RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
PTPRK-219ENST00000531050 DNAH6Q9C0G6 4158 aa4.01□□□□□ -1.77
PTPRK-219ENST00000531050 KRTAP10-2P60368 255 aa4□□□□□ -1.77
PTPRK-219ENST00000531050 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
PTPRK-219ENST00000531050 DNAH5Q8TE73 4624 aa3.97□□□□□ -1.77
PTPRK-219ENST00000531050 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
PTPRK-219ENST00000531050 KRTAP10-1P60331 282 aa3.95□□□□□ -1.78
PTPRK-219ENST00000531050 PLAC4Q8WY50 150 aa3.95□□□□□ -1.78
PTPRK-219ENST00000531050 KRTAP1-4P0C5Y4 121 aa3.94□□□□□ -1.78
PTPRK-219ENST00000531050 PKD1P98161 4303 aa3.93□□□□□ -1.78
PTPRK-219ENST00000531050 LRP1BQ9NZR2 4599 aa3.91□□□□□ -1.78
PTPRK-219ENST00000531050 FAT2Q9NYQ8 4349 aa3.9□□□□□ -1.78
PTPRK-219ENST00000531050 SACSQ9NZJ4 4579 aa3.9□□□□□ -1.79
PTPRK-219ENST00000531050 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
PTPRK-219ENST00000531050 HYDINQ4G0P3 5121 aa3.88□□□□□ -1.79
PTPRK-219ENST00000531050 KMT2CQ8NEZ4 4911 aaKnown RBP3.88□□□□□ -1.79
PTPRK-219ENST00000531050 MYCBP2O75592 4640 aa3.84□□□□□ -1.8
PTPRK-219ENST00000531050 RYR2Q92736 4967 aa3.83□□□□□ -1.8
PTPRK-219ENST00000531050 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
PTPRK-219ENST00000531050 RYR3Q15413 4870 aa3.82□□□□□ -1.8
PTPRK-219ENST00000531050 RPS29P62273 56 aaKnown RBP3.81□□□□□ -1.8
PTPRK-219ENST00000531050 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
PTPRK-219ENST00000531050 APOBP04114 4563 aaKnown RBP3.77□□□□□ -1.81
PTPRK-219ENST00000531050 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
PTPRK-219ENST00000531050 PKHD1P08F94 4074 aa3.77□□□□□ -1.81
PTPRK-219ENST00000531050 SMR3BP02814 79 aaPredicted RBP3.77□□□□□ -1.81
PTPRK-219ENST00000531050 A0A1B0GVY2 172 aa3.75□□□□□ -1.81
PTPRK-219ENST00000531050 KRTAP10-4P60372 401 aaPredicted RBP3.75□□□□□ -1.81
PTPRK-219ENST00000531050 DYNC1H1Q14204 4646 aaKnown RBP3.75□□□□□ -1.81
PTPRK-219ENST00000531050 M0QZ58 72 aa3.74□□□□□ -1.81
PTPRK-219ENST00000531050 PKHD1L1Q86WI1 4243 aa3.73□□□□□ -1.81
PTPRK-219ENST00000531050 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
PTPRK-219ENST00000531050 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
PTPRK-219ENST00000531050 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
PTPRK-219ENST00000531050 FAT1Q14517 4588 aa3.68□□□□□ -1.82
PTPRK-219ENST00000531050 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
PTPRK-219ENST00000531050 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
PTPRK-219ENST00000531050 HSPG2P98160 4391 aa3.63□□□□□ -1.83
PTPRK-219ENST00000531050 BIRC6Q9NR09 4857 aa3.59□□□□□ -1.83
PTPRK-219ENST00000531050 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
PTPRK-219ENST00000531050 TNXBP22105 4242 aa3.59□□□□□ -1.84
PTPRK-219ENST00000531050 KIAA1109Q2LD37 5005 aa3.58□□□□□ -1.84
PTPRK-219ENST00000531050 Q5VSD8 79 aa3.58□□□□□ -1.84
PTPRK-219ENST00000531050 RYR1P21817 5038 aa3.56□□□□□ -1.84
PTPRK-219ENST00000531050 R4GN34 69 aa3.55□□□□□ -1.84
PTPRK-219ENST00000531050 INE1O15225 51 aa3.54□□□□□ -1.84
PTPRK-219ENST00000531050 KRTAP17-1Q9BYP8 105 aa3.53□□□□□ -1.84
PTPRK-219ENST00000531050 HERC2O95714 4834 aa3.51□□□□□ -1.85
PTPRK-219ENST00000531050 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
PTPRK-219ENST00000531050 KRTAP4-5Q9BYR2 181 aa3.47□□□□□ -1.85
PTPRK-219ENST00000531050 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.86
PTPRK-219ENST00000531050 LPAP08519 4548 aa3.44□□□□□ -1.86
PTPRK-219ENST00000531050 PCLOQ9Y6V0 5065 aa3.42□□□□□ -1.86
PTPRK-219ENST00000531050 KRTAP23-1A1A580 65 aa3.41□□□□□ -1.86
PTPRK-219ENST00000531050 TNP1P09430 55 aa3.35□□□□□ -1.87
PTPRK-219ENST00000531050 LRP2P98164 4655 aa3.33□□□□□ -1.88
PTPRK-219ENST00000531050 HERC1Q15751 4861 aa3.31□□□□□ -1.88
PTPRK-219ENST00000531050 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
PTPRK-219ENST00000531050 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
PTPRK-219ENST00000531050 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
PTPRK-219ENST00000531050 MUC17Q685J3 4493 aa3.24□□□□□ -1.89
PTPRK-219ENST00000531050 HMCN2Q8NDA2 5059 aa3.21□□□□□ -1.9
PTPRK-219ENST00000531050 FLGP20930 4061 aaPredicted RBP3.2□□□□□ -1.9
PTPRK-219ENST00000531050 KRTAP19-2Q3LHN2 52 aa3.2□□□□□ -1.9
PTPRK-219ENST00000531050 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
PTPRK-219ENST00000531050 KRTAP9-8Q9BYQ0 159 aa3.16□□□□□ -1.9
PTPRK-219ENST00000531050 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
PTPRK-219ENST00000531050 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
PTPRK-219ENST00000531050 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
PTPRK-219ENST00000531050 KRTAP9-6A0A140TA67 174 aa3.11□□□□□ -1.91
PTPRK-219ENST00000531050 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
PTPRK-219ENST00000531050 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
PTPRK-219ENST00000531050 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.92
PTPRK-219ENST00000531050 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
PTPRK-219ENST00000531050 KRTAP8-1Q8IUC2 63 aa3.08□□□□□ -1.92
PTPRK-219ENST00000531050 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
PTPRK-219ENST00000531050 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
PTPRK-219ENST00000531050 KRTAP4-8Q9BYQ9 185 aa3.04□□□□□ -1.92
PTPRK-219ENST00000531050 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
PTPRK-219ENST00000531050 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
PTPRK-219ENST00000531050 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
PTPRK-219ENST00000531050 KRTAP9-2Q9BYQ4 174 aa3.03□□□□□ -1.92
PTPRK-219ENST00000531050 MUC2Q02817 5179 aa3.03□□□□□ -1.92
PTPRK-219ENST00000531050 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
PTPRK-219ENST00000531050 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
PTPRK-219ENST00000531050 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
PTPRK-219ENST00000531050 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
PTPRK-219ENST00000531050 MT1HP80294 61 aa2.91□□□□□ -1.94
PTPRK-219ENST00000531050 KRTAP9-3Q9BYQ3 159 aa2.91□□□□□ -1.94
PTPRK-219ENST00000531050 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
PTPRK-219ENST00000531050 LCE3BQ5TA77 95 aa2.9□□□□□ -1.94
PTPRK-219ENST00000531050 M0R2T5 61 aa2.89□□□□□ -1.95
PTPRK-219ENST00000531050 MT2AP02795 61 aa2.87□□□□□ -1.95
PTPRK-219ENST00000531050 MT1FP04733 61 aa2.87□□□□□ -1.95
PTPRK-219ENST00000531050 KRTAP2-3P0C7H8 128 aa2.87□□□□□ -1.95
PTPRK-219ENST00000531050 KRTAP2-4Q9BYR9 128 aa2.87□□□□□ -1.95
PTPRK-219ENST00000531050 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
PTPRK-219ENST00000531050 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
PTPRK-219ENST00000531050 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
PTPRK-219ENST00000531050 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms