RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
RAB11FIP1-204ENST00000522774 UQCR11O14957 56 aa5.67□□□□□ -1.5
RAB11FIP1-204ENST00000522774 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
RAB11FIP1-204ENST00000522774 MIR22HGQ0VDD5 57 aa5.66□□□□□ -1.5
RAB11FIP1-204ENST00000522774 COX6B2Q6YFQ2 88 aa5.63□□□□□ -1.51
RAB11FIP1-204ENST00000522774 XP32Q5T750 250 aa5.61□□□□□ -1.51
RAB11FIP1-204ENST00000522774 EPPK1P58107 5090 aaKnown RBP5.61□□□□□ -1.51
RAB11FIP1-204ENST00000522774 RPL37P61927 97 aaKnown RBP5.61□□□□□ -1.51
RAB11FIP1-204ENST00000522774 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
RAB11FIP1-204ENST00000522774 H0YAA0 97 aa5.54□□□□□ -1.52
RAB11FIP1-204ENST00000522774 ADM2Q7Z4H4 148 aa5.54□□□□□ -1.52
RAB11FIP1-204ENST00000522774 LPAP08519 4548 aa5.52□□□□□ -1.53
RAB11FIP1-204ENST00000522774 A0A1B0GU33 70 aa5.52□□□□□ -1.53
RAB11FIP1-204ENST00000522774 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
RAB11FIP1-204ENST00000522774 LRP2P98164 4655 aa5.5□□□□□ -1.53
RAB11FIP1-204ENST00000522774 KRTAP3-3Q9BYR6 98 aa5.5□□□□□ -1.53
RAB11FIP1-204ENST00000522774 ABCA13Q86UQ4 5058 aa5.46□□□□□ -1.53
RAB11FIP1-204ENST00000522774 KRTAP4-5Q9BYR2 181 aa5.44□□□□□ -1.54
RAB11FIP1-204ENST00000522774 S4R3F8 94 aa5.44□□□□□ -1.54
RAB11FIP1-204ENST00000522774 ROMO1P60602 79 aa5.43□□□□□ -1.54
RAB11FIP1-204ENST00000522774 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
RAB11FIP1-204ENST00000522774 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
RAB11FIP1-204ENST00000522774 SEC61BP60468 96 aaKnown RBP5.41□□□□□ -1.54
RAB11FIP1-204ENST00000522774 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
RAB11FIP1-204ENST00000522774 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
RAB11FIP1-204ENST00000522774 KRTAP13-4Q3LI77 160 aa5.37□□□□□ -1.55
RAB11FIP1-204ENST00000522774 P0C880 135 aa5.34□□□□□ -1.55
RAB11FIP1-204ENST00000522774 A0A0D9SG42 100 aa5.3□□□□□ -1.56
RAB11FIP1-204ENST00000522774 HERC2O95714 4834 aa5.28□□□□□ -1.56
RAB11FIP1-204ENST00000522774 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
RAB11FIP1-204ENST00000522774 K7ERS5 55 aa5.27□□□□□ -1.57
RAB11FIP1-204ENST00000522774 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
RAB11FIP1-204ENST00000522774 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
RAB11FIP1-204ENST00000522774 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
RAB11FIP1-204ENST00000522774 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
RAB11FIP1-204ENST00000522774 KRTAP12-2P59991 146 aa5.17□□□□□ -1.58
RAB11FIP1-204ENST00000522774 BIRC6Q9NR09 4857 aa5.16□□□□□ -1.58
RAB11FIP1-204ENST00000522774 NDUFAF8A1L188 74 aa5.15□□□□□ -1.59
RAB11FIP1-204ENST00000522774 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
RAB11FIP1-204ENST00000522774 M0QZ58 72 aa5.12□□□□□ -1.59
RAB11FIP1-204ENST00000522774 SPINT4Q6UDR6 99 aa5.11□□□□□ -1.59
RAB11FIP1-204ENST00000522774 MUC2Q02817 5179 aa5.1□□□□□ -1.59
RAB11FIP1-204ENST00000522774 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.59
RAB11FIP1-204ENST00000522774 LORP23490 312 aaPredicted RBP5.05□□□□□ -1.6
RAB11FIP1-204ENST00000522774 HERC1Q15751 4861 aa5.05□□□□□ -1.6
RAB11FIP1-204ENST00000522774 R4GN34 69 aa5.03□□□□□ -1.6
RAB11FIP1-204ENST00000522774 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
RAB11FIP1-204ENST00000522774 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
RAB11FIP1-204ENST00000522774 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
RAB11FIP1-204ENST00000522774 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
RAB11FIP1-204ENST00000522774 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
RAB11FIP1-204ENST00000522774 FAT4Q6V0I7 4981 aa4.87□□□□□ -1.63
RAB11FIP1-204ENST00000522774 LCE2CQ5TA81 110 aa4.82□□□□□ -1.64
RAB11FIP1-204ENST00000522774 CAMK2N1Q7Z7J9 78 aa4.8□□□□□ -1.64
RAB11FIP1-204ENST00000522774 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
RAB11FIP1-204ENST00000522774 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
RAB11FIP1-204ENST00000522774 MT1HP80294 61 aa4.69□□□□□ -1.66
RAB11FIP1-204ENST00000522774 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
RAB11FIP1-204ENST00000522774 M0R2T5 61 aa4.67□□□□□ -1.66
RAB11FIP1-204ENST00000522774 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
RAB11FIP1-204ENST00000522774 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
RAB11FIP1-204ENST00000522774 MT1FP04733 61 aa4.6□□□□□ -1.67
RAB11FIP1-204ENST00000522774 MT2AP02795 61 aa4.59□□□□□ -1.67
RAB11FIP1-204ENST00000522774 PP632Q6XCG6 107 aa4.59□□□□□ -1.68
RAB11FIP1-204ENST00000522774 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
RAB11FIP1-204ENST00000522774 TNP1P09430 55 aa4.57□□□□□ -1.68
RAB11FIP1-204ENST00000522774 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
RAB11FIP1-204ENST00000522774 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
RAB11FIP1-204ENST00000522774 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
RAB11FIP1-204ENST00000522774 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
RAB11FIP1-204ENST00000522774 MT1BP07438 61 aa4.42□□□□□ -1.7
RAB11FIP1-204ENST00000522774 PRO2289Q9P1D8 64 aa4.42□□□□□ -1.7
RAB11FIP1-204ENST00000522774 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
RAB11FIP1-204ENST00000522774 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
RAB11FIP1-204ENST00000522774 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
RAB11FIP1-204ENST00000522774 KRTAP10-5P60370 271 aa4.37□□□□□ -1.71
RAB11FIP1-204ENST00000522774 MT1XP80297 61 aa4.36□□□□□ -1.71
RAB11FIP1-204ENST00000522774 LCE2BO14633 110 aa4.31□□□□□ -1.72
RAB11FIP1-204ENST00000522774 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
RAB11FIP1-204ENST00000522774 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
RAB11FIP1-204ENST00000522774 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
RAB11FIP1-204ENST00000522774 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
RAB11FIP1-204ENST00000522774 USH2AO75445 5202 aa4.22□□□□□ -1.73
RAB11FIP1-204ENST00000522774 KRTAP12-3P60328 96 aa4.15□□□□□ -1.74
RAB11FIP1-204ENST00000522774 KMT2DO14686 5537 aa4.1□□□□□ -1.75
RAB11FIP1-204ENST00000522774 INE1O15225 51 aa4.1□□□□□ -1.75
RAB11FIP1-204ENST00000522774 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
RAB11FIP1-204ENST00000522774 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
RAB11FIP1-204ENST00000522774 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
RAB11FIP1-204ENST00000522774 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
RAB11FIP1-204ENST00000522774 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
RAB11FIP1-204ENST00000522774 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
RAB11FIP1-204ENST00000522774 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
RAB11FIP1-204ENST00000522774 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
RAB11FIP1-204ENST00000522774 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
RAB11FIP1-204ENST00000522774 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
RAB11FIP1-204ENST00000522774 MT1EP04732 61 aa3.78□□□□□ -1.8
RAB11FIP1-204ENST00000522774 MT1LQ93083 61 aa3.76□□□□□ -1.81
RAB11FIP1-204ENST00000522774 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
RAB11FIP1-204ENST00000522774 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 289.2 ms