RNA–Protein interactions for RNA: ENST00000536461.5

KDM4B-203, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-203ENST00000536461 AKAP9Q99996 3911 aa7.05□□□□□ -1.28
KDM4B-203ENST00000536461 KRTAP10-12P60413 245 aa7.04□□□□□ -1.28
KDM4B-203ENST00000536461 DNAH11Q96DT5 4516 aa7.04□□□□□ -1.28
KDM4B-203ENST00000536461 ZNF469Q96JG9 3925 aaPredicted RBP7.01□□□□□ -1.29
KDM4B-203ENST00000536461 DNAH1Q9P2D7 4330 aa6.99□□□□□ -1.29
KDM4B-203ENST00000536461 DNAH10Q8IVF4 4471 aa6.92□□□□□ -1.3
KDM4B-203ENST00000536461 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
KDM4B-203ENST00000536461 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
KDM4B-203ENST00000536461 KRTAP12-3P60328 96 aa6.85□□□□□ -1.31
KDM4B-203ENST00000536461 RYR1P21817 5038 aa6.85□□□□□ -1.31
KDM4B-203ENST00000536461 DYNC1H1Q14204 4646 aaKnown RBP6.85□□□□□ -1.31
KDM4B-203ENST00000536461 CSMD3Q7Z407 3707 aa6.84□□□□□ -1.31
KDM4B-203ENST00000536461 MT1HP80294 61 aa6.84□□□□□ -1.32
KDM4B-203ENST00000536461 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
KDM4B-203ENST00000536461 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
KDM4B-203ENST00000536461 VPS13DQ5THJ4 4388 aa6.77□□□□□ -1.33
KDM4B-203ENST00000536461 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
KDM4B-203ENST00000536461 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
KDM4B-203ENST00000536461 FAT1Q14517 4588 aa6.71□□□□□ -1.34
KDM4B-203ENST00000536461 DNAH17Q9UFH2 4485 aa6.71□□□□□ -1.34
KDM4B-203ENST00000536461 DNAH2Q9P225 4427 aa6.69□□□□□ -1.34
KDM4B-203ENST00000536461 MT2AP02795 61 aa6.68□□□□□ -1.34
KDM4B-203ENST00000536461 STARD9Q9P2P6 4700 aa6.64□□□□□ -1.35
KDM4B-203ENST00000536461 PRKDCP78527 4128 aaKnown RBP6.61□□□□□ -1.35
KDM4B-203ENST00000536461 KIAA1109Q2LD37 5005 aa6.6□□□□□ -1.35
KDM4B-203ENST00000536461 SACSQ9NZJ4 4579 aa6.59□□□□□ -1.35
KDM4B-203ENST00000536461 FAT2Q9NYQ8 4349 aa6.59□□□□□ -1.35
KDM4B-203ENST00000536461 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
KDM4B-203ENST00000536461 RYR3Q15413 4870 aa6.53□□□□□ -1.36
KDM4B-203ENST00000536461 MT1FP04733 61 aa6.52□□□□□ -1.37
KDM4B-203ENST00000536461 DYNC2H1Q8NCM8 4307 aaKnown RBP6.51□□□□□ -1.37
KDM4B-203ENST00000536461 ANK2Q01484 3957 aa6.49□□□□□ -1.37
KDM4B-203ENST00000536461 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
KDM4B-203ENST00000536461 DNAH8Q96JB1 4490 aa6.42□□□□□ -1.38
KDM4B-203ENST00000536461 DNAH3Q8TD57 4116 aa6.41□□□□□ -1.38
KDM4B-203ENST00000536461 BIRC6Q9NR09 4857 aa6.37□□□□□ -1.39
KDM4B-203ENST00000536461 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
KDM4B-203ENST00000536461 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.39
KDM4B-203ENST00000536461 RYR2Q92736 4967 aa6.32□□□□□ -1.4
KDM4B-203ENST00000536461 HERC2O95714 4834 aa6.3□□□□□ -1.4
KDM4B-203ENST00000536461 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
KDM4B-203ENST00000536461 KMT2AQ03164 3969 aa6.26□□□□□ -1.41
KDM4B-203ENST00000536461 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
KDM4B-203ENST00000536461 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
KDM4B-203ENST00000536461 LYSTQ99698 3801 aa6.22□□□□□ -1.41
KDM4B-203ENST00000536461 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
KDM4B-203ENST00000536461 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
KDM4B-203ENST00000536461 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
KDM4B-203ENST00000536461 DNAH6Q9C0G6 4158 aa6.15□□□□□ -1.42
KDM4B-203ENST00000536461 KRTAP19-8Q3LI54 63 aa6.12□□□□□ -1.43
KDM4B-203ENST00000536461 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
KDM4B-203ENST00000536461 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
KDM4B-203ENST00000536461 LRP1Q07954 4544 aaKnown RBP6.1□□□□□ -1.43
KDM4B-203ENST00000536461 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.44
KDM4B-203ENST00000536461 LCE3CQ5T5A8 94 aa6.03□□□□□ -1.44
KDM4B-203ENST00000536461 SPRR2EP22531 72 aa6.02□□□□□ -1.45
KDM4B-203ENST00000536461 SPRR2BP35325 72 aa6.02□□□□□ -1.45
KDM4B-203ENST00000536461 SPRR2AP35326 72 aa6.02□□□□□ -1.45
KDM4B-203ENST00000536461 KRTAP9-8Q9BYQ0 159 aa6.02□□□□□ -1.45
KDM4B-203ENST00000536461 HERC1Q15751 4861 aa5.99□□□□□ -1.45
KDM4B-203ENST00000536461 HYDINQ4G0P3 5121 aa5.97□□□□□ -1.45
KDM4B-203ENST00000536461 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
KDM4B-203ENST00000536461 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
KDM4B-203ENST00000536461 DNAH7Q8WXX0 4024 aa5.94□□□□□ -1.46
KDM4B-203ENST00000536461 HSPG2P98160 4391 aa5.92□□□□□ -1.46
KDM4B-203ENST00000536461 CMYA5Q8N3K9 4069 aa5.92□□□□□ -1.46
KDM4B-203ENST00000536461 FRAS1Q86XX4 4008 aa5.92□□□□□ -1.46
KDM4B-203ENST00000536461 MT1BP07438 61 aa5.91□□□□□ -1.46
KDM4B-203ENST00000536461 PKD1P98161 4303 aa5.91□□□□□ -1.46
KDM4B-203ENST00000536461 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.47
KDM4B-203ENST00000536461 MT1XP80297 61 aa5.87□□□□□ -1.47
KDM4B-203ENST00000536461 LRP2P98164 4655 aa5.86□□□□□ -1.47
KDM4B-203ENST00000536461 SPRR2DP22532 72 aa5.84□□□□□ -1.48
KDM4B-203ENST00000536461 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
KDM4B-203ENST00000536461 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
KDM4B-203ENST00000536461 HECTD4Q9Y4D8 3996 aa5.8□□□□□ -1.48
KDM4B-203ENST00000536461 LCE2BO14633 110 aa5.78□□□□□ -1.48
KDM4B-203ENST00000536461 KMT2CQ8NEZ4 4911 aaKnown RBP5.73□□□□□ -1.49
KDM4B-203ENST00000536461 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
KDM4B-203ENST00000536461 PKHD1P08F94 4074 aa5.68□□□□□ -1.5
KDM4B-203ENST00000536461 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
KDM4B-203ENST00000536461 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
KDM4B-203ENST00000536461 KRTAP19-2Q3LHN2 52 aa5.67□□□□□ -1.5
KDM4B-203ENST00000536461 MT1GP13640 62 aa5.66□□□□□ -1.5
KDM4B-203ENST00000536461 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
KDM4B-203ENST00000536461 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
KDM4B-203ENST00000536461 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
KDM4B-203ENST00000536461 LPAP08519 4548 aa5.53□□□□□ -1.52
KDM4B-203ENST00000536461 LCE2DQ5TA82 110 aaPredicted RBP5.5□□□□□ -1.53
KDM4B-203ENST00000536461 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
KDM4B-203ENST00000536461 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
KDM4B-203ENST00000536461 KRTAP9-6A0A140TA67 174 aa5.47□□□□□ -1.53
KDM4B-203ENST00000536461 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
KDM4B-203ENST00000536461 KRTAP19-3Q7Z4W3 81 aa5.46□□□□□ -1.54
KDM4B-203ENST00000536461 MUC17Q685J3 4493 aa5.4□□□□□ -1.54
KDM4B-203ENST00000536461 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
KDM4B-203ENST00000536461 FSIP2Q5CZC0 6907 aa5.37□□□□□ -1.55
KDM4B-203ENST00000536461 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
KDM4B-203ENST00000536461 FLGP20930 4061 aaPredicted RBP5.32□□□□□ -1.56
KDM4B-203ENST00000536461 TNXBP22105 4242 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms