RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 H0YAA0 97 aa3.95□□□□□ -1.78
C11orf54-207ENST00000528288 TNXBP22105 4242 aa3.94□□□□□ -1.78
C11orf54-207ENST00000528288 A0A1B0GU33 70 aa3.91□□□□□ -1.78
C11orf54-207ENST00000528288 CSAG1Q6PB30 78 aa3.91□□□□□ -1.78
C11orf54-207ENST00000528288 KRTAP17-1Q9BYP8 105 aa3.91□□□□□ -1.78
C11orf54-207ENST00000528288 RYR3Q15413 4870 aa3.91□□□□□ -1.78
C11orf54-207ENST00000528288 Q5VSD8 79 aa3.9□□□□□ -1.79
C11orf54-207ENST00000528288 COX6B2Q6YFQ2 88 aa3.89□□□□□ -1.79
C11orf54-207ENST00000528288 CRIPTQ9P021 101 aa3.89□□□□□ -1.79
C11orf54-207ENST00000528288 KIAA1109Q2LD37 5005 aa3.89□□□□□ -1.79
C11orf54-207ENST00000528288 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
C11orf54-207ENST00000528288 LPAP08519 4548 aa3.88□□□□□ -1.79
C11orf54-207ENST00000528288 H1FX-AS1Q4G0G2 97 aa3.88□□□□□ -1.79
C11orf54-207ENST00000528288 A0A0D9SG42 100 aa3.85□□□□□ -1.79
C11orf54-207ENST00000528288 RYR1P21817 5038 aa3.84□□□□□ -1.79
C11orf54-207ENST00000528288 XP32Q5T750 250 aa3.84□□□□□ -1.8
C11orf54-207ENST00000528288 LINC01554Q52M75 96 aa3.83□□□□□ -1.8
C11orf54-207ENST00000528288 LRP2P98164 4655 aa3.82□□□□□ -1.8
C11orf54-207ENST00000528288 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
C11orf54-207ENST00000528288 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
C11orf54-207ENST00000528288 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
C11orf54-207ENST00000528288 EPPK1P58107 5090 aaKnown RBP3.78□□□□□ -1.8
C11orf54-207ENST00000528288 P0C880 135 aa3.78□□□□□ -1.8
C11orf54-207ENST00000528288 S4R3F8 94 aa3.78□□□□□ -1.8
C11orf54-207ENST00000528288 ABCA13Q86UQ4 5058 aa3.76□□□□□ -1.81
C11orf54-207ENST00000528288 MT1HL1P0DM35 61 aa3.76□□□□□ -1.81
C11orf54-207ENST00000528288 K7ERS5 55 aa3.74□□□□□ -1.81
C11orf54-207ENST00000528288 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
C11orf54-207ENST00000528288 KRTAP4-5Q9BYR2 181 aa3.71□□□□□ -1.81
C11orf54-207ENST00000528288 C10orf95Q9H7T3 257 aa3.69□□□□□ -1.82
C11orf54-207ENST00000528288 SPINT4Q6UDR6 99 aa3.69□□□□□ -1.82
C11orf54-207ENST00000528288 H3BS24 57 aa3.69□□□□□ -1.82
C11orf54-207ENST00000528288 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-207ENST00000528288 ROMO1P60602 79 aa3.68□□□□□ -1.82
C11orf54-207ENST00000528288 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
C11orf54-207ENST00000528288 TPRXLQ17RH7 258 aa3.65□□□□□ -1.83
C11orf54-207ENST00000528288 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
C11orf54-207ENST00000528288 MUC2Q02817 5179 aa3.6□□□□□ -1.83
C11orf54-207ENST00000528288 M0QZ58 72 aa3.57□□□□□ -1.84
C11orf54-207ENST00000528288 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
C11orf54-207ENST00000528288 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
C11orf54-207ENST00000528288 HERC2O95714 4834 aa3.56□□□□□ -1.84
C11orf54-207ENST00000528288 R4GN34 69 aa3.53□□□□□ -1.84
C11orf54-207ENST00000528288 SEC61BP60468 96 aaKnown RBP3.5□□□□□ -1.85
C11orf54-207ENST00000528288 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
C11orf54-207ENST00000528288 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
C11orf54-207ENST00000528288 HERC1Q15751 4861 aa3.46□□□□□ -1.86
C11orf54-207ENST00000528288 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
C11orf54-207ENST00000528288 KRTAP19-2Q3LHN2 52 aa3.41□□□□□ -1.86
C11orf54-207ENST00000528288 PCLOQ9Y6V0 5065 aa3.41□□□□□ -1.86
C11orf54-207ENST00000528288 A0A0A0MQY5 61 aa3.4□□□□□ -1.86
C11orf54-207ENST00000528288 NDUFAF8A1L188 74 aa3.4□□□□□ -1.86
C11orf54-207ENST00000528288 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.86
C11orf54-207ENST00000528288 BIRC6Q9NR09 4857 aa3.39□□□□□ -1.87
C11orf54-207ENST00000528288 CAMK2N1Q7Z7J9 78 aa3.38□□□□□ -1.87
C11orf54-207ENST00000528288 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
C11orf54-207ENST00000528288 RNF213Q63HN8 5207 aa3.34□□□□□ -1.87
C11orf54-207ENST00000528288 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
C11orf54-207ENST00000528288 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
C11orf54-207ENST00000528288 UBR4Q5T4S7 5183 aa3.28□□□□□ -1.88
C11orf54-207ENST00000528288 M0R2T5 61 aa3.25□□□□□ -1.89
C11orf54-207ENST00000528288 TNP1P09430 55 aa3.19□□□□□ -1.9
C11orf54-207ENST00000528288 KRTAP19-1Q8IUB9 90 aa3.17□□□□□ -1.9
C11orf54-207ENST00000528288 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
C11orf54-207ENST00000528288 KRTAP10-10P60014 251 aa3.15□□□□□ -1.9
C11orf54-207ENST00000528288 MT1HP80294 61 aa3.15□□□□□ -1.9
C11orf54-207ENST00000528288 MT1FP04733 61 aa3.14□□□□□ -1.91
C11orf54-207ENST00000528288 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
C11orf54-207ENST00000528288 MT2AP02795 61 aa3.11□□□□□ -1.91
C11orf54-207ENST00000528288 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
C11orf54-207ENST00000528288 LCE3AQ5TA76 89 aa3.09□□□□□ -1.92
C11orf54-207ENST00000528288 KRTAP4-8Q9BYQ9 185 aa3.08□□□□□ -1.92
C11orf54-207ENST00000528288 KRTAP9-8Q9BYQ0 159 aa3.07□□□□□ -1.92
C11orf54-207ENST00000528288 KRTAP23-1A1A580 65 aa3.02□□□□□ -1.93
C11orf54-207ENST00000528288 USH2AO75445 5202 aa3.01□□□□□ -1.93
C11orf54-207ENST00000528288 MT1BP07438 61 aa3□□□□□ -1.93
C11orf54-207ENST00000528288 KRTAP10-5P60370 271 aa2.98□□□□□ -1.93
C11orf54-207ENST00000528288 MT1XP80297 61 aa2.98□□□□□ -1.93
C11orf54-207ENST00000528288 KMT2DO14686 5537 aa2.97□□□□□ -1.93
C11orf54-207ENST00000528288 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
C11orf54-207ENST00000528288 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
C11orf54-207ENST00000528288 KRTAP19-8Q3LI54 63 aa2.96□□□□□ -1.94
C11orf54-207ENST00000528288 KRTAP10-7P60409 375 aaPredicted RBP2.96□□□□□ -1.94
C11orf54-207ENST00000528288 KRTAP9-2Q9BYQ4 174 aa2.95□□□□□ -1.94
C11orf54-207ENST00000528288 KRTAP9-3Q9BYQ3 159 aa2.93□□□□□ -1.94
C11orf54-207ENST00000528288 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
C11orf54-207ENST00000528288 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
C11orf54-207ENST00000528288 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
C11orf54-207ENST00000528288 KRTAP8-1Q8IUC2 63 aa2.9□□□□□ -1.95
C11orf54-207ENST00000528288 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
C11orf54-207ENST00000528288 KRTAP4-8A0A0G2JLE6 195 aa2.84□□□□□ -1.95
C11orf54-207ENST00000528288 LCE3BQ5TA77 95 aa2.83□□□□□ -1.96
C11orf54-207ENST00000528288 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
C11orf54-207ENST00000528288 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
C11orf54-207ENST00000528288 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
C11orf54-207ENST00000528288 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
C11orf54-207ENST00000528288 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
C11orf54-207ENST00000528288 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
C11orf54-207ENST00000528288 KRTAP4-7Q9BYR0 210 aa2.79□□□□□ -1.96
C11orf54-207ENST00000528288 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms