RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 MT1HL1P0DM35 61 aa8.91□□□□□ -0.98
BRCA2-204ENST00000530893 DMBT1Q9UGM3 2413 aaPredicted RBP8.91□□□□□ -0.98
BRCA2-204ENST00000530893 H1FX-AS1Q4G0G2 97 aa8.9□□□□□ -0.99
BRCA2-204ENST00000530893 KRTAP17-1Q9BYP8 105 aa8.89□□□□□ -0.99
BRCA2-204ENST00000530893 H0YAA0 97 aa8.88□□□□□ -0.99
BRCA2-204ENST00000530893 RBM12B-AS1Q9P1G2 102 aa8.87□□□□□ -0.99
BRCA2-204ENST00000530893 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
BRCA2-204ENST00000530893 MYCBP2O75592 4640 aa8.79□□□□□ -1
BRCA2-204ENST00000530893 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
BRCA2-204ENST00000530893 TPRXLQ17RH7 258 aa8.77□□□□□ -1.01
BRCA2-204ENST00000530893 S4R3F8 94 aa8.76□□□□□ -1.01
BRCA2-204ENST00000530893 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
BRCA2-204ENST00000530893 PRAC1Q96KF2 57 aa8.72□□□□□ -1.01
BRCA2-204ENST00000530893 HERC2O95714 4834 aa8.69□□□□□ -1.02
BRCA2-204ENST00000530893 KRTAP10-6P60371 365 aaPredicted RBP8.68□□□□□ -1.02
BRCA2-204ENST00000530893 K7ERS5 55 aa8.66□□□□□ -1.02
BRCA2-204ENST00000530893 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
BRCA2-204ENST00000530893 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
BRCA2-204ENST00000530893 LRP2P98164 4655 aa8.56□□□□□ -1.04
BRCA2-204ENST00000530893 CSAG1Q6PB30 78 aa8.55□□□□□ -1.04
BRCA2-204ENST00000530893 ABCA13Q86UQ4 5058 aa8.53□□□□□ -1.04
BRCA2-204ENST00000530893 LPAP08519 4548 aa8.52□□□□□ -1.05
BRCA2-204ENST00000530893 KRTAP13-4Q3LI77 160 aa8.51□□□□□ -1.05
BRCA2-204ENST00000530893 PCLOQ9Y6V0 5065 aa8.51□□□□□ -1.05
BRCA2-204ENST00000530893 LINC01554Q52M75 96 aa8.49□□□□□ -1.05
BRCA2-204ENST00000530893 P0C880 135 aa8.49□□□□□ -1.05
BRCA2-204ENST00000530893 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
BRCA2-204ENST00000530893 A0A0D9SG42 100 aa8.41□□□□□ -1.06
BRCA2-204ENST00000530893 KRTAP25-1Q3LHN0 102 aa8.4□□□□□ -1.06
BRCA2-204ENST00000530893 ROMO1P60602 79 aa8.39□□□□□ -1.07
BRCA2-204ENST00000530893 M0QZ58 72 aa8.36□□□□□ -1.07
BRCA2-204ENST00000530893 J3QL48 77 aa8.34□□□□□ -1.07
BRCA2-204ENST00000530893 MUC17Q685J3 4493 aa8.28□□□□□ -1.08
BRCA2-204ENST00000530893 KRTAP12-2P59991 146 aa8.25□□□□□ -1.09
BRCA2-204ENST00000530893 KRTAP12-1P59990 96 aa8.24□□□□□ -1.09
BRCA2-204ENST00000530893 SPINT4Q6UDR6 99 aa8.18□□□□□ -1.1
BRCA2-204ENST00000530893 KRTAP4-1Q9BYQ7 146 aa8.18□□□□□ -1.1
BRCA2-204ENST00000530893 CRIPTQ9P021 101 aa8.16□□□□□ -1.1
BRCA2-204ENST00000530893 R4GN34 69 aa8.13□□□□□ -1.11
BRCA2-204ENST00000530893 HERC1Q15751 4861 aa8.12□□□□□ -1.11
BRCA2-204ENST00000530893 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
BRCA2-204ENST00000530893 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
BRCA2-204ENST00000530893 C10orf95Q9H7T3 257 aa7.95□□□□□ -1.14
BRCA2-204ENST00000530893 FLGP20930 4061 aaPredicted RBP7.89□□□□□ -1.15
BRCA2-204ENST00000530893 HMCN2Q8NDA2 5059 aa7.88□□□□□ -1.15
BRCA2-204ENST00000530893 MUC2Q02817 5179 aa7.82□□□□□ -1.16
BRCA2-204ENST00000530893 CAMK2N1Q7Z7J9 78 aa7.68□□□□□ -1.18
BRCA2-204ENST00000530893 UBR4Q5T4S7 5183 aa7.65□□□□□ -1.18
BRCA2-204ENST00000530893 LCE2CQ5TA81 110 aa7.65□□□□□ -1.18
BRCA2-204ENST00000530893 KRTAP15-1Q3LI76 137 aa7.61□□□□□ -1.19
BRCA2-204ENST00000530893 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
BRCA2-204ENST00000530893 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
BRCA2-204ENST00000530893 RNF213Q63HN8 5207 aa7.49□□□□□ -1.21
BRCA2-204ENST00000530893 FAT4Q6V0I7 4981 aa7.47□□□□□ -1.21
BRCA2-204ENST00000530893 M0R2T5 61 aa7.46□□□□□ -1.22
BRCA2-204ENST00000530893 MT1HP80294 61 aa7.46□□□□□ -1.22
BRCA2-204ENST00000530893 H3BS24 57 aa7.42□□□□□ -1.22
BRCA2-204ENST00000530893 TNP1P09430 55 aa7.42□□□□□ -1.22
BRCA2-204ENST00000530893 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
BRCA2-204ENST00000530893 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.23
BRCA2-204ENST00000530893 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
BRCA2-204ENST00000530893 MT2AP02795 61 aa7.3□□□□□ -1.24
BRCA2-204ENST00000530893 NDUFAF8A1L188 74 aa7.29□□□□□ -1.24
BRCA2-204ENST00000530893 MT1FP04733 61 aa7.28□□□□□ -1.24
BRCA2-204ENST00000530893 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
BRCA2-204ENST00000530893 KRTAP9-8Q9BYQ0 159 aa7.28□□□□□ -1.24
BRCA2-204ENST00000530893 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
BRCA2-204ENST00000530893 MT1BP07438 61 aa7.03□□□□□ -1.28
BRCA2-204ENST00000530893 LUZP6Q538Z0 58 aa7.03□□□□□ -1.28
BRCA2-204ENST00000530893 LCE2AQ5TA79 106 aaPredicted RBP7□□□□□ -1.29
BRCA2-204ENST00000530893 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
BRCA2-204ENST00000530893 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
BRCA2-204ENST00000530893 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
BRCA2-204ENST00000530893 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
BRCA2-204ENST00000530893 MT1XP80297 61 aa6.95□□□□□ -1.3
BRCA2-204ENST00000530893 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
BRCA2-204ENST00000530893 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
BRCA2-204ENST00000530893 KRTAP10-12P60413 245 aa6.8□□□□□ -1.32
BRCA2-204ENST00000530893 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
BRCA2-204ENST00000530893 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
BRCA2-204ENST00000530893 LCE2BO14633 110 aa6.68□□□□□ -1.34
BRCA2-204ENST00000530893 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
BRCA2-204ENST00000530893 A0A0A0MQY5 61 aa6.57□□□□□ -1.36
BRCA2-204ENST00000530893 LCE2DQ5TA82 110 aaPredicted RBP6.52□□□□□ -1.37
BRCA2-204ENST00000530893 USH2AO75445 5202 aa6.42□□□□□ -1.38
BRCA2-204ENST00000530893 KRTAP19-5Q3LI72 72 aa6.42□□□□□ -1.38
BRCA2-204ENST00000530893 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
BRCA2-204ENST00000530893 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
BRCA2-204ENST00000530893 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
BRCA2-204ENST00000530893 KRTAP9-6A0A140TA67 174 aa6.28□□□□□ -1.4
BRCA2-204ENST00000530893 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
BRCA2-204ENST00000530893 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
BRCA2-204ENST00000530893 KMT2DO14686 5537 aa6.24□□□□□ -1.41
BRCA2-204ENST00000530893 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
BRCA2-204ENST00000530893 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
BRCA2-204ENST00000530893 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
BRCA2-204ENST00000530893 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
BRCA2-204ENST00000530893 MT1EP04732 61 aa6.04□□□□□ -1.44
BRCA2-204ENST00000530893 INE1O15225 51 aa6.03□□□□□ -1.44
BRCA2-204ENST00000530893 MT1LQ93083 61 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms