RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 APOBP04114 4563 aaKnown RBP5.29□□□□□ -1.56
SF3B2-206ENST00000528302 CAMK2N1Q7Z7J9 78 aa5.26□□□□□ -1.57
SF3B2-206ENST00000528302 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
SF3B2-206ENST00000528302 KIAA1109Q2LD37 5005 aa5.24□□□□□ -1.57
SF3B2-206ENST00000528302 RYR2Q92736 4967 aa5.22□□□□□ -1.57
SF3B2-206ENST00000528302 RYR3Q15413 4870 aa5.22□□□□□ -1.57
SF3B2-206ENST00000528302 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
SF3B2-206ENST00000528302 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
SF3B2-206ENST00000528302 FAT3Q8TDW7 4589 aa5.19□□□□□ -1.58
SF3B2-206ENST00000528302 PKHD1L1Q86WI1 4243 aa5.18□□□□□ -1.58
SF3B2-206ENST00000528302 A0A1B0GVY2 172 aa5.17□□□□□ -1.58
SF3B2-206ENST00000528302 HSPG2P98160 4391 aa5.16□□□□□ -1.58
SF3B2-206ENST00000528302 KRTAP3-3Q9BYR6 98 aa5.14□□□□□ -1.59
SF3B2-206ENST00000528302 KRTAP3-2Q9BYR7 98 aa5.14□□□□□ -1.59
SF3B2-206ENST00000528302 C10orf95Q9H7T3 257 aa5.14□□□□□ -1.59
SF3B2-206ENST00000528302 KRTAP21-3Q3LHN1 58 aa5.14□□□□□ -1.59
SF3B2-206ENST00000528302 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
SF3B2-206ENST00000528302 KRTAP10-4P60372 401 aaPredicted RBP5.13□□□□□ -1.59
SF3B2-206ENST00000528302 KRTAP10-8P60410 259 aa5.12□□□□□ -1.59
SF3B2-206ENST00000528302 Q5VSD8 79 aa5.1□□□□□ -1.59
SF3B2-206ENST00000528302 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
SF3B2-206ENST00000528302 RYR1P21817 5038 aa5.09□□□□□ -1.6
SF3B2-206ENST00000528302 SPINT4Q6UDR6 99 aa5.08□□□□□ -1.6
SF3B2-206ENST00000528302 EPPK1P58107 5090 aaKnown RBP5.08□□□□□ -1.6
SF3B2-206ENST00000528302 LPAP08519 4548 aa5.08□□□□□ -1.6
SF3B2-206ENST00000528302 RPS29P62273 56 aaKnown RBP5.08□□□□□ -1.6
SF3B2-206ENST00000528302 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
SF3B2-206ENST00000528302 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
SF3B2-206ENST00000528302 S4R3F8 94 aa5.03□□□□□ -1.6
SF3B2-206ENST00000528302 TNXBP22105 4242 aa5.03□□□□□ -1.6
SF3B2-206ENST00000528302 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
SF3B2-206ENST00000528302 LRP2P98164 4655 aa5□□□□□ -1.61
SF3B2-206ENST00000528302 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
SF3B2-206ENST00000528302 XP32Q5T750 250 aa4.98□□□□□ -1.61
SF3B2-206ENST00000528302 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
SF3B2-206ENST00000528302 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
SF3B2-206ENST00000528302 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
SF3B2-206ENST00000528302 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
SF3B2-206ENST00000528302 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
SF3B2-206ENST00000528302 M0QZ58 72 aa4.82□□□□□ -1.64
SF3B2-206ENST00000528302 HERC2O95714 4834 aa4.81□□□□□ -1.64
SF3B2-206ENST00000528302 LCE2DQ5TA82 110 aaPredicted RBP4.8□□□□□ -1.64
SF3B2-206ENST00000528302 MUC2Q02817 5179 aa4.79□□□□□ -1.64
SF3B2-206ENST00000528302 R4GN34 69 aa4.77□□□□□ -1.65
SF3B2-206ENST00000528302 HERC1Q15751 4861 aa4.74□□□□□ -1.65
SF3B2-206ENST00000528302 LCE2AQ5TA79 106 aaPredicted RBP4.73□□□□□ -1.65
SF3B2-206ENST00000528302 LORP23490 312 aaPredicted RBP4.72□□□□□ -1.65
SF3B2-206ENST00000528302 LCE2CQ5TA81 110 aa4.71□□□□□ -1.65
SF3B2-206ENST00000528302 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
SF3B2-206ENST00000528302 PCLOQ9Y6V0 5065 aa4.64□□□□□ -1.67
SF3B2-206ENST00000528302 KRTAP4-1Q9BYQ7 146 aa4.61□□□□□ -1.67
SF3B2-206ENST00000528302 RNF213Q63HN8 5207 aa4.61□□□□□ -1.67
SF3B2-206ENST00000528302 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.68
SF3B2-206ENST00000528302 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
SF3B2-206ENST00000528302 MUC17Q685J3 4493 aa4.55□□□□□ -1.68
SF3B2-206ENST00000528302 BIRC6Q9NR09 4857 aa4.54□□□□□ -1.68
SF3B2-206ENST00000528302 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
SF3B2-206ENST00000528302 LCE2BO14633 110 aa4.48□□□□□ -1.69
SF3B2-206ENST00000528302 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
SF3B2-206ENST00000528302 KRTAP19-2Q3LHN2 52 aa4.32□□□□□ -1.72
SF3B2-206ENST00000528302 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
SF3B2-206ENST00000528302 M0R2T5 61 aa4.32□□□□□ -1.72
SF3B2-206ENST00000528302 TNP1P09430 55 aa4.31□□□□□ -1.72
SF3B2-206ENST00000528302 INE1O15225 51 aa4.29□□□□□ -1.72
SF3B2-206ENST00000528302 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
SF3B2-206ENST00000528302 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
SF3B2-206ENST00000528302 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
SF3B2-206ENST00000528302 MT1HP80294 61 aa4.09□□□□□ -1.76
SF3B2-206ENST00000528302 USH2AO75445 5202 aa4.09□□□□□ -1.76
SF3B2-206ENST00000528302 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
SF3B2-206ENST00000528302 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
SF3B2-206ENST00000528302 MT1FP04733 61 aa4.04□□□□□ -1.76
SF3B2-206ENST00000528302 MT2AP02795 61 aa4.01□□□□□ -1.77
SF3B2-206ENST00000528302 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
SF3B2-206ENST00000528302 KMT2DO14686 5537 aa3.98□□□□□ -1.77
SF3B2-206ENST00000528302 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
SF3B2-206ENST00000528302 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
SF3B2-206ENST00000528302 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
SF3B2-206ENST00000528302 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
SF3B2-206ENST00000528302 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
SF3B2-206ENST00000528302 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
SF3B2-206ENST00000528302 MT1XP80297 61 aa3.86□□□□□ -1.79
SF3B2-206ENST00000528302 MT1BP07438 61 aa3.84□□□□□ -1.79
SF3B2-206ENST00000528302 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
SF3B2-206ENST00000528302 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
SF3B2-206ENST00000528302 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
SF3B2-206ENST00000528302 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.81
SF3B2-206ENST00000528302 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.82
SF3B2-206ENST00000528302 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.82
SF3B2-206ENST00000528302 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
SF3B2-206ENST00000528302 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
SF3B2-206ENST00000528302 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.82
SF3B2-206ENST00000528302 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
SF3B2-206ENST00000528302 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
SF3B2-206ENST00000528302 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
SF3B2-206ENST00000528302 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
SF3B2-206ENST00000528302 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
SF3B2-206ENST00000528302 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
SF3B2-206ENST00000528302 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
SF3B2-206ENST00000528302 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms