RNA–Protein interactions for RNA: ENST00000523504.5

TNFRSF10B-207, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-207ENST00000523504 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
TNFRSF10B-207ENST00000523504 SPANXA2-OT1Q8N9U9 137 aa10.36□□□□□ -0.75
TNFRSF10B-207ENST00000523504 NDUFC1O43677 76 aa10.32□□□□□ -0.76
TNFRSF10B-207ENST00000523504 KRTAP9-8Q9BYQ0 159 aa10.3□□□□□ -0.76
TNFRSF10B-207ENST00000523504 ACYP2P14621 99 aa10.27□□□□□ -0.77
TNFRSF10B-207ENST00000523504 CSAG1Q6PB30 78 aa10.24□□□□□ -0.77
TNFRSF10B-207ENST00000523504 MT2AP02795 61 aa10.23□□□□□ -0.77
TNFRSF10B-207ENST00000523504 MT1FP04733 61 aa10.17□□□□□ -0.78
TNFRSF10B-207ENST00000523504 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
TNFRSF10B-207ENST00000523504 COA5Q86WW8 74 aa10.1□□□□□ -0.79
TNFRSF10B-207ENST00000523504 KRTAP10-10P60014 251 aa10.08□□□□□ -0.8
TNFRSF10B-207ENST00000523504 PCP4P48539 62 aa10.06□□□□□ -0.8
TNFRSF10B-207ENST00000523504 TMEM258P61165 79 aa10.01□□□□□ -0.81
TNFRSF10B-207ENST00000523504 ATP5EP56381 51 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF10B-207ENST00000523504 ADM2Q7Z4H4 148 aa9.95□□□□□ -0.82
TNFRSF10B-207ENST00000523504 SPTSSBQ8NFR3 76 aa9.95□□□□□ -0.82
TNFRSF10B-207ENST00000523504 KRTAP9-3Q9BYQ3 159 aa9.95□□□□□ -0.82
TNFRSF10B-207ENST00000523504 H0YAA0 97 aa9.94□□□□□ -0.82
TNFRSF10B-207ENST00000523504 LCE2DQ5TA82 110 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF10B-207ENST00000523504 KRTAP9-2Q9BYQ4 174 aa9.88□□□□□ -0.83
TNFRSF10B-207ENST00000523504 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
TNFRSF10B-207ENST00000523504 P0C880 135 aa9.85□□□□□ -0.83
TNFRSF10B-207ENST00000523504 LCE2BO14633 110 aa9.79□□□□□ -0.84
TNFRSF10B-207ENST00000523504 KRTAP19-1Q8IUB9 90 aa9.78□□□□□ -0.84
TNFRSF10B-207ENST00000523504 SERP1Q9Y6X1 66 aa9.7□□□□□ -0.86
TNFRSF10B-207ENST00000523504 SPRR2GQ9BYE4 73 aa9.69□□□□□ -0.86
TNFRSF10B-207ENST00000523504 CRIPTQ9P021 101 aa9.68□□□□□ -0.86
TNFRSF10B-207ENST00000523504 USH2AO75445 5202 aa9.68□□□□□ -0.86
TNFRSF10B-207ENST00000523504 FSIP2Q5CZC0 6907 aa9.65□□□□□ -0.86
TNFRSF10B-207ENST00000523504 R4GN34 69 aa9.59□□□□□ -0.87
TNFRSF10B-207ENST00000523504 M0QZ58 72 aa9.58□□□□□ -0.88
TNFRSF10B-207ENST00000523504 SEC61GP60059 68 aa9.56□□□□□ -0.88
TNFRSF10B-207ENST00000523504 A0A1B0GU69 56 aa9.53□□□□□ -0.88
TNFRSF10B-207ENST00000523504 KRTAP19-8Q3LI54 63 aa9.53□□□□□ -0.88
TNFRSF10B-207ENST00000523504 MT1BP07438 61 aa9.5□□□□□ -0.89
TNFRSF10B-207ENST00000523504 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
TNFRSF10B-207ENST00000523504 LINC01558Q9Y6Z2 57 aa9.5□□□□□ -0.89
TNFRSF10B-207ENST00000523504 SSPOA2VEC9 5147 aa9.48□□□□□ -0.89
TNFRSF10B-207ENST00000523504 Q5VV11 94 aa9.46□□□□□ -0.9
TNFRSF10B-207ENST00000523504 LINC01554Q52M75 96 aa9.44□□□□□ -0.9
TNFRSF10B-207ENST00000523504 CRCT1Q9UGL9 99 aa9.41□□□□□ -0.9
TNFRSF10B-207ENST00000523504 A0A1B0GU33 70 aa9.4□□□□□ -0.9
TNFRSF10B-207ENST00000523504 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
TNFRSF10B-207ENST00000523504 SPATA8Q6RVD6 105 aa9.37□□□□□ -0.91
TNFRSF10B-207ENST00000523504 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
TNFRSF10B-207ENST00000523504 SMIM26A0A096LP01 95 aa9.35□□□□□ -0.91
TNFRSF10B-207ENST00000523504 Q1T7F1 81 aa9.32□□□□□ -0.92
TNFRSF10B-207ENST00000523504 KRTAP9-6A0A140TA67 174 aa9.31□□□□□ -0.92
TNFRSF10B-207ENST00000523504 PSPHP1O15172 72 aa9.27□□□□□ -0.93
TNFRSF10B-207ENST00000523504 KRTAP19-6Q3LI70 58 aa9.27□□□□□ -0.93
TNFRSF10B-207ENST00000523504 V9GYY9 64 aa9.27□□□□□ -0.93
TNFRSF10B-207ENST00000523504 A0A0D9SG42 100 aa9.24□□□□□ -0.93
TNFRSF10B-207ENST00000523504 PLAC4Q8WY50 150 aa9.21□□□□□ -0.94
TNFRSF10B-207ENST00000523504 A8MU10 97 aa9.17□□□□□ -0.94
TNFRSF10B-207ENST00000523504 A6NN06 94 aa9.15□□□□□ -0.95
TNFRSF10B-207ENST00000523504 FCGBPQ9Y6R7 5405 aaPredicted RBP9.13□□□□□ -0.95
TNFRSF10B-207ENST00000523504 UQCR11O14957 56 aa9.1□□□□□ -0.95
TNFRSF10B-207ENST00000523504 KRTAP10-5P60370 271 aa9.1□□□□□ -0.95
TNFRSF10B-207ENST00000523504 MT1XP80297 61 aa9.07□□□□□ -0.96
TNFRSF10B-207ENST00000523504 KRTAP12-1P59990 96 aa9.06□□□□□ -0.96
TNFRSF10B-207ENST00000523504 KRTAP12-2P59991 146 aa9.03□□□□□ -0.96
TNFRSF10B-207ENST00000523504 SPINT4Q6UDR6 99 aa9.03□□□□□ -0.96
TNFRSF10B-207ENST00000523504 MIR22HGQ0VDD5 57 aa9□□□□□ -0.97
TNFRSF10B-207ENST00000523504 A6NED7 52 aa8.93□□□□□ -0.98
TNFRSF10B-207ENST00000523504 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
TNFRSF10B-207ENST00000523504 CAMK2N1Q7Z7J9 78 aa8.91□□□□□ -0.98
TNFRSF10B-207ENST00000523504 MACF1Q9UPN3 7388 aaKnown RBP8.78□□□□□ -1
TNFRSF10B-207ENST00000523504 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.77□□□□□ -1
TNFRSF10B-207ENST00000523504 KRTAP10-7P60409 375 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF10B-207ENST00000523504 CDC42SE1Q9NRR8 79 aa8.67□□□□□ -1.02
TNFRSF10B-207ENST00000523504 SYNE2Q8WXH0 6885 aaKnown RBP8.62□□□□□ -1.03
TNFRSF10B-207ENST00000523504 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
TNFRSF10B-207ENST00000523504 KMT2DO14686 5537 aa8.62□□□□□ -1.03
TNFRSF10B-207ENST00000523504 K7ERS5 55 aa8.59□□□□□ -1.03
TNFRSF10B-207ENST00000523504 KRTAP10-12P60413 245 aa8.57□□□□□ -1.04
TNFRSF10B-207ENST00000523504 KRTAP4-8A0A0G2JLE6 195 aa8.52□□□□□ -1.05
TNFRSF10B-207ENST00000523504 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
TNFRSF10B-207ENST00000523504 KRTAP9-7A8MTY7 169 aa8.45□□□□□ -1.06
TNFRSF10B-207ENST00000523504 BRK1Q8WUW1 75 aa8.45□□□□□ -1.06
TNFRSF10B-207ENST00000523504 SVIPQ8NHG7 77 aa8.44□□□□□ -1.06
TNFRSF10B-207ENST00000523504 TNP1P09430 55 aa8.37□□□□□ -1.07
TNFRSF10B-207ENST00000523504 KRTAP8-1Q8IUC2 63 aa8.36□□□□□ -1.07
TNFRSF10B-207ENST00000523504 KRTAP6-3Q3LI67 103 aa8.35□□□□□ -1.07
TNFRSF10B-207ENST00000523504 KRTAP5-9P26371 169 aa8.26□□□□□ -1.09
TNFRSF10B-207ENST00000523504 ROMO1P60602 79 aa8.23□□□□□ -1.09
TNFRSF10B-207ENST00000523504 LCE3AQ5TA76 89 aa8.21□□□□□ -1.09
TNFRSF10B-207ENST00000523504 SPRR2FQ96RM1 72 aa8.2□□□□□ -1.1
TNFRSF10B-207ENST00000523504 KRTAP25-1Q3LHN0 102 aa8.19□□□□□ -1.1
TNFRSF10B-207ENST00000523504 MUC12Q9UKN1 5478 aa8.16□□□□□ -1.1
TNFRSF10B-207ENST00000523504 KRTAP19-7Q3SYF9 63 aa8.1□□□□□ -1.11
TNFRSF10B-207ENST00000523504 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
TNFRSF10B-207ENST00000523504 MDN1Q9NU22 5596 aa8.01□□□□□ -1.13
TNFRSF10B-207ENST00000523504 MT1EP04732 61 aa7.98□□□□□ -1.13
TNFRSF10B-207ENST00000523504 NEBP20929 6669 aa7.94□□□□□ -1.14
TNFRSF10B-207ENST00000523504 SPRR2EP22531 72 aa7.94□□□□□ -1.14
TNFRSF10B-207ENST00000523504 SPRR2BP35325 72 aa7.94□□□□□ -1.14
TNFRSF10B-207ENST00000523504 SPRR2AP35326 72 aa7.94□□□□□ -1.14
TNFRSF10B-207ENST00000523504 PMAIP1Q13794 54 aa7.93□□□□□ -1.14
TNFRSF10B-207ENST00000523504 LCE1AQ5T7P2 110 aa7.92□□□□□ -1.14
TNFRSF10B-207ENST00000523504 PRO0628Q9UI54 55 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms