RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 PREX2Q70Z35 1606 aa-0.18□□□□□ -2.44
RN7SKP88-201ENST00000516847 USH2AO75445 5202 aa-0.18□□□□□ -2.44
RN7SKP88-201ENST00000516847 DNAH8Q96JB1 4490 aa-0.18□□□□□ -2.44
RN7SKP88-201ENST00000516847 SYCP2Q9BX26 1530 aa-0.18□□□□□ -2.44
RN7SKP88-201ENST00000516847 CHD7Q9P2D1 2997 aa-0.18□□□□□ -2.44
RN7SKP88-201ENST00000516847 KIF21BO75037 1637 aa-0.19□□□□□ -2.44
RN7SKP88-201ENST00000516847 M0QY20 66 aa-0.19□□□□□ -2.44
RN7SKP88-201ENST00000516847 KRTAP19-5Q3LI72 72 aa-0.19□□□□□ -2.44
RN7SKP88-201ENST00000516847 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
RN7SKP88-201ENST00000516847 EFCAB6Q5THR3 1501 aa-0.19□□□□□ -2.44
RN7SKP88-201ENST00000516847 ABCA5Q8WWZ7 1642 aa-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 DSTQ03001 7570 aaKnown RBP-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 TLN2Q9Y4G6 2542 aa-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 LMO7Q8WWI1 1683 aa-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 FAM208AQ9UK61 1670 aaKnown RBP-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 USP9XQ93008 2570 aaPredicted RBP-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 MT1HP80294 61 aa-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 KRTAP8-1Q8IUC2 63 aa-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 CMC2Q9NRP2 79 aa-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 COL6A5A8TX70 2615 aa-0.2□□□□□ -2.44
RN7SKP88-201ENST00000516847 MROH2AA6NES4 1674 aa-0.21□□□□□ -2.44
RN7SKP88-201ENST00000516847 DNAH7Q8WXX0 4024 aa-0.21□□□□□ -2.44
RN7SKP88-201ENST00000516847 ADGRG4Q8IZF6 3080 aa-0.21□□□□□ -2.44
RN7SKP88-201ENST00000516847 CLPSL2Q6UWE3 100 aa-0.21□□□□□ -2.44
RN7SKP88-201ENST00000516847 KAAG1Q9UBP8 84 aa-0.21□□□□□ -2.44
RN7SKP88-201ENST00000516847 ABCC8Q09428 1581 aa-0.21□□□□□ -2.44
RN7SKP88-201ENST00000516847 NRXN3Q9Y4C0 1643 aa-0.21□□□□□ -2.44
RN7SKP88-201ENST00000516847 FANCD2Q9BXW9 1451 aa-0.22□□□□□ -2.44
RN7SKP88-201ENST00000516847 C5orf42Q9H799 3197 aa-0.22□□□□□ -2.44
RN7SKP88-201ENST00000516847 CMYA5Q8N3K9 4069 aa-0.22□□□□□ -2.44
RN7SKP88-201ENST00000516847 LINC01546A6NGU7 62 aa-0.22□□□□□ -2.44
RN7SKP88-201ENST00000516847 DEFB131AP59861 70 aa-0.22□□□□□ -2.44
RN7SKP88-201ENST00000516847 WFDC10BQ8IUB3 73 aa-0.22□□□□□ -2.44
RN7SKP88-201ENST00000516847 EPPK1P58107 5090 aaKnown RBP-0.22□□□□□ -2.44
RN7SKP88-201ENST00000516847 SRCAPQ6ZRS2 3230 aa-0.22□□□□□ -2.44
RN7SKP88-201ENST00000516847 USP9YO00507 2555 aaPredicted RBP-0.22□□□□□ -2.45
RN7SKP88-201ENST00000516847 HERC2O95714 4834 aa-0.23□□□□□ -2.45
RN7SKP88-201ENST00000516847 SMR3BP02814 79 aaPredicted RBP-0.23□□□□□ -2.45
RN7SKP88-201ENST00000516847 MT4P47944 62 aa-0.23□□□□□ -2.45
RN7SKP88-201ENST00000516847 DEFB1P60022 68 aa-0.23□□□□□ -2.45
RN7SKP88-201ENST00000516847 RYR1P21817 5038 aa-0.23□□□□□ -2.45
RN7SKP88-201ENST00000516847 PLECQ15149 4684 aaKnown RBP-0.23□□□□□ -2.45
RN7SKP88-201ENST00000516847 TEX15Q9BXT5 2789 aa-0.23□□□□□ -2.45
RN7SKP88-201ENST00000516847 LRBAP50851 2863 aa-0.24□□□□□ -2.45
RN7SKP88-201ENST00000516847 KRTAP20-2Q3LI61 65 aa-0.24□□□□□ -2.45
RN7SKP88-201ENST00000516847 MGAQ8IWI9 3026 aa-0.24□□□□□ -2.45
RN7SKP88-201ENST00000516847 DDX60Q8IY21 1712 aaKnown RBP-0.24□□□□□ -2.45
RN7SKP88-201ENST00000516847 SMIM2Q9BVW6 85 aa-0.25□□□□□ -2.45
RN7SKP88-201ENST00000516847 LAMA3Q16787 3333 aa-0.25□□□□□ -2.45
RN7SKP88-201ENST00000516847 IQGAP1P46940 1657 aa-0.26□□□□□ -2.45
RN7SKP88-201ENST00000516847 TRPM2O94759 1503 aa-0.26□□□□□ -2.45
RN7SKP88-201ENST00000516847 SNRPGP15A8MWD9 76 aa-0.26□□□□□ -2.45
RN7SKP88-201ENST00000516847 TFF3Q07654 80 aa-0.26□□□□□ -2.45
RN7SKP88-201ENST00000516847 CSMD1Q96PZ7 3565 aa-0.26□□□□□ -2.45
RN7SKP88-201ENST00000516847 LAMA2P24043 3122 aaKnown RBP-0.26□□□□□ -2.45
RN7SKP88-201ENST00000516847 BIRC6Q9NR09 4857 aa-0.26□□□□□ -2.45
RN7SKP88-201ENST00000516847 MT1EP04732 61 aa-0.27□□□□□ -2.45
RN7SKP88-201ENST00000516847 DNHD1Q96M86 4753 aa-0.27□□□□□ -2.45
RN7SKP88-201ENST00000516847 DNAH10Q8IVF4 4471 aa-0.28□□□□□ -2.45
RN7SKP88-201ENST00000516847 ZFHX4Q86UP3 3567 aa-0.28□□□□□ -2.45
RN7SKP88-201ENST00000516847 SPART-AS1P0CW21 52 aa-0.28□□□□□ -2.45
RN7SKP88-201ENST00000516847 RNF213Q63HN8 5207 aa-0.28□□□□□ -2.45
RN7SKP88-201ENST00000516847 EYSQ5T1H1 3165 aa-0.28□□□□□ -2.45
RN7SKP88-201ENST00000516847 DYNC1H1Q14204 4646 aaKnown RBP-0.28□□□□□ -2.45
RN7SKP88-201ENST00000516847 DMXL2Q8TDJ6 3036 aa-0.28□□□□□ -2.45
RN7SKP88-201ENST00000516847 SPTAN1Q13813 2472 aaKnown RBP-0.28□□□□□ -2.45
RN7SKP88-201ENST00000516847 MT1XP80297 61 aa-0.29□□□□□ -2.46
RN7SKP88-201ENST00000516847 CLTCL1P53675 1640 aa-0.29□□□□□ -2.46
RN7SKP88-201ENST00000516847 DNAH17Q9UFH2 4485 aa-0.29□□□□□ -2.46
RN7SKP88-201ENST00000516847 CRYBG3Q68DQ2 2970 aa-0.29□□□□□ -2.46
RN7SKP88-201ENST00000516847 NFAT5O94916 1531 aa-0.29□□□□□ -2.46
RN7SKP88-201ENST00000516847 NIPBLQ6KC79 2804 aaeCLIP-0.3□□□□□ -2.46
RN7SKP88-201ENST00000516847 CFAP46Q8IYW2 2715 aa-0.3□□□□□ -2.46
RN7SKP88-201ENST00000516847 NDUFA1O15239 70 aa-0.3□□□□□ -2.46
RN7SKP88-201ENST00000516847 TRRAPQ9Y4A5 3859 aa-0.31□□□□□ -2.46
RN7SKP88-201ENST00000516847 POLR2KP53803 58 aaKnown RBP-0.31□□□□□ -2.46
RN7SKP88-201ENST00000516847 MT1LQ93083 61 aa-0.31□□□□□ -2.46
RN7SKP88-201ENST00000516847 MYO9AB2RTY4 2548 aa-0.32□□□□□ -2.46
RN7SKP88-201ENST00000516847 CFAP54Q96N23 3096 aa-0.32□□□□□ -2.46
RN7SKP88-201ENST00000516847 PRUNE2Q8WUY3 3088 aa-0.33□□□□□ -2.46
RN7SKP88-201ENST00000516847 IQGAP2Q13576 1575 aa-0.33□□□□□ -2.46
RN7SKP88-201ENST00000516847 DOPEY1Q5JWR5 2465 aa-0.34□□□□□ -2.46
RN7SKP88-201ENST00000516847 CSMD2Q7Z408 3487 aa-0.34□□□□□ -2.46
RN7SKP88-201ENST00000516847 HYDINQ4G0P3 5121 aa-0.35□□□□□ -2.47
RN7SKP88-201ENST00000516847 RYR2Q92736 4967 aa-0.35□□□□□ -2.47
RN7SKP88-201ENST00000516847 SMG1Q96Q15 3661 aaKnown RBP-0.35□□□□□ -2.47
RN7SKP88-201ENST00000516847 ITPR2Q14571 2701 aa-0.35□□□□□ -2.47
RN7SKP88-201ENST00000516847 FRYLO94915 3013 aa-0.35□□□□□ -2.47
RN7SKP88-201ENST00000516847 TOMM5Q8N4H5 51 aa-0.36□□□□□ -2.47
RN7SKP88-201ENST00000516847 LEAP2Q969E1 77 aa-0.36□□□□□ -2.47
RN7SKP88-201ENST00000516847 CEP295Q9C0D2 2601 aa-0.36□□□□□ -2.47
RN7SKP88-201ENST00000516847 DNAH5Q8TE73 4624 aa-0.37□□□□□ -2.47
RN7SKP88-201ENST00000516847 MT1HL1P0DM35 61 aa-0.37□□□□□ -2.47
RN7SKP88-201ENST00000516847 KIAA1109Q2LD37 5005 aa-0.37□□□□□ -2.47
RN7SKP88-201ENST00000516847 ATP7AQ04656 1500 aa-0.38□□□□□ -2.47
RN7SKP88-201ENST00000516847 RYR3Q15413 4870 aa-0.38□□□□□ -2.47
RN7SKP88-201ENST00000516847 DEFB136Q30KP8 78 aa-0.38□□□□□ -2.47
RN7SKP88-201ENST00000516847 ATMQ13315 3056 aa-0.38□□□□□ -2.47
RN7SKP88-201ENST00000516847 VPS13CQ709C8 3753 aa-0.38□□□□□ -2.47
RN7SKP88-201ENST00000516847 SAMD9LQ8IVG5 1584 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms