RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 KRTAP13-2Q52LG2 175 aa2.88□□□□□ -1.95
CLINT1-202ENST00000518855 MGAM2Q2M2H8 2515 aa2.87□□□□□ -1.95
CLINT1-202ENST00000518855 KRTAP1-4P0C5Y4 121 aa2.87□□□□□ -1.95
CLINT1-202ENST00000518855 STAB1Q9NY15 2570 aa2.86□□□□□ -1.95
CLINT1-202ENST00000518855 LY6G6CO95867 125 aa2.86□□□□□ -1.95
CLINT1-202ENST00000518855 LUZP6Q538Z0 58 aa2.86□□□□□ -1.95
CLINT1-202ENST00000518855 ANAPC11Q9NYG5 84 aa2.85□□□□□ -1.95
CLINT1-202ENST00000518855 COL6A5A8TX70 2615 aa2.84□□□□□ -1.95
CLINT1-202ENST00000518855 VPS13BQ7Z7G8 4022 aa2.84□□□□□ -1.96
CLINT1-202ENST00000518855 APOBP04114 4563 aaKnown RBP2.84□□□□□ -1.96
CLINT1-202ENST00000518855 A8MUU9 505 aa2.84□□□□□ -1.96
CLINT1-202ENST00000518855 CIRBP-AS1Q8TBR5 109 aa2.84□□□□□ -1.96
CLINT1-202ENST00000518855 SPINK1P00995 79 aa2.83□□□□□ -1.96
CLINT1-202ENST00000518855 LRP1BQ9NZR2 4599 aa2.83□□□□□ -1.96
CLINT1-202ENST00000518855 NOTCH1P46531 2555 aa2.83□□□□□ -1.96
CLINT1-202ENST00000518855 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
CLINT1-202ENST00000518855 SPINK6Q6UWN8 80 aa2.82□□□□□ -1.96
CLINT1-202ENST00000518855 C20orf166-AS1Q96NR2 134 aa2.82□□□□□ -1.96
CLINT1-202ENST00000518855 STAB2Q8WWQ8 2551 aa2.81□□□□□ -1.96
CLINT1-202ENST00000518855 H0YAA0 97 aa2.8□□□□□ -1.96
CLINT1-202ENST00000518855 MEGF8Q7Z7M0 2845 aa2.8□□□□□ -1.96
CLINT1-202ENST00000518855 HSPG2P98160 4391 aa2.79□□□□□ -1.96
CLINT1-202ENST00000518855 TNXBP22105 4242 aa2.79□□□□□ -1.96
CLINT1-202ENST00000518855 KRTAP25-1Q3LHN0 102 aa2.79□□□□□ -1.96
CLINT1-202ENST00000518855 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
CLINT1-202ENST00000518855 K7ERS5 55 aa2.77□□□□□ -1.97
CLINT1-202ENST00000518855 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
CLINT1-202ENST00000518855 LINC00304Q8N9R0 145 aa2.76□□□□□ -1.97
CLINT1-202ENST00000518855 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
CLINT1-202ENST00000518855 A0A1B0GU33 70 aa2.73□□□□□ -1.97
CLINT1-202ENST00000518855 TYMSOSQ8TAI1 123 aa2.73□□□□□ -1.97
CLINT1-202ENST00000518855 TGP01266 2768 aa2.73□□□□□ -1.97
CLINT1-202ENST00000518855 KRTAP10-4P60372 401 aaPredicted RBP2.72□□□□□ -1.97
CLINT1-202ENST00000518855 SPINT4Q6UDR6 99 aa2.72□□□□□ -1.97
CLINT1-202ENST00000518855 HYDINQ4G0P3 5121 aa2.72□□□□□ -1.97
CLINT1-202ENST00000518855 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.98
CLINT1-202ENST00000518855 DYNC1H1Q14204 4646 aaKnown RBP2.7□□□□□ -1.98
CLINT1-202ENST00000518855 FAT1Q14517 4588 aa2.7□□□□□ -1.98
CLINT1-202ENST00000518855 FAT3Q8TDW7 4589 aa2.69□□□□□ -1.98
CLINT1-202ENST00000518855 LRP1Q07954 4544 aaKnown RBP2.69□□□□□ -1.98
CLINT1-202ENST00000518855 KRTAP10-6P60371 365 aaPredicted RBP2.68□□□□□ -1.98
CLINT1-202ENST00000518855 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
CLINT1-202ENST00000518855 FLG2Q5D862 2391 aaPredicted RBP2.67□□□□□ -1.98
CLINT1-202ENST00000518855 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
CLINT1-202ENST00000518855 A0A1B0GVY2 172 aa2.65□□□□□ -1.99
CLINT1-202ENST00000518855 RPL37P61927 97 aaKnown RBP2.64□□□□□ -1.99
CLINT1-202ENST00000518855 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
CLINT1-202ENST00000518855 DNHD1Q96M86 4753 aa2.62□□□□□ -1.99
CLINT1-202ENST00000518855 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
CLINT1-202ENST00000518855 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
CLINT1-202ENST00000518855 KRTAP10-8P60410 259 aa2.59□□□□□ -2
CLINT1-202ENST00000518855 TPRXLQ17RH7 258 aa2.58□□□□□ -2
CLINT1-202ENST00000518855 MYCBP2O75592 4640 aa2.58□□□□□ -2
CLINT1-202ENST00000518855 C9orf92A6NGG3 77 aa2.58□□□□□ -2
CLINT1-202ENST00000518855 KRTAP10-7P60409 375 aaPredicted RBP2.58□□□□□ -2
CLINT1-202ENST00000518855 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
CLINT1-202ENST00000518855 CAMK2N1Q7Z7J9 78 aa2.57□□□□□ -2
CLINT1-202ENST00000518855 S4R3F8 94 aa2.57□□□□□ -2
CLINT1-202ENST00000518855 RYR2Q92736 4967 aa2.55□□□□□ -2
CLINT1-202ENST00000518855 M0QZ58 72 aa2.55□□□□□ -2
CLINT1-202ENST00000518855 KRTAP12-1P59990 96 aa2.54□□□□□ -2
CLINT1-202ENST00000518855 KRTAP12-2P59991 146 aa2.53□□□□□ -2
CLINT1-202ENST00000518855 BIRC6Q9NR09 4857 aa2.53□□□□□ -2.01
CLINT1-202ENST00000518855 SMR3BP02814 79 aaPredicted RBP2.47□□□□□ -2.01
CLINT1-202ENST00000518855 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
CLINT1-202ENST00000518855 MUC17Q685J3 4493 aa2.46□□□□□ -2.01
CLINT1-202ENST00000518855 RYR3Q15413 4870 aa2.46□□□□□ -2.02
CLINT1-202ENST00000518855 RYR1P21817 5038 aa2.46□□□□□ -2.02
CLINT1-202ENST00000518855 MT1HL1P0DM35 61 aa2.46□□□□□ -2.02
CLINT1-202ENST00000518855 FLGP20930 4061 aaPredicted RBP2.44□□□□□ -2.02
CLINT1-202ENST00000518855 PCLOQ9Y6V0 5065 aa2.44□□□□□ -2.02
CLINT1-202ENST00000518855 A0A0D9SG42 100 aa2.44□□□□□ -2.02
CLINT1-202ENST00000518855 KMT2CQ8NEZ4 4911 aaKnown RBP2.41□□□□□ -2.02
CLINT1-202ENST00000518855 LPAP08519 4548 aa2.41□□□□□ -2.02
CLINT1-202ENST00000518855 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
CLINT1-202ENST00000518855 Q5VSD8 79 aa2.4□□□□□ -2.02
CLINT1-202ENST00000518855 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
CLINT1-202ENST00000518855 HERC2O95714 4834 aa2.39□□□□□ -2.03
CLINT1-202ENST00000518855 R4GN34 69 aa2.39□□□□□ -2.03
CLINT1-202ENST00000518855 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
CLINT1-202ENST00000518855 PRO2289Q9P1D8 64 aa2.38□□□□□ -2.03
CLINT1-202ENST00000518855 DMBT1Q9UGM3 2413 aaPredicted RBP2.37□□□□□ -2.03
CLINT1-202ENST00000518855 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
CLINT1-202ENST00000518855 LRP2P98164 4655 aa2.35□□□□□ -2.03
CLINT1-202ENST00000518855 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
CLINT1-202ENST00000518855 HERC1Q15751 4861 aa2.35□□□□□ -2.03
CLINT1-202ENST00000518855 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
CLINT1-202ENST00000518855 MT3P25713 68 aa2.27□□□□□ -2.05
CLINT1-202ENST00000518855 KRTAP4-1Q9BYQ7 146 aa2.26□□□□□ -2.05
CLINT1-202ENST00000518855 KRTAP10-5P60370 271 aa2.25□□□□□ -2.05
CLINT1-202ENST00000518855 ABCA13Q86UQ4 5058 aa2.25□□□□□ -2.05
CLINT1-202ENST00000518855 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
CLINT1-202ENST00000518855 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
CLINT1-202ENST00000518855 KIAA1109Q2LD37 5005 aa2.22□□□□□ -2.05
CLINT1-202ENST00000518855 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
CLINT1-202ENST00000518855 TNP1P09430 55 aa2.21□□□□□ -2.06
CLINT1-202ENST00000518855 SPRR2GQ9BYE4 73 aa2.21□□□□□ -2.06
CLINT1-202ENST00000518855 INE1O15225 51 aa2.19□□□□□ -2.06
CLINT1-202ENST00000518855 EPPK1P58107 5090 aaKnown RBP2.18□□□□□ -2.06
CLINT1-202ENST00000518855 KRTAP9-6A8MVA2 160 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms