RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 RYR3Q15413 4870 aa5.45□□□□□ -1.54
MTCL1-207ENST00000518815 H1FX-AS1Q4G0G2 97 aa5.41□□□□□ -1.54
MTCL1-207ENST00000518815 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
MTCL1-207ENST00000518815 R4GN34 69 aa5.41□□□□□ -1.54
MTCL1-207ENST00000518815 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.55
MTCL1-207ENST00000518815 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
MTCL1-207ENST00000518815 RPL37P61927 97 aaKnown RBP5.39□□□□□ -1.55
MTCL1-207ENST00000518815 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
MTCL1-207ENST00000518815 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
MTCL1-207ENST00000518815 RYR1P21817 5038 aa5.36□□□□□ -1.55
MTCL1-207ENST00000518815 FAT1Q14517 4588 aa5.36□□□□□ -1.55
MTCL1-207ENST00000518815 HSPG2P98160 4391 aa5.35□□□□□ -1.55
MTCL1-207ENST00000518815 M0QZ58 72 aa5.33□□□□□ -1.56
MTCL1-207ENST00000518815 ROMO1P60602 79 aa5.32□□□□□ -1.56
MTCL1-207ENST00000518815 H0YAA0 97 aa5.31□□□□□ -1.56
MTCL1-207ENST00000518815 XP32Q5T750 250 aa5.31□□□□□ -1.56
MTCL1-207ENST00000518815 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
MTCL1-207ENST00000518815 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
MTCL1-207ENST00000518815 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
MTCL1-207ENST00000518815 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
MTCL1-207ENST00000518815 MT1HL1P0DM35 61 aa5.24□□□□□ -1.57
MTCL1-207ENST00000518815 KIAA1109Q2LD37 5005 aa5.23□□□□□ -1.57
MTCL1-207ENST00000518815 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
MTCL1-207ENST00000518815 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
MTCL1-207ENST00000518815 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
MTCL1-207ENST00000518815 TNXBP22105 4242 aa5.18□□□□□ -1.58
MTCL1-207ENST00000518815 TPRXLQ17RH7 258 aa5.17□□□□□ -1.58
MTCL1-207ENST00000518815 BIRC6Q9NR09 4857 aa5.16□□□□□ -1.58
MTCL1-207ENST00000518815 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
MTCL1-207ENST00000518815 LRP1Q07954 4544 aaKnown RBP5.13□□□□□ -1.59
MTCL1-207ENST00000518815 HERC2O95714 4834 aa5.1□□□□□ -1.59
MTCL1-207ENST00000518815 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
MTCL1-207ENST00000518815 P0C880 135 aa5.06□□□□□ -1.6
MTCL1-207ENST00000518815 MYCBP2O75592 4640 aa5.03□□□□□ -1.6
MTCL1-207ENST00000518815 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
MTCL1-207ENST00000518815 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
MTCL1-207ENST00000518815 ABCA13Q86UQ4 5058 aa4.97□□□□□ -1.61
MTCL1-207ENST00000518815 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.62
MTCL1-207ENST00000518815 KRTAP13-4Q3LI77 160 aa4.95□□□□□ -1.62
MTCL1-207ENST00000518815 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
MTCL1-207ENST00000518815 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
MTCL1-207ENST00000518815 TNP1P09430 55 aa4.84□□□□□ -1.64
MTCL1-207ENST00000518815 KRTAP12-1P59990 96 aa4.81□□□□□ -1.64
MTCL1-207ENST00000518815 PCLOQ9Y6V0 5065 aa4.8□□□□□ -1.64
MTCL1-207ENST00000518815 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
MTCL1-207ENST00000518815 LRP2P98164 4655 aa4.75□□□□□ -1.65
MTCL1-207ENST00000518815 LPAP08519 4548 aa4.74□□□□□ -1.65
MTCL1-207ENST00000518815 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
MTCL1-207ENST00000518815 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
MTCL1-207ENST00000518815 HERC1Q15751 4861 aa4.68□□□□□ -1.66
MTCL1-207ENST00000518815 KRTAP4-1Q9BYQ7 146 aa4.68□□□□□ -1.66
MTCL1-207ENST00000518815 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
MTCL1-207ENST00000518815 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
MTCL1-207ENST00000518815 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
MTCL1-207ENST00000518815 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
MTCL1-207ENST00000518815 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
MTCL1-207ENST00000518815 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
MTCL1-207ENST00000518815 FLGP20930 4061 aaPredicted RBP4.45□□□□□ -1.7
MTCL1-207ENST00000518815 MUC2Q02817 5179 aa4.44□□□□□ -1.7
MTCL1-207ENST00000518815 MT1HP80294 61 aa4.4□□□□□ -1.7
MTCL1-207ENST00000518815 RNF213Q63HN8 5207 aa4.4□□□□□ -1.7
MTCL1-207ENST00000518815 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
MTCL1-207ENST00000518815 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
MTCL1-207ENST00000518815 SPRR2GQ9BYE4 73 aa4.31□□□□□ -1.72
MTCL1-207ENST00000518815 FAT4Q6V0I7 4981 aa4.29□□□□□ -1.72
MTCL1-207ENST00000518815 KRTAP9-8Q9BYQ0 159 aa4.24□□□□□ -1.73
MTCL1-207ENST00000518815 MT2AP02795 61 aa4.24□□□□□ -1.73
MTCL1-207ENST00000518815 LCE2AQ5TA79 106 aaPredicted RBP4.23□□□□□ -1.73
MTCL1-207ENST00000518815 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
MTCL1-207ENST00000518815 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
MTCL1-207ENST00000518815 MT1FP04733 61 aa4.19□□□□□ -1.74
MTCL1-207ENST00000518815 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
MTCL1-207ENST00000518815 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
MTCL1-207ENST00000518815 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
MTCL1-207ENST00000518815 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
MTCL1-207ENST00000518815 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
MTCL1-207ENST00000518815 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
MTCL1-207ENST00000518815 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
MTCL1-207ENST00000518815 CRCT1Q9UGL9 99 aa4□□□□□ -1.77
MTCL1-207ENST00000518815 MT1BP07438 61 aa4□□□□□ -1.77
MTCL1-207ENST00000518815 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
MTCL1-207ENST00000518815 MT1XP80297 61 aa3.96□□□□□ -1.78
MTCL1-207ENST00000518815 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
MTCL1-207ENST00000518815 LCE2BO14633 110 aa3.94□□□□□ -1.78
MTCL1-207ENST00000518815 INE1O15225 51 aa3.93□□□□□ -1.78
MTCL1-207ENST00000518815 LCE2DQ5TA82 110 aaPredicted RBP3.9□□□□□ -1.79
MTCL1-207ENST00000518815 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
MTCL1-207ENST00000518815 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
MTCL1-207ENST00000518815 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
MTCL1-207ENST00000518815 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.81
MTCL1-207ENST00000518815 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
MTCL1-207ENST00000518815 USH2AO75445 5202 aa3.73□□□□□ -1.81
MTCL1-207ENST00000518815 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
MTCL1-207ENST00000518815 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
MTCL1-207ENST00000518815 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
MTCL1-207ENST00000518815 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
MTCL1-207ENST00000518815 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
MTCL1-207ENST00000518815 SSPOA2VEC9 5147 aa3.65□□□□□ -1.83
MTCL1-207ENST00000518815 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
MTCL1-207ENST00000518815 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms