RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
PCM1-204ENST00000517730 PKHD1L1Q86WI1 4243 aa7.81□□□□□ -1.16
PCM1-204ENST00000517730 PKHD1P08F94 4074 aa7.79□□□□□ -1.16
PCM1-204ENST00000517730 KRTAP10-4P60372 401 aaPredicted RBP7.78□□□□□ -1.16
PCM1-204ENST00000517730 S4R3F8 94 aa7.77□□□□□ -1.17
PCM1-204ENST00000517730 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
PCM1-204ENST00000517730 KRTAP15-1Q3LI76 137 aa7.7□□□□□ -1.18
PCM1-204ENST00000517730 FAT1Q14517 4588 aa7.67□□□□□ -1.18
PCM1-204ENST00000517730 APOBP04114 4563 aaKnown RBP7.65□□□□□ -1.18
PCM1-204ENST00000517730 KRTAP12-2P59991 146 aa7.64□□□□□ -1.19
PCM1-204ENST00000517730 KRTAP10-8P60410 259 aa7.62□□□□□ -1.19
PCM1-204ENST00000517730 NDUFAF8A1L188 74 aa7.62□□□□□ -1.19
PCM1-204ENST00000517730 A0A1B0GVY2 172 aa7.6□□□□□ -1.19
PCM1-204ENST00000517730 KRTAP12-1P59990 96 aa7.59□□□□□ -1.19
PCM1-204ENST00000517730 DYNC1H1Q14204 4646 aaKnown RBP7.57□□□□□ -1.2
PCM1-204ENST00000517730 XP32Q5T750 250 aa7.57□□□□□ -1.2
PCM1-204ENST00000517730 M0QZ58 72 aa7.53□□□□□ -1.2
PCM1-204ENST00000517730 HSPG2P98160 4391 aa7.53□□□□□ -1.2
PCM1-204ENST00000517730 MYCBP2O75592 4640 aa7.51□□□□□ -1.21
PCM1-204ENST00000517730 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
PCM1-204ENST00000517730 LRP1Q07954 4544 aaKnown RBP7.45□□□□□ -1.22
PCM1-204ENST00000517730 RYR2Q92736 4967 aa7.41□□□□□ -1.22
PCM1-204ENST00000517730 TNXBP22105 4242 aa7.41□□□□□ -1.22
PCM1-204ENST00000517730 LPAP08519 4548 aa7.37□□□□□ -1.23
PCM1-204ENST00000517730 KMT2CQ8NEZ4 4911 aaKnown RBP7.37□□□□□ -1.23
PCM1-204ENST00000517730 Q5VSD8 79 aa7.3□□□□□ -1.24
PCM1-204ENST00000517730 RYR3Q15413 4870 aa7.23□□□□□ -1.25
PCM1-204ENST00000517730 R4GN34 69 aa7.22□□□□□ -1.25
PCM1-204ENST00000517730 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
PCM1-204ENST00000517730 MT1HL1P0DM35 61 aa7.15□□□□□ -1.26
PCM1-204ENST00000517730 LRP2P98164 4655 aa7.11□□□□□ -1.27
PCM1-204ENST00000517730 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
PCM1-204ENST00000517730 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
PCM1-204ENST00000517730 A0A0A0MQY5 61 aa7.02□□□□□ -1.29
PCM1-204ENST00000517730 LUZP6Q538Z0 58 aa7□□□□□ -1.29
PCM1-204ENST00000517730 EPPK1P58107 5090 aaKnown RBP6.99□□□□□ -1.29
PCM1-204ENST00000517730 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
PCM1-204ENST00000517730 RYR1P21817 5038 aa6.96□□□□□ -1.3
PCM1-204ENST00000517730 KIAA1109Q2LD37 5005 aa6.95□□□□□ -1.3
PCM1-204ENST00000517730 J3QL48 77 aa6.91□□□□□ -1.3
PCM1-204ENST00000517730 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
PCM1-204ENST00000517730 CAMK2N1Q7Z7J9 78 aa6.9□□□□□ -1.3
PCM1-204ENST00000517730 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
PCM1-204ENST00000517730 ABCA13Q86UQ4 5058 aa6.81□□□□□ -1.32
PCM1-204ENST00000517730 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
PCM1-204ENST00000517730 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
PCM1-204ENST00000517730 TNP1P09430 55 aa6.72□□□□□ -1.33
PCM1-204ENST00000517730 BIRC6Q9NR09 4857 aa6.71□□□□□ -1.34
PCM1-204ENST00000517730 MUC17Q685J3 4493 aa6.71□□□□□ -1.34
PCM1-204ENST00000517730 KRTAP19-2Q3LHN2 52 aa6.7□□□□□ -1.34
PCM1-204ENST00000517730 SPRR5A0A1B0GTR4 108 aa6.69□□□□□ -1.34
PCM1-204ENST00000517730 HERC2O95714 4834 aa6.63□□□□□ -1.35
PCM1-204ENST00000517730 MUC2Q02817 5179 aa6.57□□□□□ -1.36
PCM1-204ENST00000517730 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
PCM1-204ENST00000517730 PCLOQ9Y6V0 5065 aa6.42□□□□□ -1.38
PCM1-204ENST00000517730 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
PCM1-204ENST00000517730 HERC1Q15751 4861 aa6.35□□□□□ -1.39
PCM1-204ENST00000517730 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
PCM1-204ENST00000517730 PRO2289Q9P1D8 64 aa6.28□□□□□ -1.4
PCM1-204ENST00000517730 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
PCM1-204ENST00000517730 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
PCM1-204ENST00000517730 FAT4Q6V0I7 4981 aa6.22□□□□□ -1.41
PCM1-204ENST00000517730 INE1O15225 51 aa6.21□□□□□ -1.42
PCM1-204ENST00000517730 KRTAP8-1Q8IUC2 63 aa6.16□□□□□ -1.42
PCM1-204ENST00000517730 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
PCM1-204ENST00000517730 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
PCM1-204ENST00000517730 M0R2T5 61 aa6.03□□□□□ -1.44
PCM1-204ENST00000517730 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
PCM1-204ENST00000517730 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
PCM1-204ENST00000517730 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
PCM1-204ENST00000517730 MT2AP02795 61 aa5.96□□□□□ -1.46
PCM1-204ENST00000517730 MT1FP04733 61 aa5.96□□□□□ -1.46
PCM1-204ENST00000517730 MT1HP80294 61 aa5.95□□□□□ -1.46
PCM1-204ENST00000517730 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
PCM1-204ENST00000517730 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
PCM1-204ENST00000517730 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
PCM1-204ENST00000517730 MT1XP80297 61 aa5.9□□□□□ -1.47
PCM1-204ENST00000517730 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
PCM1-204ENST00000517730 MT1BP07438 61 aa5.86□□□□□ -1.47
PCM1-204ENST00000517730 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
PCM1-204ENST00000517730 LCE2BO14633 110 aa5.75□□□□□ -1.49
PCM1-204ENST00000517730 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
PCM1-204ENST00000517730 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
PCM1-204ENST00000517730 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
PCM1-204ENST00000517730 KMT2DO14686 5537 aa5.61□□□□□ -1.51
PCM1-204ENST00000517730 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
PCM1-204ENST00000517730 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
PCM1-204ENST00000517730 USH2AO75445 5202 aa5.46□□□□□ -1.53
PCM1-204ENST00000517730 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
PCM1-204ENST00000517730 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
PCM1-204ENST00000517730 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
PCM1-204ENST00000517730 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
PCM1-204ENST00000517730 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
PCM1-204ENST00000517730 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
PCM1-204ENST00000517730 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
PCM1-204ENST00000517730 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
PCM1-204ENST00000517730 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
PCM1-204ENST00000517730 MT1LQ93083 61 aa5.14□□□□□ -1.59
PCM1-204ENST00000517730 MT1EP04732 61 aa5.08□□□□□ -1.6
PCM1-204ENST00000517730 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms