RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 APOBP04114 4563 aaKnown RBP-0.23□□□□□ -2.45
VBP1-203ENST00000535916 LAMA1P25391 3075 aa-0.24□□□□□ -2.45
VBP1-203ENST00000535916 DDX60Q8IY21 1712 aaKnown RBP-0.24□□□□□ -2.45
VBP1-203ENST00000535916 USP9YO00507 2555 aaPredicted RBP-0.24□□□□□ -2.45
VBP1-203ENST00000535916 DNAH2Q9P225 4427 aa-0.24□□□□□ -2.45
VBP1-203ENST00000535916 TNP1P09430 55 aa-0.24□□□□□ -2.45
VBP1-203ENST00000535916 WFDC10BQ8IUB3 73 aa-0.24□□□□□ -2.45
VBP1-203ENST00000535916 EP400Q96L91 3159 aa-0.24□□□□□ -2.45
VBP1-203ENST00000535916 UNC80Q8N2C7 3258 aa-0.24□□□□□ -2.45
VBP1-203ENST00000535916 SPG11Q96JI7 2443 aa-0.24□□□□□ -2.45
VBP1-203ENST00000535916 CEP290O15078 2479 aa-0.24□□□□□ -2.45
VBP1-203ENST00000535916 CSMD1Q96PZ7 3565 aa-0.24□□□□□ -2.45
VBP1-203ENST00000535916 TEP1Q99973 2627 aaKnown RBP-0.24□□□□□ -2.45
VBP1-203ENST00000535916 DNAH11Q96DT5 4516 aa-0.25□□□□□ -2.45
VBP1-203ENST00000535916 SNRPGP15A8MWD9 76 aa-0.25□□□□□ -2.45
VBP1-203ENST00000535916 FASNP49327 2511 aaKnown RBP-0.25□□□□□ -2.45
VBP1-203ENST00000535916 TACC2O95359 2948 aa-0.25□□□□□ -2.45
VBP1-203ENST00000535916 DCHS1Q96JQ0 3298 aa-0.25□□□□□ -2.45
VBP1-203ENST00000535916 VPS13BQ7Z7G8 4022 aa-0.25□□□□□ -2.45
VBP1-203ENST00000535916 SACSQ9NZJ4 4579 aa-0.25□□□□□ -2.45
VBP1-203ENST00000535916 AKAP9Q99996 3911 aa-0.26□□□□□ -2.45
VBP1-203ENST00000535916 A0A0C4DFX4 3053 aa-0.26□□□□□ -2.45
VBP1-203ENST00000535916 WDR87Q6ZQQ6 2873 aa-0.26□□□□□ -2.45
VBP1-203ENST00000535916 ITPR3Q14573 2671 aa-0.26□□□□□ -2.45
VBP1-203ENST00000535916 TFF3Q07654 80 aa-0.26□□□□□ -2.45
VBP1-203ENST00000535916 KRTAP19-5Q3LI72 72 aa-0.26□□□□□ -2.45
VBP1-203ENST00000535916 DYNC1H1Q14204 4646 aaKnown RBP-0.26□□□□□ -2.45
VBP1-203ENST00000535916 ANK3Q12955 4377 aaKnown RBP-0.26□□□□□ -2.45
VBP1-203ENST00000535916 MYO18BQ8IUG5 2567 aa-0.26□□□□□ -2.45
VBP1-203ENST00000535916 PKD1L2Q7Z442 2459 aa-0.26□□□□□ -2.45
VBP1-203ENST00000535916 CSMD2Q7Z408 3487 aa-0.26□□□□□ -2.45
VBP1-203ENST00000535916 GCN1Q92616 2671 aaKnown RBP-0.27□□□□□ -2.45
VBP1-203ENST00000535916 ACACAQ13085 2346 aa-0.27□□□□□ -2.45
VBP1-203ENST00000535916 DMXL2Q8TDJ6 3036 aa-0.27□□□□□ -2.45
VBP1-203ENST00000535916 NIPBLQ6KC79 2804 aaeCLIP-0.27□□□□□ -2.45
VBP1-203ENST00000535916 DNAH7Q8WXX0 4024 aa-0.27□□□□□ -2.45
VBP1-203ENST00000535916 DNAH5Q8TE73 4624 aa-0.27□□□□□ -2.45
VBP1-203ENST00000535916 CCDC168Q8NDH2 2452 aa-0.27□□□□□ -2.45
VBP1-203ENST00000535916 DMXL1Q9Y485 3027 aa-0.27□□□□□ -2.45
VBP1-203ENST00000535916 SPENQ96T58 3664 aaKnown RBP-0.28□□□□□ -2.45
VBP1-203ENST00000535916 DNAH8Q96JB1 4490 aa-0.28□□□□□ -2.45
VBP1-203ENST00000535916 PCNTO95613 3336 aa-0.28□□□□□ -2.45
VBP1-203ENST00000535916 A8MTW9 85 aa-0.28□□□□□ -2.45
VBP1-203ENST00000535916 CMYA5Q8N3K9 4069 aa-0.28□□□□□ -2.45
VBP1-203ENST00000535916 MGAM2Q2M2H8 2515 aa-0.28□□□□□ -2.45
VBP1-203ENST00000535916 KALRNO60229 2985 aa-0.29□□□□□ -2.46
VBP1-203ENST00000535916 HTTP42858 3142 aa-0.29□□□□□ -2.46
VBP1-203ENST00000535916 RELNP78509 3460 aa-0.29□□□□□ -2.46
VBP1-203ENST00000535916 M0QZ58 72 aa-0.29□□□□□ -2.46
VBP1-203ENST00000535916 ZZEF1O43149 2961 aa-0.29□□□□□ -2.46
VBP1-203ENST00000535916 MUC3AQ02505 3323 aa-0.29□□□□□ -2.46
VBP1-203ENST00000535916 BOD1L1Q8NFC6 3051 aa-0.29□□□□□ -2.46
VBP1-203ENST00000535916 SPEGQ15772 3267 aa-0.3□□□□□ -2.46
VBP1-203ENST00000535916 WDFY4Q6ZS81 3184 aa-0.3□□□□□ -2.46
VBP1-203ENST00000535916 IQGAP2Q13576 1575 aa-0.3□□□□□ -2.46
VBP1-203ENST00000535916 MT1HP80294 61 aa-0.3□□□□□ -2.46
VBP1-203ENST00000535916 KRTAP8-1Q8IUC2 63 aa-0.3□□□□□ -2.46
VBP1-203ENST00000535916 ANKRD11Q6UB99 2663 aaPredicted RBP-0.3□□□□□ -2.46
VBP1-203ENST00000535916 FAM186AA6NE01 2351 aa-0.3□□□□□ -2.46
VBP1-203ENST00000535916 EYSQ5T1H1 3165 aa-0.3□□□□□ -2.46
VBP1-203ENST00000535916 SMG1Q96Q15 3661 aaKnown RBP-0.3□□□□□ -2.46
VBP1-203ENST00000535916 USP9XQ93008 2570 aaPredicted RBP-0.3□□□□□ -2.46
VBP1-203ENST00000535916 VCANP13611 3396 aa-0.3□□□□□ -2.46
VBP1-203ENST00000535916 NBEAQ8NFP9 2946 aa-0.31□□□□□ -2.46
VBP1-203ENST00000535916 TEX15Q9BXT5 2789 aa-0.31□□□□□ -2.46
VBP1-203ENST00000535916 MTORP42345 2549 aa-0.31□□□□□ -2.46
VBP1-203ENST00000535916 ACACBO00763 2458 aa-0.31□□□□□ -2.46
VBP1-203ENST00000535916 TRPM2O94759 1503 aa-0.31□□□□□ -2.46
VBP1-203ENST00000535916 SMIM2Q9BVW6 85 aa-0.31□□□□□ -2.46
VBP1-203ENST00000535916 TRIOO75962 3097 aa-0.31□□□□□ -2.46
VBP1-203ENST00000535916 LRRK2Q5S007 2527 aa-0.31□□□□□ -2.46
VBP1-203ENST00000535916 CLTCL1P53675 1640 aa-0.31□□□□□ -2.46
VBP1-203ENST00000535916 TRRAPQ9Y4A5 3859 aa-0.32□□□□□ -2.46
VBP1-203ENST00000535916 SZT2Q5T011 3432 aa-0.32□□□□□ -2.46
VBP1-203ENST00000535916 CHD7Q9P2D1 2997 aa-0.32□□□□□ -2.46
VBP1-203ENST00000535916 MT1XP80297 61 aa-0.32□□□□□ -2.46
VBP1-203ENST00000535916 C5orf42Q9H799 3197 aa-0.32□□□□□ -2.46
VBP1-203ENST00000535916 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.32□□□□□ -2.46
VBP1-203ENST00000535916 DNAH17Q9UFH2 4485 aa-0.32□□□□□ -2.46
VBP1-203ENST00000535916 USP34Q70CQ2 3546 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 UTP20O75691 2785 aaKnown RBP-0.33□□□□□ -2.46
VBP1-203ENST00000535916 LOC400499M0QZD8 3231 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 MYO9AB2RTY4 2548 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 WDFY3Q8IZQ1 3526 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 SMR3BP02814 79 aaPredicted RBP-0.33□□□□□ -2.46
VBP1-203ENST00000535916 DEFB131AP59861 70 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 DEFB1P60022 68 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 CEP295Q9C0D2 2601 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 ITPR1Q14643 2758 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 RANBP2P49792 3224 aaKnown RBP-0.33□□□□□ -2.46
VBP1-203ENST00000535916 MGAQ8IWI9 3026 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 SPTBN5Q9NRC6 3674 aaKnown RBP-0.33□□□□□ -2.46
VBP1-203ENST00000535916 DNAH10Q8IVF4 4471 aa-0.33□□□□□ -2.46
VBP1-203ENST00000535916 CFAP54Q96N23 3096 aa-0.34□□□□□ -2.46
VBP1-203ENST00000535916 TLN2Q9Y4G6 2542 aa-0.34□□□□□ -2.46
VBP1-203ENST00000535916 MT1GP13640 62 aa-0.34□□□□□ -2.46
VBP1-203ENST00000535916 CLPSL2Q6UWE3 100 aa-0.34□□□□□ -2.46
VBP1-203ENST00000535916 DNAH14Q0VDD8 3507 aa-0.34□□□□□ -2.46
VBP1-203ENST00000535916 LRBAP50851 2863 aa-0.35□□□□□ -2.46
VBP1-203ENST00000535916 TLN1Q9Y490 2541 aaKnown RBP-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms