RNA–Protein interactions for RNA: ENST00000516817.1

RNU6-1308P-201, Transcript of RNA, U6 small nuclear 1308, pseudogene, humanhuman

BASIC

Gene RNU6-1308P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1308P-201ENST00000516817 SMIM2Q9BVW6 85 aa-0.6□□□□□ -2.51
RNU6-1308P-201ENST00000516817 RANBP2P49792 3224 aaKnown RBP-0.6□□□□□ -2.51
RNU6-1308P-201ENST00000516817 KRTAP19-5Q3LI72 72 aa-0.61□□□□□ -2.51
RNU6-1308P-201ENST00000516817 ITPR3Q14573 2671 aa-0.61□□□□□ -2.51
RNU6-1308P-201ENST00000516817 DNAH2Q9P225 4427 aa-0.62□□□□□ -2.51
RNU6-1308P-201ENST00000516817 NRXN3Q9Y4C0 1643 aa-0.62□□□□□ -2.51
RNU6-1308P-201ENST00000516817 LINC01546A6NGU7 62 aa-0.62□□□□□ -2.51
RNU6-1308P-201ENST00000516817 SNRPGP15A8MWD9 76 aa-0.62□□□□□ -2.51
RNU6-1308P-201ENST00000516817 KRTAP8-1Q8IUC2 63 aa-0.62□□□□□ -2.51
RNU6-1308P-201ENST00000516817 USP9XQ93008 2570 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-1308P-201ENST00000516817 DEFB1P60022 68 aa-0.63□□□□□ -2.51
RNU6-1308P-201ENST00000516817 TFF3Q07654 80 aa-0.63□□□□□ -2.51
RNU6-1308P-201ENST00000516817 TRIOO75962 3097 aa-0.65□□□□□ -2.51
RNU6-1308P-201ENST00000516817 DNAH1Q9P2D7 4330 aa-0.65□□□□□ -2.51
RNU6-1308P-201ENST00000516817 STARD9Q9P2P6 4700 aa-0.66□□□□□ -2.51
RNU6-1308P-201ENST00000516817 MT1HP80294 61 aa-0.66□□□□□ -2.52
RNU6-1308P-201ENST00000516817 COL6A5A8TX70 2615 aa-0.67□□□□□ -2.52
RNU6-1308P-201ENST00000516817 COL12A1Q99715 3063 aa-0.67□□□□□ -2.52
RNU6-1308P-201ENST00000516817 A0A0C4DFX4 3053 aa-0.68□□□□□ -2.52
RNU6-1308P-201ENST00000516817 MUC17Q685J3 4493 aa-0.68□□□□□ -2.52
RNU6-1308P-201ENST00000516817 HERC1Q15751 4861 aa-0.69□□□□□ -2.52
RNU6-1308P-201ENST00000516817 SMR3BP02814 79 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1308P-201ENST00000516817 USP9YO00507 2555 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1308P-201ENST00000516817 FAT1Q14517 4588 aa-0.72□□□□□ -2.52
RNU6-1308P-201ENST00000516817 DDX60Q8IY21 1712 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1308P-201ENST00000516817 DNAH8Q96JB1 4490 aa-0.72□□□□□ -2.52
RNU6-1308P-201ENST00000516817 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.72□□□□□ -2.53
RNU6-1308P-201ENST00000516817 SPART-AS1P0CW21 52 aa-0.73□□□□□ -2.53
RNU6-1308P-201ENST00000516817 TRPM2O94759 1503 aa-0.74□□□□□ -2.53
RNU6-1308P-201ENST00000516817 MT4P47944 62 aa-0.75□□□□□ -2.53
RNU6-1308P-201ENST00000516817 KRTAP20-2Q3LI61 65 aa-0.75□□□□□ -2.53
RNU6-1308P-201ENST00000516817 IQGAP1P46940 1657 aa-0.75□□□□□ -2.53
RNU6-1308P-201ENST00000516817 UBR4Q5T4S7 5183 aa-0.76□□□□□ -2.53
RNU6-1308P-201ENST00000516817 ITPR1Q14643 2758 aa-0.77□□□□□ -2.53
RNU6-1308P-201ENST00000516817 SPENQ96T58 3664 aaKnown RBP-0.78□□□□□ -2.53
RNU6-1308P-201ENST00000516817 CELSR3Q9NYQ7 3312 aa-0.78□□□□□ -2.53
RNU6-1308P-201ENST00000516817 FRYQ5TBA9 3013 aa-0.81□□□□□ -2.54
RNU6-1308P-201ENST00000516817 POLR2KP53803 58 aaKnown RBP-0.81□□□□□ -2.54
RNU6-1308P-201ENST00000516817 NEBP20929 6669 aa-0.82□□□□□ -2.54
RNU6-1308P-201ENST00000516817 NDUFA1O15239 70 aa-0.83□□□□□ -2.54
RNU6-1308P-201ENST00000516817 SPTBN5Q9NRC6 3674 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1308P-201ENST00000516817 SPTAN1Q13813 2472 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1308P-201ENST00000516817 NFAT5O94916 1531 aa-0.84□□□□□ -2.54
RNU6-1308P-201ENST00000516817 RELNP78509 3460 aa-0.85□□□□□ -2.55
RNU6-1308P-201ENST00000516817 CLTCL1P53675 1640 aa-0.86□□□□□ -2.55
RNU6-1308P-201ENST00000516817 USH2AO75445 5202 aa-0.88□□□□□ -2.55
RNU6-1308P-201ENST00000516817 C5orf42Q9H799 3197 aa-0.88□□□□□ -2.55
RNU6-1308P-201ENST00000516817 DNAH7Q8WXX0 4024 aa-0.91□□□□□ -2.55
RNU6-1308P-201ENST00000516817 TEX15Q9BXT5 2789 aa-0.91□□□□□ -2.56
RNU6-1308P-201ENST00000516817 PLECQ15149 4684 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1308P-201ENST00000516817 MT1EP04732 61 aa-0.92□□□□□ -2.56
RNU6-1308P-201ENST00000516817 TOMM5Q8N4H5 51 aa-0.94□□□□□ -2.56
RNU6-1308P-201ENST00000516817 CHD7Q9P2D1 2997 aa-0.95□□□□□ -2.56
RNU6-1308P-201ENST00000516817 ADGRG4Q8IZF6 3080 aa-0.97□□□□□ -2.56
RNU6-1308P-201ENST00000516817 HERC2O95714 4834 aa-0.97□□□□□ -2.56
RNU6-1308P-201ENST00000516817 MT1XP80297 61 aa-0.97□□□□□ -2.56
RNU6-1308P-201ENST00000516817 LRBAP50851 2863 aa-0.97□□□□□ -2.56
RNU6-1308P-201ENST00000516817 IQGAP2Q13576 1575 aa-0.97□□□□□ -2.56
RNU6-1308P-201ENST00000516817 CMYA5Q8N3K9 4069 aa-0.99□□□□□ -2.57
RNU6-1308P-201ENST00000516817 RYR1P21817 5038 aa-0.99□□□□□ -2.57
RNU6-1308P-201ENST00000516817 MYO9AB2RTY4 2548 aa-1□□□□□ -2.57
RNU6-1308P-201ENST00000516817 DOPEY1Q5JWR5 2465 aa-1.01□□□□□ -2.57
RNU6-1308P-201ENST00000516817 MT1LQ93083 61 aa-1.02□□□□□ -2.57
RNU6-1308P-201ENST00000516817 MGAQ8IWI9 3026 aa-1.05□□□□□ -2.58
RNU6-1308P-201ENST00000516817 SRCAPQ6ZRS2 3230 aa-1.06□□□□□ -2.58
RNU6-1308P-201ENST00000516817 EPPK1P58107 5090 aaKnown RBP-1.06□□□□□ -2.58
RNU6-1308P-201ENST00000516817 LAMA3Q16787 3333 aa-1.07□□□□□ -2.58
RNU6-1308P-201ENST00000516817 LEAP2Q969E1 77 aa-1.07□□□□□ -2.58
RNU6-1308P-201ENST00000516817 DNAH17Q9UFH2 4485 aa-1.09□□□□□ -2.58
RNU6-1308P-201ENST00000516817 DNAH10Q8IVF4 4471 aa-1.1□□□□□ -2.59
RNU6-1308P-201ENST00000516817 DYNC1H1Q14204 4646 aaKnown RBP-1.1□□□□□ -2.59
RNU6-1308P-201ENST00000516817 RYR3Q15413 4870 aa-1.1□□□□□ -2.59
RNU6-1308P-201ENST00000516817 CSMD1Q96PZ7 3565 aa-1.11□□□□□ -2.59
RNU6-1308P-201ENST00000516817 NIPBLQ6KC79 2804 aaeCLIP-1.12□□□□□ -2.59
RNU6-1308P-201ENST00000516817 CFAP46Q8IYW2 2715 aa-1.14□□□□□ -2.59
RNU6-1308P-201ENST00000516817 DNHD1Q96M86 4753 aa-1.15□□□□□ -2.59
RNU6-1308P-201ENST00000516817 LAMA2P24043 3122 aaKnown RBP-1.15□□□□□ -2.59
RNU6-1308P-201ENST00000516817 ATP7AQ04656 1500 aa-1.16□□□□□ -2.6
RNU6-1308P-201ENST00000516817 HYDINQ4G0P3 5121 aa-1.18□□□□□ -2.6
RNU6-1308P-201ENST00000516817 DEFB136Q30KP8 78 aa-1.18□□□□□ -2.6
RNU6-1308P-201ENST00000516817 TRRAPQ9Y4A5 3859 aa-1.2□□□□□ -2.6
RNU6-1308P-201ENST00000516817 CRYBG3Q68DQ2 2970 aa-1.2□□□□□ -2.6
RNU6-1308P-201ENST00000516817 ZFHX4Q86UP3 3567 aa-1.21□□□□□ -2.6
RNU6-1308P-201ENST00000516817 SAMD9LQ8IVG5 1584 aa-1.21□□□□□ -2.6
RNU6-1308P-201ENST00000516817 BIRC6Q9NR09 4857 aa-1.22□□□□□ -2.6
RNU6-1308P-201ENST00000516817 MT1HL1P0DM35 61 aa-1.24□□□□□ -2.61
RNU6-1308P-201ENST00000516817 TOMM7Q9P0U1 55 aa-1.24□□□□□ -2.61
RNU6-1308P-201ENST00000516817 KIAA1109Q2LD37 5005 aa-1.28□□□□□ -2.61
RNU6-1308P-201ENST00000516817 CEP295Q9C0D2 2601 aa-1.28□□□□□ -2.61
RNU6-1308P-201ENST00000516817 DMXL2Q8TDJ6 3036 aa-1.31□□□□□ -2.62
RNU6-1308P-201ENST00000516817 ITPR2Q14571 2701 aa-1.31□□□□□ -2.62
RNU6-1308P-201ENST00000516817 EYSQ5T1H1 3165 aa-1.32□□□□□ -2.62
RNU6-1308P-201ENST00000516817 DEFB4AO15263 64 aa-1.33□□□□□ -2.62
RNU6-1308P-201ENST00000516817 TLN1Q9Y490 2541 aaKnown RBP-1.33□□□□□ -2.62
RNU6-1308P-201ENST00000516817 RNF213Q63HN8 5207 aa-1.34□□□□□ -2.62
RNU6-1308P-201ENST00000516817 LINC01590Q5TEZ4 76 aa-1.34□□□□□ -2.62
RNU6-1308P-201ENST00000516817 RPL39P62891 51 aaKnown RBP-1.35□□□□□ -2.63
RNU6-1308P-201ENST00000516817 MT1GP13640 62 aa-1.36□□□□□ -2.63
RNU6-1308P-201ENST00000516817 TOP2AP11388 1531 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1308P-201ENST00000516817 MT1MQ8N339 61 aa-1.39□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms