RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 HERC2O95714 4834 aa13.35□□□□□ -0.27
COL13A1-214ENST00000522165 CDC42SE1Q9NRR8 79 aa13.33□□□□□ -0.28
COL13A1-214ENST00000522165 J3QL48 77 aa13.3□□□□□ -0.28
COL13A1-214ENST00000522165 KTN1-AS1Q86SY8 53 aa13.29□□□□□ -0.28
COL13A1-214ENST00000522165 LRP2P98164 4655 aa13.28□□□□□ -0.28
COL13A1-214ENST00000522165 LPAP08519 4548 aa13.24□□□□□ -0.29
COL13A1-214ENST00000522165 A6NN06 94 aa13.24□□□□□ -0.29
COL13A1-214ENST00000522165 UQCR11O14957 56 aa13.06□□□□□ -0.32
COL13A1-214ENST00000522165 KRTAP3-3Q9BYR6 98 aa13.05□□□□□ -0.32
COL13A1-214ENST00000522165 S4R3F8 94 aa13.03□□□□□ -0.32
COL13A1-214ENST00000522165 RBM12B-AS1Q9P1G2 102 aa13.02□□□□□ -0.33
COL13A1-214ENST00000522165 SEC61BP60468 96 aaKnown RBP13.01□□□□□ -0.33
COL13A1-214ENST00000522165 H1FX-AS1Q4G0G2 97 aa13.01□□□□□ -0.33
COL13A1-214ENST00000522165 SPATA8Q6RVD6 105 aa13□□□□□ -0.33
COL13A1-214ENST00000522165 MIR22HGQ0VDD5 57 aa12.97□□□□□ -0.33
COL13A1-214ENST00000522165 A0A1B0GU33 70 aa12.84□□□□□ -0.35
COL13A1-214ENST00000522165 MUC17Q685J3 4493 aa12.8□□□□□ -0.36
COL13A1-214ENST00000522165 KRTAP4-1Q9BYQ7 146 aa12.79□□□□□ -0.36
COL13A1-214ENST00000522165 PCLOQ9Y6V0 5065 aa12.77□□□□□ -0.36
COL13A1-214ENST00000522165 H0YAA0 97 aa12.75□□□□□ -0.37
COL13A1-214ENST00000522165 KRTAP10-6P60371 365 aaPredicted RBP12.73□□□□□ -0.37
COL13A1-214ENST00000522165 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.37
COL13A1-214ENST00000522165 CSAG1Q6PB30 78 aa12.66□□□□□ -0.38
COL13A1-214ENST00000522165 HERC1Q15751 4861 aa12.63□□□□□ -0.39
COL13A1-214ENST00000522165 HMCN2Q8NDA2 5059 aa12.57□□□□□ -0.4
COL13A1-214ENST00000522165 P0C880 135 aa12.56□□□□□ -0.4
COL13A1-214ENST00000522165 ADM2Q7Z4H4 148 aa12.53□□□□□ -0.4
COL13A1-214ENST00000522165 KRTAP19-2Q3LHN2 52 aa12.52□□□□□ -0.4
COL13A1-214ENST00000522165 PRAC1Q96KF2 57 aa12.51□□□□□ -0.41
COL13A1-214ENST00000522165 KRTAP13-4Q3LI77 160 aa12.47□□□□□ -0.41
COL13A1-214ENST00000522165 LINC01554Q52M75 96 aa12.34□□□□□ -0.43
COL13A1-214ENST00000522165 MUC2Q02817 5179 aa12.33□□□□□ -0.44
COL13A1-214ENST00000522165 A0A0D9SG42 100 aa12.27□□□□□ -0.45
COL13A1-214ENST00000522165 K7ERS5 55 aa12.24□□□□□ -0.45
COL13A1-214ENST00000522165 FLGP20930 4061 aaPredicted RBP12.23□□□□□ -0.45
COL13A1-214ENST00000522165 M0QZ58 72 aa12.21□□□□□ -0.45
COL13A1-214ENST00000522165 LCE2CQ5TA81 110 aa12.02□□□□□ -0.48
COL13A1-214ENST00000522165 R4GN34 69 aa12.02□□□□□ -0.48
COL13A1-214ENST00000522165 LORP23490 312 aaPredicted RBP12.01□□□□□ -0.49
COL13A1-214ENST00000522165 KRTAP12-2P59991 146 aa12.01□□□□□ -0.49
COL13A1-214ENST00000522165 KRTAP12-1P59990 96 aa11.99□□□□□ -0.49
COL13A1-214ENST00000522165 RNF213Q63HN8 5207 aa11.96□□□□□ -0.49
COL13A1-214ENST00000522165 UBR4Q5T4S7 5183 aa11.94□□□□□ -0.5
COL13A1-214ENST00000522165 SPINT4Q6UDR6 99 aa11.93□□□□□ -0.5
COL13A1-214ENST00000522165 KRTAP25-1Q3LHN0 102 aa11.86□□□□□ -0.51
COL13A1-214ENST00000522165 ROMO1P60602 79 aa11.85□□□□□ -0.51
COL13A1-214ENST00000522165 FAT4Q6V0I7 4981 aa11.79□□□□□ -0.52
COL13A1-214ENST00000522165 MT1HP80294 61 aa11.74□□□□□ -0.53
COL13A1-214ENST00000522165 CRIPTQ9P021 101 aa11.69□□□□□ -0.54
COL13A1-214ENST00000522165 M0R2T5 61 aa11.66□□□□□ -0.54
COL13A1-214ENST00000522165 H3BS24 57 aa11.57□□□□□ -0.56
COL13A1-214ENST00000522165 MT2AP02795 61 aa11.39□□□□□ -0.59
COL13A1-214ENST00000522165 SPRR2GQ9BYE4 73 aa11.39□□□□□ -0.59
COL13A1-214ENST00000522165 KRTAP9-8Q9BYQ0 159 aa11.39□□□□□ -0.59
COL13A1-214ENST00000522165 MT1FP04733 61 aa11.36□□□□□ -0.59
COL13A1-214ENST00000522165 KRTAP19-1Q8IUB9 90 aa11.34□□□□□ -0.59
COL13A1-214ENST00000522165 C10orf95Q9H7T3 257 aa11.34□□□□□ -0.59
COL13A1-214ENST00000522165 CAMK2N1Q7Z7J9 78 aa11.32□□□□□ -0.6
COL13A1-214ENST00000522165 KRTAP10-10P60014 251 aa11.31□□□□□ -0.6
COL13A1-214ENST00000522165 PLAC4Q8WY50 150 aa11.1□□□□□ -0.63
COL13A1-214ENST00000522165 KRTAP19-8Q3LI54 63 aa11□□□□□ -0.65
COL13A1-214ENST00000522165 KRTAP9-3Q9BYQ3 159 aa10.95□□□□□ -0.66
COL13A1-214ENST00000522165 KRTAP15-1Q3LI76 137 aa10.92□□□□□ -0.66
COL13A1-214ENST00000522165 LCE2AQ5TA79 106 aaPredicted RBP10.91□□□□□ -0.66
COL13A1-214ENST00000522165 MT1BP07438 61 aa10.85□□□□□ -0.67
COL13A1-214ENST00000522165 TNP1P09430 55 aa10.85□□□□□ -0.67
COL13A1-214ENST00000522165 PP632Q6XCG6 107 aa10.77□□□□□ -0.69
COL13A1-214ENST00000522165 NDUFAF8A1L188 74 aa10.64□□□□□ -0.71
COL13A1-214ENST00000522165 KRTAP23-1A1A580 65 aa10.64□□□□□ -0.71
COL13A1-214ENST00000522165 MT1XP80297 61 aa10.61□□□□□ -0.71
COL13A1-214ENST00000522165 KRTAP10-5P60370 271 aa10.61□□□□□ -0.71
COL13A1-214ENST00000522165 LCE2BO14633 110 aa10.58□□□□□ -0.72
COL13A1-214ENST00000522165 PRO2289Q9P1D8 64 aa10.36□□□□□ -0.75
COL13A1-214ENST00000522165 LCE3AQ5TA76 89 aa10.35□□□□□ -0.75
COL13A1-214ENST00000522165 KRTAP10-7P60409 375 aaPredicted RBP10.23□□□□□ -0.77
COL13A1-214ENST00000522165 USH2AO75445 5202 aa10.22□□□□□ -0.77
COL13A1-214ENST00000522165 KRTAP10-12P60413 245 aa10.19□□□□□ -0.78
COL13A1-214ENST00000522165 KRTAP8-1Q8IUC2 63 aa10.13□□□□□ -0.79
COL13A1-214ENST00000522165 KRTAP12-3P60328 96 aa9.9□□□□□ -0.82
COL13A1-214ENST00000522165 SSPOA2VEC9 5147 aa9.86□□□□□ -0.83
COL13A1-214ENST00000522165 LUZP6Q538Z0 58 aa9.83□□□□□ -0.84
COL13A1-214ENST00000522165 SPRR5A0A1B0GTR4 108 aa9.79□□□□□ -0.84
COL13A1-214ENST00000522165 KRTAP19-6Q3LI70 58 aa9.77□□□□□ -0.85
COL13A1-214ENST00000522165 KRTAP4-8A0A0G2JLE6 195 aa9.72□□□□□ -0.85
COL13A1-214ENST00000522165 KRTAP4-8Q9BYQ9 185 aa9.72□□□□□ -0.85
COL13A1-214ENST00000522165 KRTAP19-5Q3LI72 72 aa9.7□□□□□ -0.86
COL13A1-214ENST00000522165 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
COL13A1-214ENST00000522165 KMT2DO14686 5537 aa9.68□□□□□ -0.86
COL13A1-214ENST00000522165 FSIP2Q5CZC0 6907 aa9.59□□□□□ -0.87
COL13A1-214ENST00000522165 A0A0A0MQY5 61 aa9.58□□□□□ -0.88
COL13A1-214ENST00000522165 KRTAP9-2Q9BYQ4 174 aa9.51□□□□□ -0.89
COL13A1-214ENST00000522165 KRTAP19-7Q3SYF9 63 aa9.46□□□□□ -0.89
COL13A1-214ENST00000522165 FCGBPQ9Y6R7 5405 aaPredicted RBP9.3□□□□□ -0.92
COL13A1-214ENST00000522165 LCE3CQ5T5A8 94 aa9.29□□□□□ -0.92
COL13A1-214ENST00000522165 MT1EP04732 61 aa9.25□□□□□ -0.93
COL13A1-214ENST00000522165 MT1LQ93083 61 aa9.14□□□□□ -0.95
COL13A1-214ENST00000522165 KRTAP19-4Q3LI73 84 aa9.11□□□□□ -0.95
COL13A1-214ENST00000522165 CRCT1Q9UGL9 99 aa9.1□□□□□ -0.95
COL13A1-214ENST00000522165 KRTAP4-7Q9BYR0 210 aa8.99□□□□□ -0.97
COL13A1-214ENST00000522165 KRTAP9-6A0A140TA67 174 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms