RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
CAPN1-205ENST00000526954 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
CAPN1-205ENST00000526954 ACYP2P14621 99 aa7.87□□□□□ -1.15
CAPN1-205ENST00000526954 CYSTM1Q9H1C7 97 aa7.87□□□□□ -1.15
CAPN1-205ENST00000526954 CCDC179H3BU77 68 aa7.86□□□□□ -1.15
CAPN1-205ENST00000526954 H7BZZ5 65 aa7.86□□□□□ -1.15
CAPN1-205ENST00000526954 MT2AP02795 61 aa7.82□□□□□ -1.16
CAPN1-205ENST00000526954 MT1FP04733 61 aa7.76□□□□□ -1.17
CAPN1-205ENST00000526954 KRTAP10-10P60014 251 aa7.73□□□□□ -1.17
CAPN1-205ENST00000526954 LCE2DQ5TA82 110 aaPredicted RBP7.7□□□□□ -1.18
CAPN1-205ENST00000526954 CHKB-CPT1BH3BT56 60 aa7.69□□□□□ -1.18
CAPN1-205ENST00000526954 H0YAA0 97 aa7.68□□□□□ -1.18
CAPN1-205ENST00000526954 SPTSSBQ8NFR3 76 aa7.68□□□□□ -1.18
CAPN1-205ENST00000526954 COA5Q86WW8 74 aa7.65□□□□□ -1.18
CAPN1-205ENST00000526954 ATP5EP56381 51 aaPredicted RBP7.64□□□□□ -1.19
CAPN1-205ENST00000526954 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
CAPN1-205ENST00000526954 TMEM258P61165 79 aa7.61□□□□□ -1.19
CAPN1-205ENST00000526954 KRTAP9-2Q9BYQ4 174 aa7.61□□□□□ -1.19
CAPN1-205ENST00000526954 ADM2Q7Z4H4 148 aa7.57□□□□□ -1.2
CAPN1-205ENST00000526954 PCP4P48539 62 aa7.54□□□□□ -1.2
CAPN1-205ENST00000526954 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
CAPN1-205ENST00000526954 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
CAPN1-205ENST00000526954 LCE2BO14633 110 aa7.48□□□□□ -1.21
CAPN1-205ENST00000526954 P0C880 135 aa7.47□□□□□ -1.21
CAPN1-205ENST00000526954 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
CAPN1-205ENST00000526954 SPRR2GQ9BYE4 73 aa7.46□□□□□ -1.22
CAPN1-205ENST00000526954 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
CAPN1-205ENST00000526954 USH2AO75445 5202 aa7.37□□□□□ -1.23
CAPN1-205ENST00000526954 SEC61GP60059 68 aa7.34□□□□□ -1.23
CAPN1-205ENST00000526954 KRTAP19-8Q3LI54 63 aa7.34□□□□□ -1.23
CAPN1-205ENST00000526954 R4GN34 69 aa7.34□□□□□ -1.23
CAPN1-205ENST00000526954 M0QZ58 72 aa7.3□□□□□ -1.24
CAPN1-205ENST00000526954 CRCT1Q9UGL9 99 aa7.28□□□□□ -1.24
CAPN1-205ENST00000526954 Q5VV11 94 aa7.27□□□□□ -1.25
CAPN1-205ENST00000526954 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
CAPN1-205ENST00000526954 MT1BP07438 61 aa7.26□□□□□ -1.25
CAPN1-205ENST00000526954 A0A1B0GU69 56 aa7.25□□□□□ -1.25
CAPN1-205ENST00000526954 LINC01558Q9Y6Z2 57 aa7.24□□□□□ -1.25
CAPN1-205ENST00000526954 SSPOA2VEC9 5147 aa7.2□□□□□ -1.26
CAPN1-205ENST00000526954 KRTAP9-6A0A140TA67 174 aa7.19□□□□□ -1.26
CAPN1-205ENST00000526954 A0A1B0GU33 70 aa7.18□□□□□ -1.26
CAPN1-205ENST00000526954 RPS28P62857 69 aaKnown RBP7.18□□□□□ -1.26
CAPN1-205ENST00000526954 PRR15LQ9BU68 103 aa7.18□□□□□ -1.26
CAPN1-205ENST00000526954 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
CAPN1-205ENST00000526954 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
CAPN1-205ENST00000526954 LINC01554Q52M75 96 aa7.14□□□□□ -1.27
CAPN1-205ENST00000526954 SMIM26A0A096LP01 95 aa7.11□□□□□ -1.27
CAPN1-205ENST00000526954 V9GYY9 64 aa7.11□□□□□ -1.27
CAPN1-205ENST00000526954 Q1T7F1 81 aa7.1□□□□□ -1.27
CAPN1-205ENST00000526954 PLAC4Q8WY50 150 aa7.09□□□□□ -1.27
CAPN1-205ENST00000526954 A6NN06 94 aa7.08□□□□□ -1.28
CAPN1-205ENST00000526954 SPATA8Q6RVD6 105 aa7.07□□□□□ -1.28
CAPN1-205ENST00000526954 KRTAP10-5P60370 271 aa7□□□□□ -1.29
CAPN1-205ENST00000526954 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
CAPN1-205ENST00000526954 A0A0D9SG42 100 aa6.97□□□□□ -1.29
CAPN1-205ENST00000526954 UQCR11O14957 56 aa6.96□□□□□ -1.3
CAPN1-205ENST00000526954 PSPHP1O15172 72 aa6.95□□□□□ -1.3
CAPN1-205ENST00000526954 MT1XP80297 61 aa6.92□□□□□ -1.3
CAPN1-205ENST00000526954 A8MU10 97 aa6.9□□□□□ -1.3
CAPN1-205ENST00000526954 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.3
CAPN1-205ENST00000526954 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
CAPN1-205ENST00000526954 SPINT4Q6UDR6 99 aa6.85□□□□□ -1.31
CAPN1-205ENST00000526954 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
CAPN1-205ENST00000526954 MIR22HGQ0VDD5 57 aa6.83□□□□□ -1.32
CAPN1-205ENST00000526954 CAMK2N1Q7Z7J9 78 aa6.81□□□□□ -1.32
CAPN1-205ENST00000526954 A6NED7 52 aa6.75□□□□□ -1.33
CAPN1-205ENST00000526954 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
CAPN1-205ENST00000526954 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
CAPN1-205ENST00000526954 K7ERS5 55 aa6.61□□□□□ -1.35
CAPN1-205ENST00000526954 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
CAPN1-205ENST00000526954 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
CAPN1-205ENST00000526954 CDC42SE1Q9NRR8 79 aa6.59□□□□□ -1.35
CAPN1-205ENST00000526954 C10orf95Q9H7T3 257 aa6.54□□□□□ -1.36
CAPN1-205ENST00000526954 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
CAPN1-205ENST00000526954 KRTAP6-3Q3LI67 103 aa6.48□□□□□ -1.37
CAPN1-205ENST00000526954 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.38
CAPN1-205ENST00000526954 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
CAPN1-205ENST00000526954 KMT2DO14686 5537 aa6.46□□□□□ -1.38
CAPN1-205ENST00000526954 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
CAPN1-205ENST00000526954 TNP1P09430 55 aa6.43□□□□□ -1.38
CAPN1-205ENST00000526954 KRTAP8-1Q8IUC2 63 aa6.41□□□□□ -1.38
CAPN1-205ENST00000526954 KRTAP5-9P26371 169 aa6.4□□□□□ -1.38
CAPN1-205ENST00000526954 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
CAPN1-205ENST00000526954 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
CAPN1-205ENST00000526954 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
CAPN1-205ENST00000526954 ROMO1P60602 79 aa6.26□□□□□ -1.41
CAPN1-205ENST00000526954 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
CAPN1-205ENST00000526954 MUC12Q9UKN1 5478 aa6.19□□□□□ -1.42
CAPN1-205ENST00000526954 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
CAPN1-205ENST00000526954 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
CAPN1-205ENST00000526954 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
CAPN1-205ENST00000526954 MT1EP04732 61 aa6.1□□□□□ -1.43
CAPN1-205ENST00000526954 MDN1Q9NU22 5596 aa6.09□□□□□ -1.43
CAPN1-205ENST00000526954 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
CAPN1-205ENST00000526954 SPRR2EP22531 72 aa6.07□□□□□ -1.44
CAPN1-205ENST00000526954 SPRR2BP35325 72 aa6.07□□□□□ -1.44
CAPN1-205ENST00000526954 SPRR2AP35326 72 aa6.07□□□□□ -1.44
CAPN1-205ENST00000526954 NEBP20929 6669 aa6.03□□□□□ -1.44
CAPN1-205ENST00000526954 KRTAP12-3P60328 96 aa6□□□□□ -1.45
CAPN1-205ENST00000526954 PP632Q6XCG6 107 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms