6.68□□□□□ -1.34
LGR5-202ENST00000536515 K7ERS5 55 aa6.67□□□□□ -1.34
LGR5-202ENST00000536515 S4R3F8 94 aa6.65□□□□□ -1.34
LGR5-202ENST00000536515 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
LGR5-202ENST00000536515 J3QL48 77 aa6.64□□□□□ -1.35
LGR5-202ENST00000536515 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
LGR5-202ENST00000536515 KRTAP3-2Q9BYR7 98 aa6.63□□□□□ -1.35
LGR5-202ENST00000536515 A0A0D9SG42 100 aa6.61□□□□□ -1.35
LGR5-202ENST00000536515 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
LGR5-202ENST00000536515 PCLOQ9Y6V0 5065 aa6.57□□□□□ -1.36
LGR5-202ENST00000536515 P0C880 135 aa6.57□□□□□ -1.36
LGR5-202ENST00000536515 ROMO1P60602 79 aa6.54□□□□□ -1.36
LGR5-202ENST00000536515 LPAP08519 4548 aa6.53□□□□□ -1.36
LGR5-202ENST00000536515 LRP2P98164 4655 aa6.5□□□□□ -1.37
LGR5-202ENST00000536515 TPRXLQ17RH7 258 aa6.43□□□□□ -1.38
LGR5-202ENST00000536515 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
LGR5-202ENST00000536515 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
LGR5-202ENST00000536515 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
LGR5-202ENST00000536515 C10orf95Q9H7T3 257 aa6.36□□□□□ -1.39
LGR5-202ENST00000536515 HERC1Q15751 4861 aa6.34□□□□□ -1.4
LGR5-202ENST00000536515 M0QZ58 72 aa6.31□□□□□ -1.4
LGR5-202ENST00000536515 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
LGR5-202ENST00000536515 H3BS24 57 aa6.25□□□□□ -1.41
LGR5-202ENST00000536515 SEC61BP60468 96 aaKnown RBP6.19□□□□□ -1.42
LGR5-202ENST00000536515 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
LGR5-202ENST00000536515 R4GN34 69 aa6.19□□□□□ -1.42
LGR5-202ENST00000536515 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
LGR5-202ENST00000536515 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
LGR5-202ENST00000536515 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
LGR5-202ENST00000536515 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
LGR5-202ENST00000536515 UBR4Q5T4S7 5183 aa5.99□□□□□ -1.45
LGR5-202ENST00000536515 MUC2Q02817 5179 aa5.95□□□□□ -1.46
LGR5-202ENST00000536515 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
LGR5-202ENST00000536515 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
LGR5-202ENST00000536515 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
LGR5-202ENST00000536515 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
LGR5-202ENST00000536515 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
LGR5-202ENST00000536515 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
LGR5-202ENST00000536515 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
LGR5-202ENST00000536515 MT1HP80294 61 aa5.69□□□□□ -1.5
LGR5-202ENST00000536515 FAT4Q6V0I7 4981 aa5.68□□□□□ -1.5
LGR5-202ENST00000536515 TNP1P09430 55 aa5.65□□□□□ -1.51
LGR5-202ENST00000536515 LCE2AQ5TA79 106 aaPredicted RBP5.65□□□□□ -1.51
LGR5-202ENST00000536515 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
LGR5-202ENST00000536515 M0R2T5 61 aa5.57□□□□□ -1.52
LGR5-202ENST00000536515 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
LGR5-202ENST00000536515 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
LGR5-202ENST00000536515 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
LGR5-202ENST00000536515 A0A0A0MQY5 61 aa5.53□□□□□ -1.52
LGR5-202ENST00000536515 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
LGR5-202ENST00000536515 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
LGR5-202ENST00000536515 MT1FP04733 61 aa5.44□□□□□ -1.54
LGR5-202ENST00000536515 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
LGR5-202ENST00000536515 MT2AP02795 61 aa5.43□□□□□ -1.54
LGR5-202ENST00000536515 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
LGR5-202ENST00000536515 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
LGR5-202ENST00000536515 KRTAP19-8Q3LI54 63 aa5.3□□□□□ -1.56
LGR5-202ENST00000536515 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
LGR5-202ENST00000536515 MT1BP07438 61 aa5.26□□□□□ -1.57
LGR5-202ENST00000536515 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
LGR5-202ENST00000536515 MT1XP80297 61 aa5.23□□□□□ -1.57
LGR5-202ENST00000536515 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
LGR5-202ENST00000536515 LCE2BO14633 110 aa5.14□□□□□ -1.59
LGR5-202ENST00000536515 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
LGR5-202ENST00000536515 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
LGR5-202ENST00000536515 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
LGR5-202ENST00000536515 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
LGR5-202ENST00000536515 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
LGR5-202ENST00000536515 USH2AO75445 5202 aa4.98□□□□□ -1.61
LGR5-202ENST00000536515 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
LGR5-202ENST00000536515 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.63
LGR5-202ENST00000536515 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
LGR5-202ENST00000536515 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
LGR5-202ENST00000536515 KMT2DO14686 5537 aa4.85□□□□□ -1.63
LGR5-202ENST00000536515 SSPOA2VEC9 5147 aa4.84□□□□□ -1.63
LGR5-202ENST00000536515 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
LGR5-202ENST00000536515 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
LGR5-202ENST00000536515 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
LGR5-202ENST00000536515 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
LGR5-202ENST00000536515 INE1O15225 51 aa4.73□□□□□ -1.65
LGR5-202ENST00000536515 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
LGR5-202ENST00000536515 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
LGR5-202ENST00000536515 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.66
LGR5-202ENST00000536515 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
LGR5-202ENST00000536515 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms