RNA–Protein interactions for RNA: ENST00000523308.5

DENND3-221, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-221ENST00000523308 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
DENND3-221ENST00000523308 C9orf92A6NGG3 77 aa6.67□□□□□ -1.34
DENND3-221ENST00000523308 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
DENND3-221ENST00000523308 SACSQ9NZJ4 4579 aa6.66□□□□□ -1.34
DENND3-221ENST00000523308 DYNC1H1Q14204 4646 aaKnown RBP6.66□□□□□ -1.34
DENND3-221ENST00000523308 R4GN34 69 aa6.63□□□□□ -1.35
DENND3-221ENST00000523308 DMBT1Q9UGM3 2413 aaPredicted RBP6.6□□□□□ -1.35
DENND3-221ENST00000523308 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
DENND3-221ENST00000523308 LRP1Q07954 4544 aaKnown RBP6.51□□□□□ -1.37
DENND3-221ENST00000523308 APOBP04114 4563 aaKnown RBP6.51□□□□□ -1.37
DENND3-221ENST00000523308 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
DENND3-221ENST00000523308 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
DENND3-221ENST00000523308 MYCBP2O75592 4640 aa6.49□□□□□ -1.37
DENND3-221ENST00000523308 LCE2DQ5TA82 110 aaPredicted RBP6.48□□□□□ -1.37
DENND3-221ENST00000523308 KRTAP10-8P60410 259 aa6.46□□□□□ -1.37
DENND3-221ENST00000523308 KRTAP3-1Q9BYR8 98 aa6.43□□□□□ -1.38
DENND3-221ENST00000523308 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
DENND3-221ENST00000523308 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
DENND3-221ENST00000523308 COX6B2Q6YFQ2 88 aa6.41□□□□□ -1.38
DENND3-221ENST00000523308 A0A1B0GVY2 172 aa6.39□□□□□ -1.39
DENND3-221ENST00000523308 RYR2Q92736 4967 aa6.38□□□□□ -1.39
DENND3-221ENST00000523308 HSPG2P98160 4391 aa6.37□□□□□ -1.39
DENND3-221ENST00000523308 RPS29P62273 56 aaKnown RBP6.36□□□□□ -1.39
DENND3-221ENST00000523308 XP32Q5T750 250 aa6.35□□□□□ -1.39
DENND3-221ENST00000523308 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
DENND3-221ENST00000523308 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
DENND3-221ENST00000523308 TNXBP22105 4242 aa6.27□□□□□ -1.41
DENND3-221ENST00000523308 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
DENND3-221ENST00000523308 A0A0D9SG42 100 aa6.24□□□□□ -1.41
DENND3-221ENST00000523308 KIAA1109Q2LD37 5005 aa6.24□□□□□ -1.41
DENND3-221ENST00000523308 RYR3Q15413 4870 aa6.22□□□□□ -1.41
DENND3-221ENST00000523308 Q5VSD8 79 aa6.22□□□□□ -1.41
DENND3-221ENST00000523308 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
DENND3-221ENST00000523308 INE1O15225 51 aa6.21□□□□□ -1.42
DENND3-221ENST00000523308 LPAP08519 4548 aa6.19□□□□□ -1.42
DENND3-221ENST00000523308 S4R3F8 94 aa6.18□□□□□ -1.42
DENND3-221ENST00000523308 LRP2P98164 4655 aa6.15□□□□□ -1.43
DENND3-221ENST00000523308 RYR1P21817 5038 aa6.14□□□□□ -1.43
DENND3-221ENST00000523308 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
DENND3-221ENST00000523308 LCE2BO14633 110 aa6.08□□□□□ -1.44
DENND3-221ENST00000523308 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
DENND3-221ENST00000523308 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
DENND3-221ENST00000523308 EPPK1P58107 5090 aaKnown RBP6.03□□□□□ -1.44
DENND3-221ENST00000523308 ABCA13Q86UQ4 5058 aa6.02□□□□□ -1.45
DENND3-221ENST00000523308 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
DENND3-221ENST00000523308 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
DENND3-221ENST00000523308 BIRC6Q9NR09 4857 aa5.91□□□□□ -1.46
DENND3-221ENST00000523308 KRTAP4-5Q9BYR2 181 aa5.91□□□□□ -1.46
DENND3-221ENST00000523308 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
DENND3-221ENST00000523308 MUC2Q02817 5179 aa5.77□□□□□ -1.49
DENND3-221ENST00000523308 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
DENND3-221ENST00000523308 M0QZ58 72 aa5.73□□□□□ -1.49
DENND3-221ENST00000523308 KRTAP4-1Q9BYQ7 146 aa5.7□□□□□ -1.5
DENND3-221ENST00000523308 LORP23490 312 aaPredicted RBP5.7□□□□□ -1.5
DENND3-221ENST00000523308 HERC2O95714 4834 aa5.7□□□□□ -1.5
DENND3-221ENST00000523308 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
DENND3-221ENST00000523308 HERC1Q15751 4861 aa5.53□□□□□ -1.52
DENND3-221ENST00000523308 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
DENND3-221ENST00000523308 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
DENND3-221ENST00000523308 PCLOQ9Y6V0 5065 aa5.44□□□□□ -1.54
DENND3-221ENST00000523308 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
DENND3-221ENST00000523308 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
DENND3-221ENST00000523308 HMCN2Q8NDA2 5059 aa5.29□□□□□ -1.56
DENND3-221ENST00000523308 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
DENND3-221ENST00000523308 M0R2T5 61 aa5.19□□□□□ -1.58
DENND3-221ENST00000523308 TNP1P09430 55 aa5.12□□□□□ -1.59
DENND3-221ENST00000523308 KRTAP10-10P60014 251 aa5.1□□□□□ -1.59
DENND3-221ENST00000523308 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
DENND3-221ENST00000523308 MT1HP80294 61 aa5.03□□□□□ -1.6
DENND3-221ENST00000523308 MT1FP04733 61 aa5.01□□□□□ -1.61
DENND3-221ENST00000523308 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
DENND3-221ENST00000523308 MT2AP02795 61 aa4.97□□□□□ -1.61
DENND3-221ENST00000523308 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
DENND3-221ENST00000523308 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
DENND3-221ENST00000523308 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
DENND3-221ENST00000523308 USH2AO75445 5202 aa4.83□□□□□ -1.64
DENND3-221ENST00000523308 MT1BP07438 61 aa4.8□□□□□ -1.64
DENND3-221ENST00000523308 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
DENND3-221ENST00000523308 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
DENND3-221ENST00000523308 MT1XP80297 61 aa4.77□□□□□ -1.65
DENND3-221ENST00000523308 KMT2DO14686 5537 aa4.76□□□□□ -1.65
DENND3-221ENST00000523308 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
DENND3-221ENST00000523308 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
DENND3-221ENST00000523308 KRTAP9-2Q9BYQ4 174 aa4.69□□□□□ -1.66
DENND3-221ENST00000523308 KRTAP10-12P60413 245 aa4.68□□□□□ -1.66
DENND3-221ENST00000523308 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
DENND3-221ENST00000523308 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
DENND3-221ENST00000523308 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
DENND3-221ENST00000523308 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.66
DENND3-221ENST00000523308 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
DENND3-221ENST00000523308 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.67
DENND3-221ENST00000523308 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
DENND3-221ENST00000523308 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
DENND3-221ENST00000523308 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
DENND3-221ENST00000523308 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
DENND3-221ENST00000523308 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
DENND3-221ENST00000523308 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
DENND3-221ENST00000523308 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
DENND3-221ENST00000523308 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
DENND3-221ENST00000523308 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms