RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 NISCHQ9Y2I1 1504 aa39.28■■■■□ 3.88
CAPN1-205ENST00000526954 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
CAPN1-205ENST00000526954 ABCC9O60706 1549 aa33.39■■■□□ 2.94
CAPN1-205ENST00000526954 ZCCHC6Q5VYS8 1495 aaKnown RBP32.83■■■□□ 2.85
CAPN1-205ENST00000526954 DCAF1Q9Y4B6 1507 aa32.56■■■□□ 2.8
CAPN1-205ENST00000526954 MYO15BQ96JP2 1530 aa32.51■■■□□ 2.8
CAPN1-205ENST00000526954 NACADO15069 1562 aa32.51■■■□□ 2.79
CAPN1-205ENST00000526954 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.79
CAPN1-205ENST00000526954 RB1CC1Q8TDY2 1594 aa32.41■■■□□ 2.78
CAPN1-205ENST00000526954 UNC13AQ9UPW8 1703 aa31.72■■■□□ 2.67
CAPN1-205ENST00000526954 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
CAPN1-205ENST00000526954 BICRAQ9NZM4 1560 aa31.41■■■□□ 2.62
CAPN1-205ENST00000526954 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
CAPN1-205ENST00000526954 SHROOM4Q9ULL8 1493 aa31.25■■■□□ 2.59
CAPN1-205ENST00000526954 EIF4G1Q04637 1599 aaKnown RBP30.52■■■□□ 2.48
CAPN1-205ENST00000526954 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.48
CAPN1-205ENST00000526954 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
CAPN1-205ENST00000526954 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
CAPN1-205ENST00000526954 CC2D2AQ9P2K1 1620 aa30.27■■■□□ 2.44
CAPN1-205ENST00000526954 MROH2BQ7Z745 1585 aa30.26■■■□□ 2.43
CAPN1-205ENST00000526954 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
CAPN1-205ENST00000526954 RSF1Q96T23 1441 aaPredicted RBP30.11■■■□□ 2.41
CAPN1-205ENST00000526954 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
CAPN1-205ENST00000526954 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
CAPN1-205ENST00000526954 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
CAPN1-205ENST00000526954 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
CAPN1-205ENST00000526954 WIZO95785 1651 aa29.97■■■□□ 2.39
CAPN1-205ENST00000526954 HMGXB3Q12766 1538 aa29.89■■■□□ 2.38
CAPN1-205ENST00000526954 BAZ1BQ9UIG0 1483 aaKnown RBP29.82■■■□□ 2.36
CAPN1-205ENST00000526954 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
CAPN1-205ENST00000526954 SUPT5HO00267 1087 aaKnown RBP29.67■■■□□ 2.34
CAPN1-205ENST00000526954 CCDC88BA6NC98 1476 aa29.33■■■□□ 2.29
CAPN1-205ENST00000526954 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
CAPN1-205ENST00000526954 LAMC3Q9Y6N6 1575 aa29.11■■■□□ 2.25
CAPN1-205ENST00000526954 CFTRP13569 1480 aa29.07■■■□□ 2.24
CAPN1-205ENST00000526954 NESP48681 1621 aa29.05■■■□□ 2.24
CAPN1-205ENST00000526954 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
CAPN1-205ENST00000526954 PDS5BQ9NTI5 1447 aa28.87■■■□□ 2.21
CAPN1-205ENST00000526954 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
CAPN1-205ENST00000526954 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
CAPN1-205ENST00000526954 ERCC6Q03468 1493 aa28.73■■■□□ 2.19
CAPN1-205ENST00000526954 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
CAPN1-205ENST00000526954 THOC2Q8NI27 1593 aaKnown RBP28.54■■■□□ 2.16
CAPN1-205ENST00000526954 MRC2Q9UBG0 1479 aa28.54■■■□□ 2.16
CAPN1-205ENST00000526954 URB2Q14146 1524 aaKnown RBP28.46■■■□□ 2.15
CAPN1-205ENST00000526954 WDR62O43379 1518 aa28.45■■■□□ 2.15
CAPN1-205ENST00000526954 ABCC8Q09428 1581 aa28.44■■■□□ 2.14
CAPN1-205ENST00000526954 DNMBPQ6XZF7 1577 aa28.4■■■□□ 2.14
CAPN1-205ENST00000526954 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
CAPN1-205ENST00000526954 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
CAPN1-205ENST00000526954 CUX1P39880 1505 aa28.36■■■□□ 2.13
CAPN1-205ENST00000526954 CUX2O14529 1486 aa28.29■■■□□ 2.12
CAPN1-205ENST00000526954 TOP2BQ02880 1626 aa28.28■■■□□ 2.12
CAPN1-205ENST00000526954 BIVM-ERCC5R4GMW8 1640 aa28.28■■■□□ 2.12
CAPN1-205ENST00000526954 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
CAPN1-205ENST00000526954 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
CAPN1-205ENST00000526954 FGD5Q6ZNL6 1462 aa28.17■■■□□ 2.1
CAPN1-205ENST00000526954 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
CAPN1-205ENST00000526954 SOGA1O94964 1423 aa28.07■■■□□ 2.08
CAPN1-205ENST00000526954 TARBP1Q13395 1621 aaKnown RBP28.06■■■□□ 2.08
CAPN1-205ENST00000526954 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
CAPN1-205ENST00000526954 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
CAPN1-205ENST00000526954 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
CAPN1-205ENST00000526954 ABCA10Q8WWZ4 1543 aa27.96■■■□□ 2.07
CAPN1-205ENST00000526954 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
CAPN1-205ENST00000526954 ZNF608Q9ULD9 1512 aaPredicted RBP27.88■■■□□ 2.05
CAPN1-205ENST00000526954 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
CAPN1-205ENST00000526954 TDRD9Q8NDG6 1382 aaKnown RBP27.81■■■□□ 2.04
CAPN1-205ENST00000526954 AQRO60306 1485 aaKnown RBP eCLIP27.8■■■□□ 2.041e-6■■■□□ 17.1
CAPN1-205ENST00000526954 ABCA5Q8WWZ7 1642 aa27.8■■■□□ 2.04
CAPN1-205ENST00000526954 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
CAPN1-205ENST00000526954 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
CAPN1-205ENST00000526954 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
CAPN1-205ENST00000526954 GRIN2BQ13224 1484 aa27.68■■■□□ 2.02
CAPN1-205ENST00000526954 ERICH3Q5RHP9 1530 aa27.63■■■□□ 2.01
CAPN1-205ENST00000526954 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
CAPN1-205ENST00000526954 EEA1Q15075 1411 aa27.58■■■□□ 2
CAPN1-205ENST00000526954 IGF1RP08069 1367 aa27.57■■■□□ 2
CAPN1-205ENST00000526954 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
CAPN1-205ENST00000526954 SNAPC4Q5SXM2 1469 aa27.55■■■□□ 2
CAPN1-205ENST00000526954 CUL7Q14999 1698 aa27.49■■□□□ 1.99
CAPN1-205ENST00000526954 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
CAPN1-205ENST00000526954 FHAD1B1AJZ9 1412 aa27.45■■□□□ 1.98
CAPN1-205ENST00000526954 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
CAPN1-205ENST00000526954 SYNJ2O15056 1496 aa27.44■■□□□ 1.98
CAPN1-205ENST00000526954 CARMIL1Q5VZK9 1371 aa27.4■■□□□ 1.98
CAPN1-205ENST00000526954 CHD1O14646 1710 aa27.38■■□□□ 1.97
CAPN1-205ENST00000526954 FAM9AQ8IZU1 332 aaPredicted RBP27.38■■□□□ 1.97
CAPN1-205ENST00000526954 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
CAPN1-205ENST00000526954 PRXQ9BXM0 1461 aa27.35■■□□□ 1.97
CAPN1-205ENST00000526954 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
CAPN1-205ENST00000526954 FBLN2P98095 1184 aa27.31■■□□□ 1.96
CAPN1-205ENST00000526954 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
CAPN1-205ENST00000526954 KIF21BO75037 1637 aa27.25■■□□□ 1.95
CAPN1-205ENST00000526954 OSCARQ8IYS5 282 aa27.2■■□□□ 1.94
CAPN1-205ENST00000526954 NUP160Q12769 1436 aa27.19■■□□□ 1.94
CAPN1-205ENST00000526954 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
CAPN1-205ENST00000526954 GOLGA3Q08378 1498 aa27.1■■□□□ 1.93
CAPN1-205ENST00000526954 CLASP1Q7Z460 1538 aa27.1■■□□□ 1.93
CAPN1-205ENST00000526954 KIAA0586Q9BVV6 1533 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms