RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 HSPG2P98160 4391 aa9.6□□□□□ -0.87
RAB40C-203ENST00000535977 RYR1P21817 5038 aa9.59□□□□□ -0.87
RAB40C-203ENST00000535977 PKHD1L1Q86WI1 4243 aa9.56□□□□□ -0.88
RAB40C-203ENST00000535977 K7ERS5 55 aa9.55□□□□□ -0.88
RAB40C-203ENST00000535977 SPINT4Q6UDR6 99 aa9.52□□□□□ -0.89
RAB40C-203ENST00000535977 KRTAP17-1Q9BYP8 105 aa9.5□□□□□ -0.89
RAB40C-203ENST00000535977 KRTAP10-8P60410 259 aa9.48□□□□□ -0.89
RAB40C-203ENST00000535977 KRTAP3-1Q9BYR8 98 aa9.46□□□□□ -0.9
RAB40C-203ENST00000535977 COX6B2Q6YFQ2 88 aa9.44□□□□□ -0.9
RAB40C-203ENST00000535977 NDUFAF8A1L188 74 aa9.44□□□□□ -0.9
RAB40C-203ENST00000535977 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
RAB40C-203ENST00000535977 Q5VSD8 79 aa9.4□□□□□ -0.9
RAB40C-203ENST00000535977 HERC2O95714 4834 aa9.39□□□□□ -0.91
RAB40C-203ENST00000535977 KRTAP4-5Q9BYR2 181 aa9.38□□□□□ -0.91
RAB40C-203ENST00000535977 ABCA13Q86UQ4 5058 aa9.36□□□□□ -0.91
RAB40C-203ENST00000535977 KRTAP15-1Q3LI76 137 aa9.36□□□□□ -0.91
RAB40C-203ENST00000535977 MYCBP2O75592 4640 aa9.33□□□□□ -0.92
RAB40C-203ENST00000535977 RPL37P61927 97 aaKnown RBP9.32□□□□□ -0.92
RAB40C-203ENST00000535977 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
RAB40C-203ENST00000535977 PCLOQ9Y6V0 5065 aa9.29□□□□□ -0.92
RAB40C-203ENST00000535977 LRP1Q07954 4544 aaKnown RBP9.27□□□□□ -0.92
RAB40C-203ENST00000535977 XP32Q5T750 250 aa9.24□□□□□ -0.93
RAB40C-203ENST00000535977 A0A0D9SG42 100 aa9.23□□□□□ -0.93
RAB40C-203ENST00000535977 KRTAP13-4Q3LI77 160 aa9.2□□□□□ -0.94
RAB40C-203ENST00000535977 TNXBP22105 4242 aa9.2□□□□□ -0.94
RAB40C-203ENST00000535977 FAT3Q8TDW7 4589 aa9.19□□□□□ -0.94
RAB40C-203ENST00000535977 DMBT1Q9UGM3 2413 aaPredicted RBP9.15□□□□□ -0.94
RAB40C-203ENST00000535977 KRTAP10-6P60371 365 aaPredicted RBP9.15□□□□□ -0.95
RAB40C-203ENST00000535977 A0A0A0MQY5 61 aa9.14□□□□□ -0.95
RAB40C-203ENST00000535977 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
RAB40C-203ENST00000535977 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
RAB40C-203ENST00000535977 S4R3F8 94 aa9.08□□□□□ -0.96
RAB40C-203ENST00000535977 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
RAB40C-203ENST00000535977 HERC1Q15751 4861 aa8.99□□□□□ -0.97
RAB40C-203ENST00000535977 KRTAP12-2P59991 146 aa8.96□□□□□ -0.98
RAB40C-203ENST00000535977 J3QL48 77 aa8.92□□□□□ -0.98
RAB40C-203ENST00000535977 KRTAP12-1P59990 96 aa8.82□□□□□ -1
RAB40C-203ENST00000535977 LUZP6Q538Z0 58 aa8.8□□□□□ -1
RAB40C-203ENST00000535977 SEC61BP60468 96 aaKnown RBP8.71□□□□□ -1.02
RAB40C-203ENST00000535977 M0QZ58 72 aa8.68□□□□□ -1.02
RAB40C-203ENST00000535977 LPAP08519 4548 aa8.65□□□□□ -1.03
RAB40C-203ENST00000535977 HMCN2Q8NDA2 5059 aa8.63□□□□□ -1.03
RAB40C-203ENST00000535977 LRP2P98164 4655 aa8.61□□□□□ -1.03
RAB40C-203ENST00000535977 PLAC4Q8WY50 150 aa8.59□□□□□ -1.03
RAB40C-203ENST00000535977 UBR4Q5T4S7 5183 aa8.51□□□□□ -1.05
RAB40C-203ENST00000535977 R4GN34 69 aa8.41□□□□□ -1.06
RAB40C-203ENST00000535977 RNF213Q63HN8 5207 aa8.4□□□□□ -1.07
RAB40C-203ENST00000535977 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
RAB40C-203ENST00000535977 MUC2Q02817 5179 aa8.37□□□□□ -1.07
RAB40C-203ENST00000535977 MUC17Q685J3 4493 aa8.3□□□□□ -1.08
RAB40C-203ENST00000535977 KRTAP19-2Q3LHN2 52 aa8.29□□□□□ -1.08
RAB40C-203ENST00000535977 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
RAB40C-203ENST00000535977 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
RAB40C-203ENST00000535977 FAT4Q6V0I7 4981 aa8□□□□□ -1.13
RAB40C-203ENST00000535977 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
RAB40C-203ENST00000535977 CAMK2N1Q7Z7J9 78 aa7.97□□□□□ -1.13
RAB40C-203ENST00000535977 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
RAB40C-203ENST00000535977 LCE2CQ5TA81 110 aa7.82□□□□□ -1.16
RAB40C-203ENST00000535977 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
RAB40C-203ENST00000535977 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
RAB40C-203ENST00000535977 TNP1P09430 55 aa7.71□□□□□ -1.18
RAB40C-203ENST00000535977 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.18
RAB40C-203ENST00000535977 M0R2T5 61 aa7.67□□□□□ -1.18
RAB40C-203ENST00000535977 MT1HP80294 61 aa7.63□□□□□ -1.19
RAB40C-203ENST00000535977 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
RAB40C-203ENST00000535977 KRTAP10-10P60014 251 aa7.5□□□□□ -1.21
RAB40C-203ENST00000535977 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
RAB40C-203ENST00000535977 MT2AP02795 61 aa7.49□□□□□ -1.21
RAB40C-203ENST00000535977 MT1FP04733 61 aa7.46□□□□□ -1.22
RAB40C-203ENST00000535977 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
RAB40C-203ENST00000535977 INE1O15225 51 aa7.44□□□□□ -1.22
RAB40C-203ENST00000535977 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.23
RAB40C-203ENST00000535977 FSIP2Q5CZC0 6907 aa7.23□□□□□ -1.25
RAB40C-203ENST00000535977 MT1BP07438 61 aa7.22□□□□□ -1.25
RAB40C-203ENST00000535977 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
RAB40C-203ENST00000535977 KRTAP9-3Q9BYQ3 159 aa7.16□□□□□ -1.26
RAB40C-203ENST00000535977 KRTAP10-5P60370 271 aa7.15□□□□□ -1.26
RAB40C-203ENST00000535977 MT1XP80297 61 aa7.14□□□□□ -1.27
RAB40C-203ENST00000535977 KRTAP8-1Q8IUC2 63 aa7.12□□□□□ -1.27
RAB40C-203ENST00000535977 USH2AO75445 5202 aa7.06□□□□□ -1.28
RAB40C-203ENST00000535977 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
RAB40C-203ENST00000535977 KRTAP9-2Q9BYQ4 174 aa6.99□□□□□ -1.29
RAB40C-203ENST00000535977 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
RAB40C-203ENST00000535977 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
RAB40C-203ENST00000535977 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
RAB40C-203ENST00000535977 LCE2BO14633 110 aa6.87□□□□□ -1.31
RAB40C-203ENST00000535977 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
RAB40C-203ENST00000535977 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
RAB40C-203ENST00000535977 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
RAB40C-203ENST00000535977 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
RAB40C-203ENST00000535977 KRTAP9-6A0A140TA67 174 aa6.57□□□□□ -1.36
RAB40C-203ENST00000535977 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
RAB40C-203ENST00000535977 KMT2DO14686 5537 aa6.51□□□□□ -1.37
RAB40C-203ENST00000535977 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
RAB40C-203ENST00000535977 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
RAB40C-203ENST00000535977 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
RAB40C-203ENST00000535977 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
RAB40C-203ENST00000535977 MACF1Q9UPN3 7388 aaKnown RBP6.38□□□□□ -1.39
RAB40C-203ENST00000535977 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
RAB40C-203ENST00000535977 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms