RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TAX1BP3O14907 124 aa5.56□□□□□ -1.52
TNFRSF1A-207ENST00000535958 SMIM6P0DI80 62 aa5.56□□□□□ -1.52
TNFRSF1A-207ENST00000535958 SPCS1Q9Y6A9 102 aa5.55□□□□□ -1.52
TNFRSF1A-207ENST00000535958 CYP4F30PQ9H0H9 118 aa5.53□□□□□ -1.52
TNFRSF1A-207ENST00000535958 A8MUN3 132 aa5.52□□□□□ -1.53
TNFRSF1A-207ENST00000535958 NDUFC1O43677 76 aa5.52□□□□□ -1.53
TNFRSF1A-207ENST00000535958 A0A087WVE0 104 aa5.5□□□□□ -1.53
TNFRSF1A-207ENST00000535958 LOC101927531A0A1B0GV80 90 aa5.5□□□□□ -1.53
TNFRSF1A-207ENST00000535958 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
TNFRSF1A-207ENST00000535958 TRAV22A0A0B4J277 110 aa5.49□□□□□ -1.53
TNFRSF1A-207ENST00000535958 H0YAA0 97 aa5.49□□□□□ -1.53
TNFRSF1A-207ENST00000535958 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
TNFRSF1A-207ENST00000535958 K7EP34 96 aa5.46□□□□□ -1.54
TNFRSF1A-207ENST00000535958 ADM2Q7Z4H4 148 aa5.46□□□□□ -1.54
TNFRSF1A-207ENST00000535958 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
TNFRSF1A-207ENST00000535958 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
TNFRSF1A-207ENST00000535958 ACYP1P07311 99 aa5.42□□□□□ -1.54
TNFRSF1A-207ENST00000535958 SPRR2DP22532 72 aa5.42□□□□□ -1.54
TNFRSF1A-207ENST00000535958 MT1XP80297 61 aa5.42□□□□□ -1.54
TNFRSF1A-207ENST00000535958 PRO0461Q9UI25 63 aa5.42□□□□□ -1.54
TNFRSF1A-207ENST00000535958 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
TNFRSF1A-207ENST00000535958 R4GN34 69 aa5.39□□□□□ -1.55
TNFRSF1A-207ENST00000535958 ATOX1O00244 68 aa5.38□□□□□ -1.55
TNFRSF1A-207ENST00000535958 H0Y9P7 68 aa5.37□□□□□ -1.55
TNFRSF1A-207ENST00000535958 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
TNFRSF1A-207ENST00000535958 C20orf197Q8N268 126 aa5.36□□□□□ -1.55
TNFRSF1A-207ENST00000535958 UQCRQO14949 82 aa5.34□□□□□ -1.55
TNFRSF1A-207ENST00000535958 COL5A1-AS1Q5SY13 56 aa5.33□□□□□ -1.56
TNFRSF1A-207ENST00000535958 M0QZ58 72 aa5.32□□□□□ -1.56
TNFRSF1A-207ENST00000535958 HIST1H4AP62805 103 aaKnown RBP5.3□□□□□ -1.56
TNFRSF1A-207ENST00000535958 GTF2H5Q6ZYL4 71 aa5.3□□□□□ -1.56
TNFRSF1A-207ENST00000535958 LOC105371267A0A1B0GV96 52 aa5.29□□□□□ -1.56
TNFRSF1A-207ENST00000535958 ETDBQ3ZM63 59 aa5.28□□□□□ -1.56
TNFRSF1A-207ENST00000535958 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
TNFRSF1A-207ENST00000535958 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
TNFRSF1A-207ENST00000535958 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
TNFRSF1A-207ENST00000535958 F8W1H4 67 aa5.27□□□□□ -1.57
TNFRSF1A-207ENST00000535958 ATP5EP2Q5VTU8 51 aa5.27□□□□□ -1.57
TNFRSF1A-207ENST00000535958 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
TNFRSF1A-207ENST00000535958 LINC00208Q96KT6 92 aa5.25□□□□□ -1.57
TNFRSF1A-207ENST00000535958 P0C880 135 aa5.24□□□□□ -1.57
TNFRSF1A-207ENST00000535958 MP68P56378 58 aa5.22□□□□□ -1.57
TNFRSF1A-207ENST00000535958 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
TNFRSF1A-207ENST00000535958 MT-ATP8P03928 68 aa5.15□□□□□ -1.59
TNFRSF1A-207ENST00000535958 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
TNFRSF1A-207ENST00000535958 FAM240AA0A1B0GVK7 77 aa5.14□□□□□ -1.59
TNFRSF1A-207ENST00000535958 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
TNFRSF1A-207ENST00000535958 DMAC1Q96GE9 116 aa5.1□□□□□ -1.59
TNFRSF1A-207ENST00000535958 OCR1Q9BZK8 76 aa5.07□□□□□ -1.6
TNFRSF1A-207ENST00000535958 H3BPC8 53 aa5.06□□□□□ -1.6
TNFRSF1A-207ENST00000535958 LINC00643Q86TS7 51 aa5.06□□□□□ -1.6
TNFRSF1A-207ENST00000535958 PCP4L1A6NKN8 68 aa5.03□□□□□ -1.6
TNFRSF1A-207ENST00000535958 GPR98Q8WXG9 6306 aa5.01□□□□□ -1.61
TNFRSF1A-207ENST00000535958 TRAV7A0A075B6U4 112 aa5.01□□□□□ -1.61
TNFRSF1A-207ENST00000535958 SPTSSBQ8NFR3 76 aa5.01□□□□□ -1.61
TNFRSF1A-207ENST00000535958 SCGB1A1P11684 91 aa4.97□□□□□ -1.61
TNFRSF1A-207ENST00000535958 ACYP2P14621 99 aa4.96□□□□□ -1.62
TNFRSF1A-207ENST00000535958 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
TNFRSF1A-207ENST00000535958 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
TNFRSF1A-207ENST00000535958 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
TNFRSF1A-207ENST00000535958 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
TNFRSF1A-207ENST00000535958 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
TNFRSF1A-207ENST00000535958 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
TNFRSF1A-207ENST00000535958 MT1EP04732 61 aa4.84□□□□□ -1.63
TNFRSF1A-207ENST00000535958 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
TNFRSF1A-207ENST00000535958 CYSTM1Q9H1C7 97 aa4.82□□□□□ -1.64
TNFRSF1A-207ENST00000535958 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
TNFRSF1A-207ENST00000535958 J3QR89 54 aa4.79□□□□□ -1.64
TNFRSF1A-207ENST00000535958 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
TNFRSF1A-207ENST00000535958 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
TNFRSF1A-207ENST00000535958 MT4P47944 62 aa4.75□□□□□ -1.65
TNFRSF1A-207ENST00000535958 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
TNFRSF1A-207ENST00000535958 A0A0D9SG42 100 aa4.73□□□□□ -1.65
TNFRSF1A-207ENST00000535958 A0A1B0GV90 55 aa4.73□□□□□ -1.65
TNFRSF1A-207ENST00000535958 SMIM20Q8N5G0 67 aa4.73□□□□□ -1.65
TNFRSF1A-207ENST00000535958 MT1GP13640 62 aa4.72□□□□□ -1.65
TNFRSF1A-207ENST00000535958 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
TNFRSF1A-207ENST00000535958 PCP4P48539 62 aa4.68□□□□□ -1.66
TNFRSF1A-207ENST00000535958 KRTAP19-5Q3LI72 72 aa4.68□□□□□ -1.66
TNFRSF1A-207ENST00000535958 SEC61GP60059 68 aa4.65□□□□□ -1.67
TNFRSF1A-207ENST00000535958 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.67
TNFRSF1A-207ENST00000535958 SNURFQ9Y675 71 aa4.65□□□□□ -1.67
TNFRSF1A-207ENST00000535958 MT1MQ8N339 61 aa4.63□□□□□ -1.67
TNFRSF1A-207ENST00000535958 SERP1Q9Y6X1 66 aa4.63□□□□□ -1.67
TNFRSF1A-207ENST00000535958 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
TNFRSF1A-207ENST00000535958 SPANXA2-OT1Q8N9U9 137 aa4.62□□□□□ -1.67
TNFRSF1A-207ENST00000535958 MT1LQ93083 61 aa4.58□□□□□ -1.68
TNFRSF1A-207ENST00000535958 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
TNFRSF1A-207ENST00000535958 SPATA8Q6RVD6 105 aa4.57□□□□□ -1.68
TNFRSF1A-207ENST00000535958 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
TNFRSF1A-207ENST00000535958 COA5Q86WW8 74 aa4.53□□□□□ -1.68
TNFRSF1A-207ENST00000535958 A0A1B0GU33 70 aa4.52□□□□□ -1.69
TNFRSF1A-207ENST00000535958 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
TNFRSF1A-207ENST00000535958 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
TNFRSF1A-207ENST00000535958 KRTAP12-1P59990 96 aa4.5□□□□□ -1.69
TNFRSF1A-207ENST00000535958 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
TNFRSF1A-207ENST00000535958 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
TNFRSF1A-207ENST00000535958 SMIM26A0A096LP01 95 aa4.44□□□□□ -1.7
TNFRSF1A-207ENST00000535958 K7ERU9 68 aa4.44□□□□□ -1.7
TNFRSF1A-207ENST00000535958 TNP1P09430 55 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms