RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PRR15Q8IV56 129 aa1.32□□□□□ -2.2
SKP1-212ENST00000523966 VPS13DQ5THJ4 4388 aa1.32□□□□□ -2.2
SKP1-212ENST00000523966 DNAH6Q9C0G6 4158 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 FAM236AA0A1B0GUQ0 79 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 FAM236BA0A1B0GV22 79 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 SPINK1P00995 79 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 RPS29P62273 56 aaKnown RBP1.31□□□□□ -2.2
SKP1-212ENST00000523966 ASB16-AS1Q495Z4 193 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 LINC01554Q52M75 96 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 SERP2Q8N6R1 65 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 LIMD2Q9BT23 127 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 LINC00472Q9H8W2 130 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 PLECQ15149 4684 aaKnown RBP1.31□□□□□ -2.2
SKP1-212ENST00000523966 DNAH1Q9P2D7 4330 aa1.31□□□□□ -2.2
SKP1-212ENST00000523966 FLG2Q5D862 2391 aaPredicted RBP1.3□□□□□ -2.2
SKP1-212ENST00000523966 HECTD4Q9Y4D8 3996 aa1.3□□□□□ -2.2
SKP1-212ENST00000523966 HCG22E2RYF7 251 aa1.3□□□□□ -2.2
SKP1-212ENST00000523966 UQCRQO14949 82 aa1.3□□□□□ -2.2
SKP1-212ENST00000523966 ALMS1Q8TCU4 4167 aa1.3□□□□□ -2.2
SKP1-212ENST00000523966 A0A087WVE0 104 aa1.29□□□□□ -2.2
SKP1-212ENST00000523966 SMR3BP02814 79 aaPredicted RBP1.29□□□□□ -2.2
SKP1-212ENST00000523966 COX7CP15954 63 aa1.29□□□□□ -2.2
SKP1-212ENST00000523966 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
SKP1-212ENST00000523966 TP53AIP1Q9HCN2 124 aa1.29□□□□□ -2.2
SKP1-212ENST00000523966 hDV103S1A0JD37 113 aa1.28□□□□□ -2.2
SKP1-212ENST00000523966 K7EQZ3 153 aa1.28□□□□□ -2.2
SKP1-212ENST00000523966 NDUFC1O43677 76 aa1.28□□□□□ -2.2
SKP1-212ENST00000523966 CASC2Q6XLA1 102 aa1.28□□□□□ -2.2
SKP1-212ENST00000523966 SNURFQ9Y675 71 aa1.28□□□□□ -2.2
SKP1-212ENST00000523966 DNAH10Q8IVF4 4471 aa1.28□□□□□ -2.2
SKP1-212ENST00000523966 KRTAP10-4P60372 401 aaPredicted RBP1.27□□□□□ -2.21
SKP1-212ENST00000523966 KLKP1Q107X0 134 aa1.27□□□□□ -2.21
SKP1-212ENST00000523966 Q5VSD8 79 aa1.27□□□□□ -2.21
SKP1-212ENST00000523966 WFDC13Q8IUB5 93 aa1.27□□□□□ -2.21
SKP1-212ENST00000523966 TMEM254Q8TBM7 123 aa1.27□□□□□ -2.21
SKP1-212ENST00000523966 Q96NJ1 140 aa1.27□□□□□ -2.21
SKP1-212ENST00000523966 VPS13BQ7Z7G8 4022 aa1.27□□□□□ -2.21
SKP1-212ENST00000523966 FRAS1Q86XX4 4008 aa1.27□□□□□ -2.21
SKP1-212ENST00000523966 PKHD1P08F94 4074 aa1.26□□□□□ -2.21
SKP1-212ENST00000523966 TRAV22A0A0B4J277 110 aa1.26□□□□□ -2.21
SKP1-212ENST00000523966 MMP24-AS1A0A0U1RRL7 71 aa1.26□□□□□ -2.21
SKP1-212ENST00000523966 ATP5EP56381 51 aaPredicted RBP1.26□□□□□ -2.21
SKP1-212ENST00000523966 C20orf197Q8N268 126 aa1.26□□□□□ -2.21
SKP1-212ENST00000523966 MRPL34Q9BQ48 92 aaKnown RBP1.26□□□□□ -2.21
SKP1-212ENST00000523966 DNAH2Q9P225 4427 aa1.26□□□□□ -2.21
SKP1-212ENST00000523966 DNAH17Q9UFH2 4485 aa1.26□□□□□ -2.21
SKP1-212ENST00000523966 CCDC179H3BU77 68 aa1.25□□□□□ -2.21
SKP1-212ENST00000523966 UBR4Q5T4S7 5183 aa1.25□□□□□ -2.21
SKP1-212ENST00000523966 FAT2Q9NYQ8 4349 aa1.24□□□□□ -2.21
SKP1-212ENST00000523966 LOC101927531A0A1B0GV80 90 aa1.24□□□□□ -2.21
SKP1-212ENST00000523966 H0Y9P7 68 aa1.24□□□□□ -2.21
SKP1-212ENST00000523966 H7BZZ5 65 aa1.24□□□□□ -2.21
SKP1-212ENST00000523966 BRK1Q8WUW1 75 aa1.24□□□□□ -2.21
SKP1-212ENST00000523966 LINC00208Q96KT6 92 aa1.24□□□□□ -2.21
SKP1-212ENST00000523966 RETNLBQ9BQ08 111 aa1.24□□□□□ -2.21
SKP1-212ENST00000523966 DNAH11Q96DT5 4516 aa1.23□□□□□ -2.21
SKP1-212ENST00000523966 HYDINQ4G0P3 5121 aa1.23□□□□□ -2.21
SKP1-212ENST00000523966 PKD1P98161 4303 aa1.23□□□□□ -2.21
SKP1-212ENST00000523966 KMT2CQ8NEZ4 4911 aaKnown RBP1.23□□□□□ -2.21
SKP1-212ENST00000523966 SACSQ9NZJ4 4579 aa1.23□□□□□ -2.21
SKP1-212ENST00000523966 LRP1BQ9NZR2 4599 aa1.22□□□□□ -2.21
SKP1-212ENST00000523966 DNAH5Q8TE73 4624 aa1.21□□□□□ -2.22
SKP1-212ENST00000523966 MT1HL1P0DM35 61 aa1.21□□□□□ -2.22
SKP1-212ENST00000523966 ATP11AUNQ6ZP68 121 aa1.21□□□□□ -2.22
SKP1-212ENST00000523966 CYP4F30PQ9H0H9 118 aa1.21□□□□□ -2.22
SKP1-212ENST00000523966 SERP1Q9Y6X1 66 aa1.21□□□□□ -2.22
SKP1-212ENST00000523966 RYR2Q92736 4967 aa1.21□□□□□ -2.22
SKP1-212ENST00000523966 DNAH8Q96JB1 4490 aa1.21□□□□□ -2.22
SKP1-212ENST00000523966 C9orf92A6NGG3 77 aa1.2□□□□□ -2.22
SKP1-212ENST00000523966 ACYP2P14621 99 aa1.2□□□□□ -2.22
SKP1-212ENST00000523966 CRCT1Q9UGL9 99 aa1.2□□□□□ -2.22
SKP1-212ENST00000523966 DYNC1H1Q14204 4646 aaKnown RBP1.19□□□□□ -2.22
SKP1-212ENST00000523966 SPINK7P58062 85 aa1.19□□□□□ -2.22
SKP1-212ENST00000523966 ROMO1P60602 79 aa1.19□□□□□ -2.22
SKP1-212ENST00000523966 RPL37P61927 97 aaKnown RBP1.19□□□□□ -2.22
SKP1-212ENST00000523966 HSPG2P98160 4391 aa1.18□□□□□ -2.22
SKP1-212ENST00000523966 A6NN06 94 aa1.18□□□□□ -2.22
SKP1-212ENST00000523966 DMAC1Q96GE9 116 aa1.18□□□□□ -2.22
SKP1-212ENST00000523966 FAT1Q14517 4588 aa1.18□□□□□ -2.22
SKP1-212ENST00000523966 APOBP04114 4563 aaKnown RBP1.18□□□□□ -2.22
SKP1-212ENST00000523966 RYR3Q15413 4870 aa1.17□□□□□ -2.22
SKP1-212ENST00000523966 CHKB-CPT1BH3BT56 60 aa1.17□□□□□ -2.22
SKP1-212ENST00000523966 SPTSSBQ8NFR3 76 aa1.17□□□□□ -2.22
SKP1-212ENST00000523966 RYR1P21817 5038 aa1.16□□□□□ -2.22
SKP1-212ENST00000523966 KIAA1109Q2LD37 5005 aa1.16□□□□□ -2.22
SKP1-212ENST00000523966 COX6B2Q6YFQ2 88 aa1.16□□□□□ -2.22
SKP1-212ENST00000523966 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
SKP1-212ENST00000523966 PRR15LQ9BU68 103 aa1.15□□□□□ -2.23
SKP1-212ENST00000523966 TNXBP22105 4242 aa1.15□□□□□ -2.23
SKP1-212ENST00000523966 MYCBP2O75592 4640 aa1.14□□□□□ -2.23
SKP1-212ENST00000523966 LRP1Q07954 4544 aaKnown RBP1.14□□□□□ -2.23
SKP1-212ENST00000523966 LINC01558Q9Y6Z2 57 aa1.14□□□□□ -2.23
SKP1-212ENST00000523966 PCLOQ9Y6V0 5065 aa1.14□□□□□ -2.23
SKP1-212ENST00000523966 A0A1B0GU69 56 aa1.13□□□□□ -2.23
SKP1-212ENST00000523966 H1FX-AS1Q4G0G2 97 aa1.13□□□□□ -2.23
SKP1-212ENST00000523966 S4R3F8 94 aa1.12□□□□□ -2.23
SKP1-212ENST00000523966 EPPK1P58107 5090 aaKnown RBP1.11□□□□□ -2.23
SKP1-212ENST00000523966 CSAG1Q6PB30 78 aa1.11□□□□□ -2.23
SKP1-212ENST00000523966 BIRC6Q9NR09 4857 aa1.11□□□□□ -2.23
SKP1-212ENST00000523966 HERC2O95714 4834 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms