RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 DNAH6Q9C0G6 4158 aa6.22□□□□□ -1.41
CPEB4-208ENST00000520867 R4GN34 69 aa6.2□□□□□ -1.42
CPEB4-208ENST00000520867 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
CPEB4-208ENST00000520867 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
CPEB4-208ENST00000520867 DNHD1Q96M86 4753 aa6.15□□□□□ -1.43
CPEB4-208ENST00000520867 M0QZ58 72 aa6.14□□□□□ -1.43
CPEB4-208ENST00000520867 PLECQ15149 4684 aaKnown RBP6.12□□□□□ -1.43
CPEB4-208ENST00000520867 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
CPEB4-208ENST00000520867 LRP1BQ9NZR2 4599 aa6.04□□□□□ -1.44
CPEB4-208ENST00000520867 INE1O15225 51 aa6.02□□□□□ -1.45
CPEB4-208ENST00000520867 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
CPEB4-208ENST00000520867 APOBP04114 4563 aaKnown RBP6□□□□□ -1.45
CPEB4-208ENST00000520867 KRTAP10-2P60368 255 aa6□□□□□ -1.45
CPEB4-208ENST00000520867 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
CPEB4-208ENST00000520867 KRTAP10-1P60331 282 aa5.95□□□□□ -1.46
CPEB4-208ENST00000520867 PKHD1P08F94 4074 aa5.94□□□□□ -1.46
CPEB4-208ENST00000520867 DNAH5Q8TE73 4624 aa5.91□□□□□ -1.46
CPEB4-208ENST00000520867 STARD9Q9P2P6 4700 aa5.87□□□□□ -1.47
CPEB4-208ENST00000520867 SACSQ9NZJ4 4579 aa5.81□□□□□ -1.48
CPEB4-208ENST00000520867 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
CPEB4-208ENST00000520867 PKHD1L1Q86WI1 4243 aa5.75□□□□□ -1.49
CPEB4-208ENST00000520867 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
CPEB4-208ENST00000520867 HSPG2P98160 4391 aa5.68□□□□□ -1.5
CPEB4-208ENST00000520867 PKD1P98161 4303 aa5.64□□□□□ -1.51
CPEB4-208ENST00000520867 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
CPEB4-208ENST00000520867 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
CPEB4-208ENST00000520867 SMR3BP02814 79 aaPredicted RBP5.56□□□□□ -1.52
CPEB4-208ENST00000520867 TNXBP22105 4242 aa5.53□□□□□ -1.52
CPEB4-208ENST00000520867 Q5VSD8 79 aa5.52□□□□□ -1.53
CPEB4-208ENST00000520867 TNP1P09430 55 aa5.51□□□□□ -1.53
CPEB4-208ENST00000520867 FAT3Q8TDW7 4589 aa5.49□□□□□ -1.53
CPEB4-208ENST00000520867 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
CPEB4-208ENST00000520867 KRTAP10-4P60372 401 aaPredicted RBP5.48□□□□□ -1.53
CPEB4-208ENST00000520867 LPAP08519 4548 aa5.47□□□□□ -1.53
CPEB4-208ENST00000520867 BIRC6Q9NR09 4857 aa5.46□□□□□ -1.54
CPEB4-208ENST00000520867 RYR3Q15413 4870 aa5.41□□□□□ -1.54
CPEB4-208ENST00000520867 A0A1B0GVY2 172 aa5.4□□□□□ -1.55
CPEB4-208ENST00000520867 KRTAP17-1Q9BYP8 105 aa5.4□□□□□ -1.55
CPEB4-208ENST00000520867 KMT2CQ8NEZ4 4911 aaKnown RBP5.4□□□□□ -1.55
CPEB4-208ENST00000520867 FAT1Q14517 4588 aa5.37□□□□□ -1.55
CPEB4-208ENST00000520867 RYR2Q92736 4967 aa5.3□□□□□ -1.56
CPEB4-208ENST00000520867 HYDINQ4G0P3 5121 aa5.28□□□□□ -1.56
CPEB4-208ENST00000520867 KRTAP10-10P60014 251 aa5.22□□□□□ -1.57
CPEB4-208ENST00000520867 HERC2O95714 4834 aa5.21□□□□□ -1.58
CPEB4-208ENST00000520867 EPPK1P58107 5090 aaKnown RBP5.2□□□□□ -1.58
CPEB4-208ENST00000520867 LRP2P98164 4655 aa5.16□□□□□ -1.58
CPEB4-208ENST00000520867 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
CPEB4-208ENST00000520867 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
CPEB4-208ENST00000520867 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
CPEB4-208ENST00000520867 PCLOQ9Y6V0 5065 aa4.98□□□□□ -1.61
CPEB4-208ENST00000520867 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
CPEB4-208ENST00000520867 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
CPEB4-208ENST00000520867 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
CPEB4-208ENST00000520867 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
CPEB4-208ENST00000520867 KIAA1109Q2LD37 5005 aa4.83□□□□□ -1.64
CPEB4-208ENST00000520867 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
CPEB4-208ENST00000520867 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
CPEB4-208ENST00000520867 KRTAP4-1Q9BYQ7 146 aa4.82□□□□□ -1.64
CPEB4-208ENST00000520867 RYR1P21817 5038 aa4.81□□□□□ -1.64
CPEB4-208ENST00000520867 ABCA13Q86UQ4 5058 aa4.78□□□□□ -1.64
CPEB4-208ENST00000520867 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
CPEB4-208ENST00000520867 HERC1Q15751 4861 aa4.72□□□□□ -1.65
CPEB4-208ENST00000520867 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
CPEB4-208ENST00000520867 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
CPEB4-208ENST00000520867 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
CPEB4-208ENST00000520867 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
CPEB4-208ENST00000520867 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
CPEB4-208ENST00000520867 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
CPEB4-208ENST00000520867 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
CPEB4-208ENST00000520867 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
CPEB4-208ENST00000520867 MUC2Q02817 5179 aa4.54□□□□□ -1.68
CPEB4-208ENST00000520867 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
CPEB4-208ENST00000520867 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
CPEB4-208ENST00000520867 MT1XP80297 61 aa4.44□□□□□ -1.7
CPEB4-208ENST00000520867 M0R2T5 61 aa4.42□□□□□ -1.7
CPEB4-208ENST00000520867 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
CPEB4-208ENST00000520867 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
CPEB4-208ENST00000520867 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
CPEB4-208ENST00000520867 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
CPEB4-208ENST00000520867 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
CPEB4-208ENST00000520867 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
CPEB4-208ENST00000520867 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
CPEB4-208ENST00000520867 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.72
CPEB4-208ENST00000520867 MT1BP07438 61 aa4.28□□□□□ -1.72
CPEB4-208ENST00000520867 MT1FP04733 61 aa4.25□□□□□ -1.73
CPEB4-208ENST00000520867 LCE2DQ5TA82 110 aaPredicted RBP4.24□□□□□ -1.73
CPEB4-208ENST00000520867 LCE2AQ5TA79 106 aaPredicted RBP4.23□□□□□ -1.73
CPEB4-208ENST00000520867 RNF213Q63HN8 5207 aa4.22□□□□□ -1.73
CPEB4-208ENST00000520867 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
CPEB4-208ENST00000520867 MT2AP02795 61 aa4.21□□□□□ -1.74
CPEB4-208ENST00000520867 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
CPEB4-208ENST00000520867 FAT4Q6V0I7 4981 aa4.16□□□□□ -1.74
CPEB4-208ENST00000520867 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
CPEB4-208ENST00000520867 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
CPEB4-208ENST00000520867 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
CPEB4-208ENST00000520867 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
CPEB4-208ENST00000520867 KMT2DO14686 5537 aa4.07□□□□□ -1.76
CPEB4-208ENST00000520867 MT1HP80294 61 aa4.06□□□□□ -1.76
CPEB4-208ENST00000520867 PRM1P04553 51 aa4.02□□□□□ -1.77
CPEB4-208ENST00000520867 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms