RNA–Protein interactions for RNA: ENST00000534317.1

PDE3B-205, Transcript of phosphodiesterase 3B, humanhuman

TSL 1 (best)

Gene PDE3B, Length 5,521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3B-205ENST00000534317 BSNQ9UPA5 3926 aa7.68□□□□□ -1.18
PDE3B-205ENST00000534317 DNAH5Q8TE73 4624 aa7.64□□□□□ -1.19
PDE3B-205ENST00000534317 VPS13CQ709C8 3753 aa7.6□□□□□ -1.19
PDE3B-205ENST00000534317 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
PDE3B-205ENST00000534317 DNAH9Q9NYC9 4486 aa7.58□□□□□ -1.2
PDE3B-205ENST00000534317 KRTAP4-1Q9BYQ7 146 aa7.54□□□□□ -1.2
PDE3B-205ENST00000534317 KRTAP10-5P60370 271 aa7.53□□□□□ -1.2
PDE3B-205ENST00000534317 DNAH10Q8IVF4 4471 aa7.52□□□□□ -1.21
PDE3B-205ENST00000534317 CSMD3Q7Z407 3707 aa7.48□□□□□ -1.21
PDE3B-205ENST00000534317 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.21
PDE3B-205ENST00000534317 DNAH1Q9P2D7 4330 aa7.46□□□□□ -1.22
PDE3B-205ENST00000534317 MT1HP80294 61 aa7.44□□□□□ -1.22
PDE3B-205ENST00000534317 DNAH11Q96DT5 4516 aa7.4□□□□□ -1.22
PDE3B-205ENST00000534317 DNAH2Q9P225 4427 aa7.39□□□□□ -1.23
PDE3B-205ENST00000534317 SPRR2GQ9BYE4 73 aa7.38□□□□□ -1.23
PDE3B-205ENST00000534317 MT2AP02795 61 aa7.37□□□□□ -1.23
PDE3B-205ENST00000534317 DNAH17Q9UFH2 4485 aa7.28□□□□□ -1.24
PDE3B-205ENST00000534317 FAT1Q14517 4588 aa7.27□□□□□ -1.25
PDE3B-205ENST00000534317 VPS13DQ5THJ4 4388 aa7.23□□□□□ -1.25
PDE3B-205ENST00000534317 MT1FP04733 61 aa7.21□□□□□ -1.26
PDE3B-205ENST00000534317 DYNC1H1Q14204 4646 aaKnown RBP7.2□□□□□ -1.26
PDE3B-205ENST00000534317 AKAP9Q99996 3911 aa7.17□□□□□ -1.26
PDE3B-205ENST00000534317 ZNF469Q96JG9 3925 aaPredicted RBP7.14□□□□□ -1.27
PDE3B-205ENST00000534317 KRTAP19-5Q3LI72 72 aa7.14□□□□□ -1.27
PDE3B-205ENST00000534317 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
PDE3B-205ENST00000534317 DNHD1Q96M86 4753 aa7.09□□□□□ -1.27
PDE3B-205ENST00000534317 SACSQ9NZJ4 4579 aa7.08□□□□□ -1.28
PDE3B-205ENST00000534317 LCE3CQ5T5A8 94 aa7.07□□□□□ -1.28
PDE3B-205ENST00000534317 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
PDE3B-205ENST00000534317 RYR1P21817 5038 aa7.03□□□□□ -1.28
PDE3B-205ENST00000534317 SPRR2FQ96RM1 72 aa7.01□□□□□ -1.29
PDE3B-205ENST00000534317 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
PDE3B-205ENST00000534317 FAT2Q9NYQ8 4349 aa7□□□□□ -1.29
PDE3B-205ENST00000534317 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
PDE3B-205ENST00000534317 STARD9Q9P2P6 4700 aa6.96□□□□□ -1.3
PDE3B-205ENST00000534317 DNAH3Q8TD57 4116 aa6.96□□□□□ -1.3
PDE3B-205ENST00000534317 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
PDE3B-205ENST00000534317 APOBP04114 4563 aaKnown RBP6.9□□□□□ -1.3
PDE3B-205ENST00000534317 KRTAP19-8Q3LI54 63 aa6.83□□□□□ -1.32
PDE3B-205ENST00000534317 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
PDE3B-205ENST00000534317 ANK2Q01484 3957 aa6.78□□□□□ -1.32
PDE3B-205ENST00000534317 VPS13BQ7Z7G8 4022 aa6.7□□□□□ -1.34
PDE3B-205ENST00000534317 RYR3Q15413 4870 aa6.69□□□□□ -1.34
PDE3B-205ENST00000534317 MT1XP80297 61 aa6.67□□□□□ -1.34
PDE3B-205ENST00000534317 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
PDE3B-205ENST00000534317 PRKDCP78527 4128 aaKnown RBP6.62□□□□□ -1.35
PDE3B-205ENST00000534317 KMT2AQ03164 3969 aa6.61□□□□□ -1.35
PDE3B-205ENST00000534317 LRP1Q07954 4544 aaKnown RBP6.6□□□□□ -1.35
PDE3B-205ENST00000534317 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
PDE3B-205ENST00000534317 MYCBP2O75592 4640 aa6.59□□□□□ -1.36
PDE3B-205ENST00000534317 MT1BP07438 61 aa6.58□□□□□ -1.36
PDE3B-205ENST00000534317 SPRR2EP22531 72 aa6.53□□□□□ -1.36
PDE3B-205ENST00000534317 SPRR2BP35325 72 aa6.53□□□□□ -1.36
PDE3B-205ENST00000534317 SPRR2AP35326 72 aa6.53□□□□□ -1.36
PDE3B-205ENST00000534317 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
PDE3B-205ENST00000534317 LYSTQ99698 3801 aa6.51□□□□□ -1.37
PDE3B-205ENST00000534317 KRTAP9-8Q9BYQ0 159 aa6.5□□□□□ -1.37
PDE3B-205ENST00000534317 KIAA1109Q2LD37 5005 aa6.5□□□□□ -1.37
PDE3B-205ENST00000534317 MT1GP13640 62 aa6.48□□□□□ -1.37
PDE3B-205ENST00000534317 DNAH7Q8WXX0 4024 aa6.48□□□□□ -1.37
PDE3B-205ENST00000534317 RYR2Q92736 4967 aa6.48□□□□□ -1.37
PDE3B-205ENST00000534317 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.37
PDE3B-205ENST00000534317 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
PDE3B-205ENST00000534317 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
PDE3B-205ENST00000534317 CMYA5Q8N3K9 4069 aa6.41□□□□□ -1.38
PDE3B-205ENST00000534317 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
PDE3B-205ENST00000534317 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
PDE3B-205ENST00000534317 HERC1Q15751 4861 aa6.38□□□□□ -1.39
PDE3B-205ENST00000534317 FRAS1Q86XX4 4008 aa6.37□□□□□ -1.39
PDE3B-205ENST00000534317 KRTAP9-3Q9BYQ3 159 aa6.36□□□□□ -1.39
PDE3B-205ENST00000534317 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
PDE3B-205ENST00000534317 LCE2BO14633 110 aa6.32□□□□□ -1.4
PDE3B-205ENST00000534317 SPRR2DP22532 72 aa6.32□□□□□ -1.4
PDE3B-205ENST00000534317 HSPG2P98160 4391 aa6.28□□□□□ -1.4
PDE3B-205ENST00000534317 HECTD4Q9Y4D8 3996 aa6.24□□□□□ -1.41
PDE3B-205ENST00000534317 PKD1P98161 4303 aa6.23□□□□□ -1.41
PDE3B-205ENST00000534317 LCE3DQ9BYE3 92 aa6.21□□□□□ -1.42
PDE3B-205ENST00000534317 HERC2O95714 4834 aa6.16□□□□□ -1.42
PDE3B-205ENST00000534317 LRP2P98164 4655 aa6.13□□□□□ -1.43
PDE3B-205ENST00000534317 LCE3EQ5T5B0 92 aa6.12□□□□□ -1.43
PDE3B-205ENST00000534317 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
PDE3B-205ENST00000534317 MT1LQ93083 61 aa6.08□□□□□ -1.44
PDE3B-205ENST00000534317 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
PDE3B-205ENST00000534317 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
PDE3B-205ENST00000534317 BIRC6Q9NR09 4857 aa6.03□□□□□ -1.44
PDE3B-205ENST00000534317 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
PDE3B-205ENST00000534317 MT1EP04732 61 aa6.01□□□□□ -1.45
PDE3B-205ENST00000534317 PKHD1L1Q86WI1 4243 aa5.99□□□□□ -1.45
PDE3B-205ENST00000534317 HYDINQ4G0P3 5121 aa5.94□□□□□ -1.46
PDE3B-205ENST00000534317 LPAP08519 4548 aa5.91□□□□□ -1.46
PDE3B-205ENST00000534317 KMT2CQ8NEZ4 4911 aaKnown RBP5.85□□□□□ -1.47
PDE3B-205ENST00000534317 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
PDE3B-205ENST00000534317 MT1MQ8N339 61 aa5.83□□□□□ -1.48
PDE3B-205ENST00000534317 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
PDE3B-205ENST00000534317 PKHD1P08F94 4074 aa5.8□□□□□ -1.48
PDE3B-205ENST00000534317 LCE2DQ5TA82 110 aaPredicted RBP5.79□□□□□ -1.48
PDE3B-205ENST00000534317 EPPK1P58107 5090 aaKnown RBP5.77□□□□□ -1.49
PDE3B-205ENST00000534317 KRTAP9-6A0A140TA67 174 aa5.76□□□□□ -1.49
PDE3B-205ENST00000534317 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
PDE3B-205ENST00000534317 MT3P25713 68 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms