RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 FLG2Q5D862 2391 aaPredicted RBP2.48□□□□□ -2.01
USP48-211ENST00000526044 A0A087WSZ3 146 aa2.48□□□□□ -2.01
USP48-211ENST00000526044 A8MUU9 505 aa2.48□□□□□ -2.01
USP48-211ENST00000526044 C7orf65Q6ZTY9 151 aa2.48□□□□□ -2.01
USP48-211ENST00000526044 NREPQ16612 68 aa2.47□□□□□ -2.01
USP48-211ENST00000526044 ASB16-AS1Q495Z4 193 aa2.47□□□□□ -2.01
USP48-211ENST00000526044 MYCBP2O75592 4640 aa2.47□□□□□ -2.01
USP48-211ENST00000526044 ACYP1P07311 99 aa2.46□□□□□ -2.02
USP48-211ENST00000526044 HIST1H4AP62805 103 aaKnown RBP2.46□□□□□ -2.02
USP48-211ENST00000526044 C1orf64Q8NEQ6 169 aa2.46□□□□□ -2.02
USP48-211ENST00000526044 RETNLBQ9BQ08 111 aa2.46□□□□□ -2.02
USP48-211ENST00000526044 UQCRQO14949 82 aa2.45□□□□□ -2.02
USP48-211ENST00000526044 DEFB116Q30KQ4 102 aa2.45□□□□□ -2.02
USP48-211ENST00000526044 FP248Q71RG6 208 aaPredicted RBP2.45□□□□□ -2.02
USP48-211ENST00000526044 LINC00472Q9H8W2 130 aa2.45□□□□□ -2.02
USP48-211ENST00000526044 IGKV4-1P06312 121 aa2.44□□□□□ -2.02
USP48-211ENST00000526044 TMEM258P61165 79 aa2.44□□□□□ -2.02
USP48-211ENST00000526044 Q96NJ1 140 aa2.44□□□□□ -2.02
USP48-211ENST00000526044 UBL5Q9BZL1 73 aa2.44□□□□□ -2.02
USP48-211ENST00000526044 LINC00846Q9NV44 126 aa2.44□□□□□ -2.02
USP48-211ENST00000526044 DMBT1Q9UGM3 2413 aaPredicted RBP2.43□□□□□ -2.02
USP48-211ENST00000526044 NDUFB1O75438 58 aa2.43□□□□□ -2.02
USP48-211ENST00000526044 SPANXA2-OT1Q8N9U9 137 aa2.43□□□□□ -2.02
USP48-211ENST00000526044 Q5W150 140 aa2.42□□□□□ -2.02
USP48-211ENST00000526044 MT-ATP8P03928 68 aa2.41□□□□□ -2.02
USP48-211ENST00000526044 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
USP48-211ENST00000526044 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
USP48-211ENST00000526044 LINC00643Q86TS7 51 aa2.4□□□□□ -2.03
USP48-211ENST00000526044 IGKV3D-7A0A0C4DH55 119 aa2.39□□□□□ -2.03
USP48-211ENST00000526044 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
USP48-211ENST00000526044 K7EQZ3 153 aa2.38□□□□□ -2.03
USP48-211ENST00000526044 HERC1Q15751 4861 aa2.37□□□□□ -2.03
USP48-211ENST00000526044 TRAV7A0A075B6U4 112 aa2.37□□□□□ -2.03
USP48-211ENST00000526044 A6NN06 94 aa2.37□□□□□ -2.03
USP48-211ENST00000526044 ATP5EP2Q5VTU8 51 aa2.37□□□□□ -2.03
USP48-211ENST00000526044 SERP1Q9Y6X1 66 aa2.37□□□□□ -2.03
USP48-211ENST00000526044 LPAP08519 4548 aa2.36□□□□□ -2.03
USP48-211ENST00000526044 MMP24-AS1A0A0U1RRL7 71 aa2.35□□□□□ -2.03
USP48-211ENST00000526044 hDV103S1A0JD37 113 aa2.35□□□□□ -2.03
USP48-211ENST00000526044 HCG22E2RYF7 251 aa2.35□□□□□ -2.03
USP48-211ENST00000526044 CASC2Q6XLA1 102 aa2.35□□□□□ -2.03
USP48-211ENST00000526044 ATP11AUNQ6ZP68 121 aa2.35□□□□□ -2.03
USP48-211ENST00000526044 WFDC13Q8IUB5 93 aa2.35□□□□□ -2.03
USP48-211ENST00000526044 C20orf166-AS1Q96NR2 134 aa2.35□□□□□ -2.03
USP48-211ENST00000526044 MRPL34Q9BQ48 92 aaKnown RBP2.35□□□□□ -2.03
USP48-211ENST00000526044 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
USP48-211ENST00000526044 H3BPC8 53 aa2.34□□□□□ -2.03
USP48-211ENST00000526044 RPL37P61927 97 aaKnown RBP2.34□□□□□ -2.03
USP48-211ENST00000526044 PP632Q6XCG6 107 aa2.34□□□□□ -2.03
USP48-211ENST00000526044 TMEM254Q8TBM7 123 aa2.34□□□□□ -2.03
USP48-211ENST00000526044 A0A087WVE0 104 aa2.33□□□□□ -2.04
USP48-211ENST00000526044 ROMO1P60602 79 aa2.33□□□□□ -2.04
USP48-211ENST00000526044 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
USP48-211ENST00000526044 A0A1B0GU33 70 aa2.32□□□□□ -2.04
USP48-211ENST00000526044 COX7CP15954 63 aa2.32□□□□□ -2.04
USP48-211ENST00000526044 PCOTHQ58A44 107 aa2.32□□□□□ -2.04
USP48-211ENST00000526044 TP53AIP1Q9HCN2 124 aa2.32□□□□□ -2.04
USP48-211ENST00000526044 ZCCHC13Q8WW36 166 aaKnown RBP2.31□□□□□ -2.04
USP48-211ENST00000526044 LRP2P98164 4655 aa2.31□□□□□ -2.04
USP48-211ENST00000526044 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
USP48-211ENST00000526044 ATOX1O00244 68 aa2.3□□□□□ -2.04
USP48-211ENST00000526044 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.05
USP48-211ENST00000526044 P0C880 135 aa2.27□□□□□ -2.05
USP48-211ENST00000526044 SPINK7P58062 85 aa2.27□□□□□ -2.05
USP48-211ENST00000526044 TRAV22A0A0B4J277 110 aa2.26□□□□□ -2.05
USP48-211ENST00000526044 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
USP48-211ENST00000526044 SERP2Q8N6R1 65 aa2.26□□□□□ -2.05
USP48-211ENST00000526044 KRTAP4-1Q9BYQ7 146 aa2.26□□□□□ -2.05
USP48-211ENST00000526044 H0Y9P7 68 aa2.25□□□□□ -2.05
USP48-211ENST00000526044 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
USP48-211ENST00000526044 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
USP48-211ENST00000526044 ATP5EP56381 51 aaPredicted RBP2.24□□□□□ -2.05
USP48-211ENST00000526044 LINC00208Q96KT6 92 aa2.24□□□□□ -2.05
USP48-211ENST00000526044 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
USP48-211ENST00000526044 R4GN34 69 aa2.24□□□□□ -2.05
USP48-211ENST00000526044 LOC101927531A0A1B0GV80 90 aa2.23□□□□□ -2.05
USP48-211ENST00000526044 HRES1P13985 223 aa2.22□□□□□ -2.05
USP48-211ENST00000526044 MIR22HGQ0VDD5 57 aa2.21□□□□□ -2.06
USP48-211ENST00000526044 COX6B2Q6YFQ2 88 aa2.21□□□□□ -2.06
USP48-211ENST00000526044 NDUFC1O43677 76 aa2.2□□□□□ -2.06
USP48-211ENST00000526044 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
USP48-211ENST00000526044 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
USP48-211ENST00000526044 MUC2Q02817 5179 aa2.2□□□□□ -2.06
USP48-211ENST00000526044 KLKP1Q107X0 134 aa2.19□□□□□ -2.06
USP48-211ENST00000526044 C20orf197Q8N268 126 aa2.19□□□□□ -2.06
USP48-211ENST00000526044 SPTSSBQ8NFR3 76 aa2.19□□□□□ -2.06
USP48-211ENST00000526044 SNURFQ9Y675 71 aa2.19□□□□□ -2.06
USP48-211ENST00000526044 KRTAP19-2Q3LHN2 52 aa2.18□□□□□ -2.06
USP48-211ENST00000526044 CYSTM1Q9H1C7 97 aa2.18□□□□□ -2.06
USP48-211ENST00000526044 H1FX-AS1Q4G0G2 97 aa2.17□□□□□ -2.06
USP48-211ENST00000526044 H7BZZ5 65 aa2.16□□□□□ -2.06
USP48-211ENST00000526044 Q1T7F1 81 aa2.16□□□□□ -2.06
USP48-211ENST00000526044 PRO2289Q9P1D8 64 aa2.16□□□□□ -2.06
USP48-211ENST00000526044 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.07
USP48-211ENST00000526044 M0R2T5 61 aa2.15□□□□□ -2.07
USP48-211ENST00000526044 ACYP2P14621 99 aa2.14□□□□□ -2.07
USP48-211ENST00000526044 MT1HP80294 61 aa2.14□□□□□ -2.07
USP48-211ENST00000526044 CSAG1Q6PB30 78 aa2.13□□□□□ -2.07
USP48-211ENST00000526044 DMAC1Q96GE9 116 aa2.12□□□□□ -2.07
USP48-211ENST00000526044 S4R3F8 94 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 684.1 ms