RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 LOC100996750A0A140TA64 210 aa1.69□□□□□ -2.14
SOX6-217ENST00000533870 KRTAP4-6Q9BYQ5 205 aa1.69□□□□□ -2.14
SOX6-217ENST00000533870 LAMA2P24043 3122 aaKnown RBP1.68□□□□□ -2.14
SOX6-217ENST00000533870 HUWE1Q7Z6Z7 4374 aaKnown RBP1.68□□□□□ -2.14
SOX6-217ENST00000533870 VPS13AQ96RL7 3174 aa1.68□□□□□ -2.14
SOX6-217ENST00000533870 FAT3Q8TDW7 4589 aa1.67□□□□□ -2.14
SOX6-217ENST00000533870 UBR4Q5T4S7 5183 aa1.67□□□□□ -2.14
SOX6-217ENST00000533870 FAT1Q14517 4588 aa1.67□□□□□ -2.14
SOX6-217ENST00000533870 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
SOX6-217ENST00000533870 SACSQ9NZJ4 4579 aa1.66□□□□□ -2.14
SOX6-217ENST00000533870 APOBP04114 4563 aaKnown RBP1.66□□□□□ -2.14
SOX6-217ENST00000533870 KRTAP19-8Q3LI54 63 aa1.65□□□□□ -2.15
SOX6-217ENST00000533870 STARD9Q9P2P6 4700 aa1.65□□□□□ -2.15
SOX6-217ENST00000533870 UTRNP46939 3433 aa1.63□□□□□ -2.15
SOX6-217ENST00000533870 RELNP78509 3460 aa1.63□□□□□ -2.15
SOX6-217ENST00000533870 ZFHX3Q15911 3703 aa1.62□□□□□ -2.15
SOX6-217ENST00000533870 LCE3AQ5TA76 89 aa1.62□□□□□ -2.15
SOX6-217ENST00000533870 DNAH17Q9UFH2 4485 aa1.62□□□□□ -2.15
SOX6-217ENST00000533870 CSMD2Q7Z408 3487 aa1.62□□□□□ -2.15
SOX6-217ENST00000533870 CELSR1Q9NYQ6 3014 aa1.62□□□□□ -2.15
SOX6-217ENST00000533870 KRTAP9-3Q9BYQ3 159 aa1.61□□□□□ -2.15
SOX6-217ENST00000533870 HERC2O95714 4834 aa1.6□□□□□ -2.15
SOX6-217ENST00000533870 KRTAP4-8Q9BYQ9 185 aa1.6□□□□□ -2.15
SOX6-217ENST00000533870 LRP1Q07954 4544 aaKnown RBP1.6□□□□□ -2.15
SOX6-217ENST00000533870 VPS13DQ5THJ4 4388 aa1.6□□□□□ -2.15
SOX6-217ENST00000533870 DMXL1Q9Y485 3027 aa1.6□□□□□ -2.15
SOX6-217ENST00000533870 LCE3CQ5T5A8 94 aa1.6□□□□□ -2.15
SOX6-217ENST00000533870 LCE3EQ5T5B0 92 aa1.6□□□□□ -2.15
SOX6-217ENST00000533870 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
SOX6-217ENST00000533870 DNAH1Q9P2D7 4330 aa1.58□□□□□ -2.16
SOX6-217ENST00000533870 KRTAP4-12Q9BQ66 201 aa1.58□□□□□ -2.16
SOX6-217ENST00000533870 UNC80Q8N2C7 3258 aa1.58□□□□□ -2.16
SOX6-217ENST00000533870 MT2AP02795 61 aa1.57□□□□□ -2.16
SOX6-217ENST00000533870 COL6A3P12111 3177 aa1.57□□□□□ -2.16
SOX6-217ENST00000533870 CELSR3Q9NYQ7 3312 aa1.57□□□□□ -2.16
SOX6-217ENST00000533870 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
SOX6-217ENST00000533870 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
SOX6-217ENST00000533870 LCE1FQ5T754 118 aa1.56□□□□□ -2.16
SOX6-217ENST00000533870 SZT2Q5T011 3432 aa1.56□□□□□ -2.16
SOX6-217ENST00000533870 LRP2P98164 4655 aa1.56□□□□□ -2.16
SOX6-217ENST00000533870 HMCN2Q8NDA2 5059 aa1.56□□□□□ -2.16
SOX6-217ENST00000533870 ALMS1Q8TCU4 4167 aa1.54□□□□□ -2.16
SOX6-217ENST00000533870 ANK3Q12955 4377 aaKnown RBP1.54□□□□□ -2.16
SOX6-217ENST00000533870 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
SOX6-217ENST00000533870 MUC17Q685J3 4493 aa1.54□□□□□ -2.16
SOX6-217ENST00000533870 FAT4Q6V0I7 4981 aa1.53□□□□□ -2.16
SOX6-217ENST00000533870 LCE5AQ5TCM9 118 aa1.53□□□□□ -2.16
SOX6-217ENST00000533870 USH2AO75445 5202 aa1.53□□□□□ -2.16
SOX6-217ENST00000533870 SSPOA2VEC9 5147 aa1.52□□□□□ -2.17
SOX6-217ENST00000533870 COL7A1Q02388 2944 aa1.52□□□□□ -2.17
SOX6-217ENST00000533870 DNAH8Q96JB1 4490 aa1.52□□□□□ -2.17
SOX6-217ENST00000533870 KRTAP19-2Q3LHN2 52 aa1.51□□□□□ -2.17
SOX6-217ENST00000533870 MUC12Q9UKN1 5478 aa1.5□□□□□ -2.17
SOX6-217ENST00000533870 BRCA2P51587 3418 aa1.5□□□□□ -2.17
SOX6-217ENST00000533870 MT1FP04733 61 aa1.49□□□□□ -2.17
SOX6-217ENST00000533870 MT1HP80294 61 aa1.49□□□□□ -2.17
SOX6-217ENST00000533870 DNAH14Q0VDD8 3507 aa1.49□□□□□ -2.17
SOX6-217ENST00000533870 KRTAP10-5P60370 271 aa1.48□□□□□ -2.17
SOX6-217ENST00000533870 MT1BP07438 61 aa1.48□□□□□ -2.17
SOX6-217ENST00000533870 CDH23Q9H251 3354 aa1.48□□□□□ -2.17
SOX6-217ENST00000533870 KRTAP5-3Q6L8H2 238 aa1.48□□□□□ -2.17
SOX6-217ENST00000533870 KRTAP9-8Q9BYQ0 159 aa1.48□□□□□ -2.17
SOX6-217ENST00000533870 MT1XP80297 61 aa1.47□□□□□ -2.17
SOX6-217ENST00000533870 KRTAP4-5Q9BYR2 181 aa1.47□□□□□ -2.17
SOX6-217ENST00000533870 DNAH9Q9NYC9 4486 aa1.46□□□□□ -2.18
SOX6-217ENST00000533870 CFAP47Q6ZTR5 3102 aa1.46□□□□□ -2.18
SOX6-217ENST00000533870 KRTAP4-8A0A0G2JLE6 195 aa1.46□□□□□ -2.18
SOX6-217ENST00000533870 XIRP2A4UGR9 3374 aa1.46□□□□□ -2.18
SOX6-217ENST00000533870 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
SOX6-217ENST00000533870 MUC2Q02817 5179 aa1.45□□□□□ -2.18
SOX6-217ENST00000533870 KRTAP4-2Q9BYR5 136 aa1.45□□□□□ -2.18
SOX6-217ENST00000533870 VCANP13611 3396 aa1.45□□□□□ -2.18
SOX6-217ENST00000533870 CUBNO60494 3623 aa1.44□□□□□ -2.18
SOX6-217ENST00000533870 KRTAP19-5Q3LI72 72 aa1.43□□□□□ -2.18
SOX6-217ENST00000533870 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
SOX6-217ENST00000533870 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
SOX6-217ENST00000533870 DCHS1Q96JQ0 3298 aa1.42□□□□□ -2.18
SOX6-217ENST00000533870 MT1GP13640 62 aa1.42□□□□□ -2.18
SOX6-217ENST00000533870 SPEGQ15772 3267 aa1.41□□□□□ -2.18
SOX6-217ENST00000533870 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
SOX6-217ENST00000533870 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
SOX6-217ENST00000533870 KRTAP2-1Q9BYU5 128 aa1.41□□□□□ -2.18
SOX6-217ENST00000533870 MT1LQ93083 61 aa1.41□□□□□ -2.18
SOX6-217ENST00000533870 ASPMQ8IZT6 3477 aa1.41□□□□□ -2.18
SOX6-217ENST00000533870 KRTAP4-7Q9BYR0 210 aa1.4□□□□□ -2.19
SOX6-217ENST00000533870 KMT2DO14686 5537 aa1.4□□□□□ -2.19
SOX6-217ENST00000533870 KRTAP10-7P60409 375 aaPredicted RBP1.4□□□□□ -2.19
SOX6-217ENST00000533870 LCE1DQ5T752 114 aa1.4□□□□□ -2.19
SOX6-217ENST00000533870 MYO15AQ9UKN7 3530 aa1.39□□□□□ -2.19
SOX6-217ENST00000533870 WDFY3Q8IZQ1 3526 aa1.39□□□□□ -2.19
SOX6-217ENST00000533870 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
SOX6-217ENST00000533870 FAT2Q9NYQ8 4349 aa1.38□□□□□ -2.19
SOX6-217ENST00000533870 LOC400499M0QZD8 3231 aa1.37□□□□□ -2.19
SOX6-217ENST00000533870 DYNC2H1Q8NCM8 4307 aaKnown RBP1.37□□□□□ -2.19
SOX6-217ENST00000533870 MT1EP04732 61 aa1.37□□□□□ -2.19
SOX6-217ENST00000533870 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
SOX6-217ENST00000533870 PKD1P98161 4303 aa1.37□□□□□ -2.19
SOX6-217ENST00000533870 KRTAP4-11Q9BYQ6 195 aa1.36□□□□□ -2.19
SOX6-217ENST00000533870 KRTAP12-4P60329 112 aa1.36□□□□□ -2.19
SOX6-217ENST00000533870 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms