RNA–Protein interactions for RNA: ENST00000524415.1

SUB1P1-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 1, humanhuman

BASIC

Gene SUB1P1, Length 382 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P1-201ENST00000524415 CSMD3Q7Z407 3707 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 FREM2Q5SZK8 3169 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 EP400Q96L91 3159 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 TNXBP22105 4242 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 SACSQ9NZJ4 4579 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 DOPEY1Q5JWR5 2465 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 FBN2P35556 2912 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 DMXL2Q8TDJ6 3036 aa0.59□□□□□ -2.31
SUB1P1-201ENST00000524415 ATRQ13535 2644 aa0.58□□□□□ -2.32
SUB1P1-201ENST00000524415 CENPFP49454 3210 aa0.58□□□□□ -2.32
SUB1P1-201ENST00000524415 MTORP42345 2549 aa0.58□□□□□ -2.32
SUB1P1-201ENST00000524415 LAMA1P25391 3075 aa0.58□□□□□ -2.32
SUB1P1-201ENST00000524415 CENPEQ02224 2701 aa0.58□□□□□ -2.32
SUB1P1-201ENST00000524415 FLNCQ14315 2725 aa0.58□□□□□ -2.32
SUB1P1-201ENST00000524415 SPRR2GQ9BYE4 73 aa0.58□□□□□ -2.32
SUB1P1-201ENST00000524415 SPENQ96T58 3664 aaKnown RBP0.58□□□□□ -2.32
SUB1P1-201ENST00000524415 AHNAK2Q8IVF2 5795 aa0.58□□□□□ -2.32
SUB1P1-201ENST00000524415 DYNC2H1Q8NCM8 4307 aaKnown RBP0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 STAB2Q8WWQ8 2551 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 CHD8Q9HCK8 2581 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 FRAS1Q86XX4 4008 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 ZANQ9Y493 2812 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 CSMD1Q96PZ7 3565 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 SPRR2DP22532 72 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 SPRR2BP35325 72 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 LYSTQ99698 3801 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 DMDP11532 3685 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 APCP25054 2843 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 LAMA2P24043 3122 aaKnown RBP0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 TACC2O95359 2948 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 CFAP46Q8IYW2 2715 aa0.57□□□□□ -2.32
SUB1P1-201ENST00000524415 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 NSD1Q96L73 2696 aaPredicted RBP0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 ACACBO00763 2458 aa0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 LOC400499M0QZD8 3231 aa0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 MT1EP04732 61 aa0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 SPRR2AP35326 72 aa0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 LAMA3Q16787 3333 aa0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 UNC79Q9P2D8 2635 aa0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 SPTBN5Q9NRC6 3674 aaKnown RBP0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 GCN1Q92616 2671 aaKnown RBP0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 MYO9AB2RTY4 2548 aa0.56□□□□□ -2.32
SUB1P1-201ENST00000524415 BDP1A6H8Y1 2624 aa0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 DNAH10Q8IVF4 4471 aa0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 PCNTO95613 3336 aa0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 SPRR2FQ96RM1 72 aa0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 ZNF469Q96JG9 3925 aaPredicted RBP0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 BSNQ9UPA5 3926 aa0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 UNC80Q8N2C7 3258 aa0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 VPS13BQ7Z7G8 4022 aa0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 ANK3Q12955 4377 aaKnown RBP0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 XIRP2A4UGR9 3374 aa0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 VCANP13611 3396 aa0.55□□□□□ -2.32
SUB1P1-201ENST00000524415 HUWE1Q7Z6Z7 4374 aaKnown RBP0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 LAMA5O15230 3695 aa0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 TEP1Q99973 2627 aaKnown RBP0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 CSMD2Q7Z408 3487 aa0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 CMYA5Q8N3K9 4069 aa0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 DNAH3Q8TD57 4116 aa0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 CUBNO60494 3623 aa0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 DNAH2Q9P225 4427 aa0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 SPTAN1Q13813 2472 aaKnown RBP0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 USP34Q70CQ2 3546 aa0.54□□□□□ -2.32
SUB1P1-201ENST00000524415 FLNAP21333 2647 aaKnown RBP0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 HSPG2P98160 4391 aa0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 UTP20O75691 2785 aaKnown RBP0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 TEX15Q9BXT5 2789 aa0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 PKD1L1Q8TDX9 2849 aa0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 TLN1Q9Y490 2541 aaKnown RBP0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 MT1LQ93083 61 aa0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 USP9XQ93008 2570 aaPredicted RBP0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 HIVEP1P15822 2718 aa0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 PRKDCP78527 4128 aaKnown RBP0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 PKHD1L1Q86WI1 4243 aa0.53□□□□□ -2.32
SUB1P1-201ENST00000524415 DNAH1Q9P2D7 4330 aa0.52□□□□□ -2.33
SUB1P1-201ENST00000524415 ITPR2Q14571 2701 aa0.52□□□□□ -2.33
SUB1P1-201ENST00000524415 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
SUB1P1-201ENST00000524415 MXRA5Q9NR99 2828 aa0.52□□□□□ -2.33
SUB1P1-201ENST00000524415 PKD1P98161 4303 aa0.52□□□□□ -2.33
SUB1P1-201ENST00000524415 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
SUB1P1-201ENST00000524415 SMG1Q96Q15 3661 aaKnown RBP0.51□□□□□ -2.33
SUB1P1-201ENST00000524415 SPRR2EP22531 72 aa0.51□□□□□ -2.33
SUB1P1-201ENST00000524415 MT1XP80297 61 aa0.51□□□□□ -2.33
SUB1P1-201ENST00000524415 MUC3AQ02505 3323 aa0.51□□□□□ -2.33
SUB1P1-201ENST00000524415 KRTAP19-8Q3LI54 63 aa0.51□□□□□ -2.33
SUB1P1-201ENST00000524415 NBEAL2Q6ZNJ1 2754 aa0.51□□□□□ -2.33
SUB1P1-201ENST00000524415 DNAH7Q8WXX0 4024 aa0.51□□□□□ -2.33
SUB1P1-201ENST00000524415 LRP1Q07954 4544 aaKnown RBP0.51□□□□□ -2.33
SUB1P1-201ENST00000524415 FLGP20930 4061 aaPredicted RBP0.5□□□□□ -2.33
SUB1P1-201ENST00000524415 ASPMQ8IZT6 3477 aa0.5□□□□□ -2.33
SUB1P1-201ENST00000524415 MT1HP80294 61 aa0.5□□□□□ -2.33
SUB1P1-201ENST00000524415 TLN2Q9Y4G6 2542 aa0.5□□□□□ -2.33
SUB1P1-201ENST00000524415 FAT3Q8TDW7 4589 aa0.5□□□□□ -2.33
SUB1P1-201ENST00000524415 DNAH17Q9UFH2 4485 aa0.5□□□□□ -2.33
SUB1P1-201ENST00000524415 ANKRD11Q6UB99 2663 aaPredicted RBP0.5□□□□□ -2.33
SUB1P1-201ENST00000524415 ADGRG4Q8IZF6 3080 aa0.49□□□□□ -2.33
SUB1P1-201ENST00000524415 DNAH9Q9NYC9 4486 aa0.49□□□□□ -2.33
SUB1P1-201ENST00000524415 KRTAP19-2Q3LHN2 52 aa0.49□□□□□ -2.33
SUB1P1-201ENST00000524415 ZFYVE26Q68DK2 2539 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms