RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 A0A1B0GU69 56 aa14.81□□□□□ -0.04
SAMD1-202ENST00000533683 TPRXLQ17RH7 258 aa14.77□□□□□ -0.04
SAMD1-202ENST00000533683 ABCA13Q86UQ4 5058 aa14.75□□□□□ -0.05
SAMD1-202ENST00000533683 LRP2P98164 4655 aa14.64□□□□□ -0.07
SAMD1-202ENST00000533683 LPAP08519 4548 aa14.58□□□□□ -0.07
SAMD1-202ENST00000533683 HERC2O95714 4834 aa14.56□□□□□ -0.08
SAMD1-202ENST00000533683 BIRC6Q9NR09 4857 aa14.52□□□□□ -0.08
SAMD1-202ENST00000533683 J3QL48 77 aa14.51□□□□□ -0.09
SAMD1-202ENST00000533683 UQCR11O14957 56 aa14.46□□□□□ -0.09
SAMD1-202ENST00000533683 SPATA8Q6RVD6 105 aa14.44□□□□□ -0.1
SAMD1-202ENST00000533683 KRTAP3-3Q9BYR6 98 aa14.39□□□□□ -0.11
SAMD1-202ENST00000533683 LINC01554Q52M75 96 aa14.37□□□□□ -0.11
SAMD1-202ENST00000533683 MIR22HGQ0VDD5 57 aa14.37□□□□□ -0.11
SAMD1-202ENST00000533683 H3BS24 57 aa14.36□□□□□ -0.11
SAMD1-202ENST00000533683 S4R3F8 94 aa14.33□□□□□ -0.11
SAMD1-202ENST00000533683 H1FX-AS1Q4G0G2 97 aa14.29□□□□□ -0.12
SAMD1-202ENST00000533683 SEC61BP60468 96 aaKnown RBP14.22□□□□□ -0.13
SAMD1-202ENST00000533683 A0A1B0GU33 70 aa14.2□□□□□ -0.14
SAMD1-202ENST00000533683 PRAC1Q96KF2 57 aa14.17□□□□□ -0.14
SAMD1-202ENST00000533683 H0YAA0 97 aa14.13□□□□□ -0.15
SAMD1-202ENST00000533683 KRTAP10-6P60371 365 aaPredicted RBP14.06□□□□□ -0.16
SAMD1-202ENST00000533683 MUC17Q685J3 4493 aa14.05□□□□□ -0.16
SAMD1-202ENST00000533683 KRTAP4-1Q9BYQ7 146 aa14.03□□□□□ -0.16
SAMD1-202ENST00000533683 KRTAP3-2Q9BYR7 98 aa14.03□□□□□ -0.16
SAMD1-202ENST00000533683 PCLOQ9Y6V0 5065 aa14□□□□□ -0.17
SAMD1-202ENST00000533683 ADM2Q7Z4H4 148 aa14□□□□□ -0.17
SAMD1-202ENST00000533683 CSAG1Q6PB30 78 aa13.92□□□□□ -0.18
SAMD1-202ENST00000533683 P0C880 135 aa13.87□□□□□ -0.19
SAMD1-202ENST00000533683 HERC1Q15751 4861 aa13.86□□□□□ -0.19
SAMD1-202ENST00000533683 KRTAP13-4Q3LI77 160 aa13.8□□□□□ -0.2
SAMD1-202ENST00000533683 KRTAP19-2Q3LHN2 52 aa13.73□□□□□ -0.21
SAMD1-202ENST00000533683 HMCN2Q8NDA2 5059 aa13.73□□□□□ -0.21
SAMD1-202ENST00000533683 MUC2Q02817 5179 aa13.64□□□□□ -0.23
SAMD1-202ENST00000533683 A0A0D9SG42 100 aa13.59□□□□□ -0.23
SAMD1-202ENST00000533683 K7ERS5 55 aa13.53□□□□□ -0.24
SAMD1-202ENST00000533683 M0QZ58 72 aa13.44□□□□□ -0.26
SAMD1-202ENST00000533683 ROMO1P60602 79 aa13.42□□□□□ -0.26
SAMD1-202ENST00000533683 FLGP20930 4061 aaPredicted RBP13.39□□□□□ -0.27
SAMD1-202ENST00000533683 KRTAP25-1Q3LHN0 102 aa13.37□□□□□ -0.27
SAMD1-202ENST00000533683 KRTAP12-2P59991 146 aa13.28□□□□□ -0.28
SAMD1-202ENST00000533683 KRTAP12-1P59990 96 aa13.25□□□□□ -0.29
SAMD1-202ENST00000533683 R4GN34 69 aa13.25□□□□□ -0.29
SAMD1-202ENST00000533683 LORP23490 312 aaPredicted RBP13.25□□□□□ -0.29
SAMD1-202ENST00000533683 SPINT4Q6UDR6 99 aa13.2□□□□□ -0.3
SAMD1-202ENST00000533683 LCE2CQ5TA81 110 aa13.17□□□□□ -0.3
SAMD1-202ENST00000533683 UBR4Q5T4S7 5183 aa13.11□□□□□ -0.31
SAMD1-202ENST00000533683 CRIPTQ9P021 101 aa13.09□□□□□ -0.31
SAMD1-202ENST00000533683 RNF213Q63HN8 5207 aa13.09□□□□□ -0.31
SAMD1-202ENST00000533683 FAT4Q6V0I7 4981 aa13.01□□□□□ -0.33
SAMD1-202ENST00000533683 MT1HP80294 61 aa12.84□□□□□ -0.35
SAMD1-202ENST00000533683 M0R2T5 61 aa12.77□□□□□ -0.37
SAMD1-202ENST00000533683 C10orf95Q9H7T3 257 aa12.67□□□□□ -0.38
SAMD1-202ENST00000533683 CAMK2N1Q7Z7J9 78 aa12.49□□□□□ -0.41
SAMD1-202ENST00000533683 SPRR2GQ9BYE4 73 aa12.49□□□□□ -0.41
SAMD1-202ENST00000533683 MT2AP02795 61 aa12.47□□□□□ -0.41
SAMD1-202ENST00000533683 KRTAP9-8Q9BYQ0 159 aa12.46□□□□□ -0.41
SAMD1-202ENST00000533683 KRTAP19-1Q8IUB9 90 aa12.45□□□□□ -0.42
SAMD1-202ENST00000533683 MT1FP04733 61 aa12.44□□□□□ -0.42
SAMD1-202ENST00000533683 KRTAP15-1Q3LI76 137 aa12.43□□□□□ -0.42
SAMD1-202ENST00000533683 KRTAP10-10P60014 251 aa12.4□□□□□ -0.42
SAMD1-202ENST00000533683 NDUFAF8A1L188 74 aa12.39□□□□□ -0.43
SAMD1-202ENST00000533683 A0A0A0MQY5 61 aa12.34□□□□□ -0.43
SAMD1-202ENST00000533683 PLAC4Q8WY50 150 aa12.18□□□□□ -0.46
SAMD1-202ENST00000533683 KRTAP19-8Q3LI54 63 aa12.04□□□□□ -0.48
SAMD1-202ENST00000533683 KRTAP9-3Q9BYQ3 159 aa11.98□□□□□ -0.49
SAMD1-202ENST00000533683 TNP1P09430 55 aa11.95□□□□□ -0.5
SAMD1-202ENST00000533683 MT1BP07438 61 aa11.9□□□□□ -0.5
SAMD1-202ENST00000533683 LCE2AQ5TA79 106 aaPredicted RBP11.88□□□□□ -0.51
SAMD1-202ENST00000533683 PP632Q6XCG6 107 aa11.88□□□□□ -0.51
SAMD1-202ENST00000533683 LUZP6Q538Z0 58 aa11.82□□□□□ -0.52
SAMD1-202ENST00000533683 KRTAP23-1A1A580 65 aa11.69□□□□□ -0.54
SAMD1-202ENST00000533683 KRTAP10-5P60370 271 aa11.65□□□□□ -0.54
SAMD1-202ENST00000533683 MT1XP80297 61 aa11.65□□□□□ -0.54
SAMD1-202ENST00000533683 LCE2BO14633 110 aa11.58□□□□□ -0.56
SAMD1-202ENST00000533683 LCE3AQ5TA76 89 aa11.41□□□□□ -0.58
SAMD1-202ENST00000533683 PRO2289Q9P1D8 64 aa11.34□□□□□ -0.59
SAMD1-202ENST00000533683 USH2AO75445 5202 aa11.27□□□□□ -0.61
SAMD1-202ENST00000533683 KRTAP10-7P60409 375 aaPredicted RBP11.26□□□□□ -0.61
SAMD1-202ENST00000533683 KRTAP10-12P60413 245 aa11.21□□□□□ -0.62
SAMD1-202ENST00000533683 KRTAP8-1Q8IUC2 63 aa11.16□□□□□ -0.62
SAMD1-202ENST00000533683 KRTAP12-3P60328 96 aa10.91□□□□□ -0.66
SAMD1-202ENST00000533683 LCE2DQ5TA82 110 aaPredicted RBP10.9□□□□□ -0.66
SAMD1-202ENST00000533683 SPRR5A0A1B0GTR4 108 aa10.86□□□□□ -0.67
SAMD1-202ENST00000533683 SSPOA2VEC9 5147 aa10.8□□□□□ -0.68
SAMD1-202ENST00000533683 KMT2DO14686 5537 aa10.74□□□□□ -0.69
SAMD1-202ENST00000533683 KRTAP4-8A0A0G2JLE6 195 aa10.7□□□□□ -0.7
SAMD1-202ENST00000533683 KRTAP4-8Q9BYQ9 185 aa10.7□□□□□ -0.7
SAMD1-202ENST00000533683 KRTAP19-5Q3LI72 72 aa10.67□□□□□ -0.7
SAMD1-202ENST00000533683 KRTAP19-6Q3LI70 58 aa10.64□□□□□ -0.71
SAMD1-202ENST00000533683 FSIP2Q5CZC0 6907 aa10.56□□□□□ -0.72
SAMD1-202ENST00000533683 KRTAP19-7Q3SYF9 63 aa10.39□□□□□ -0.75
SAMD1-202ENST00000533683 INE1O15225 51 aa10.26□□□□□ -0.77
SAMD1-202ENST00000533683 LCE3CQ5T5A8 94 aa10.24□□□□□ -0.77
SAMD1-202ENST00000533683 FCGBPQ9Y6R7 5405 aaPredicted RBP10.19□□□□□ -0.78
SAMD1-202ENST00000533683 MT1EP04732 61 aa10.15□□□□□ -0.79
SAMD1-202ENST00000533683 MT1LQ93083 61 aa10.04□□□□□ -0.8
SAMD1-202ENST00000533683 KRTAP19-4Q3LI73 84 aa9.94□□□□□ -0.82
SAMD1-202ENST00000533683 KRTAP4-7Q9BYR0 210 aa9.93□□□□□ -0.82
SAMD1-202ENST00000533683 KRTAP9-2Q9BYQ4 174 aa9.83□□□□□ -0.84
SAMD1-202ENST00000533683 KRTAP9-6A8MVA2 160 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms