RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 DLEU1O43261 78 aa-0.96□□□□□ -2.56
RNU4-49P-201ENST00000516080 HMGA1P17096 107 aaKnown RBP-0.96□□□□□ -2.56
RNU4-49P-201ENST00000516080 CRIP1P50238 77 aa-0.96□□□□□ -2.56
RNU4-49P-201ENST00000516080 S100A10P60903 97 aa-0.96□□□□□ -2.56
RNU4-49P-201ENST00000516080 TTTY10Q9BZA0 68 aa-0.96□□□□□ -2.56
RNU4-49P-201ENST00000516080 KAAG1Q9UBP8 84 aa-0.96□□□□□ -2.56
RNU4-49P-201ENST00000516080 GNG8Q9UK08 70 aa-0.96□□□□□ -2.56
RNU4-49P-201ENST00000516080 CENPEQ02224 2701 aa-0.97□□□□□ -2.56
RNU4-49P-201ENST00000516080 A0A1B0GV90 55 aa-0.97□□□□□ -2.56
RNU4-49P-201ENST00000516080 CORTO00230 105 aa-0.97□□□□□ -2.56
RNU4-49P-201ENST00000516080 KCNQ1DNQ9H478 68 aa-0.97□□□□□ -2.56
RNU4-49P-201ENST00000516080 WDFY4Q6ZS81 3184 aa-0.97□□□□□ -2.57
RNU4-49P-201ENST00000516080 ASXL1Q8IXJ9 1541 aa-0.98□□□□□ -2.57
RNU4-49P-201ENST00000516080 TIAM1Q13009 1591 aa-0.98□□□□□ -2.57
RNU4-49P-201ENST00000516080 ETDCA0A1B0GVM5 59 aa-0.98□□□□□ -2.57
RNU4-49P-201ENST00000516080 RABAC1Q9UI14 185 aa-0.98□□□□□ -2.57
RNU4-49P-201ENST00000516080 DDX60Q8IY21 1712 aaKnown RBP-0.98□□□□□ -2.57
RNU4-49P-201ENST00000516080 EEA1Q15075 1411 aa-0.98□□□□□ -2.57
RNU4-49P-201ENST00000516080 CEP162Q5TB80 1403 aa-0.98□□□□□ -2.57
RNU4-49P-201ENST00000516080 ABCC6O95255 1503 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 LMTK2Q8IWU2 1503 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 NRXN3Q9Y4C0 1643 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 LMO7Q8WWI1 1683 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 C20orf202A1L168 122 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 NDUFA2O43678 99 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 GYPAP02724 150 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 SNRPFP62306 86 aaKnown RBP-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 ATP5EP2Q5VTU8 51 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 XIRP2A4UGR9 3374 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 SZT2Q5T011 3432 aa-0.99□□□□□ -2.57
RNU4-49P-201ENST00000516080 GLI2P10070 1586 aa-1□□□□□ -2.57
RNU4-49P-201ENST00000516080 SMIM27A0A1W2PRY6 76 aa-1□□□□□ -2.57
RNU4-49P-201ENST00000516080 LINC00643Q86TS7 51 aa-1□□□□□ -2.57
RNU4-49P-201ENST00000516080 ABCC3O15438 1527 aa-1□□□□□ -2.57
RNU4-49P-201ENST00000516080 MUC3AQ02505 3323 aa-1□□□□□ -2.57
RNU4-49P-201ENST00000516080 CFAP47Q6ZTR5 3102 aa-1.01□□□□□ -2.57
RNU4-49P-201ENST00000516080 MKI67P46013 3256 aaKnown RBP-1.01□□□□□ -2.57
RNU4-49P-201ENST00000516080 USP34Q70CQ2 3546 aa-1.01□□□□□ -2.57
RNU4-49P-201ENST00000516080 CEP250Q9BV73 2442 aa-1.01□□□□□ -2.57
RNU4-49P-201ENST00000516080 POLR2KP53803 58 aaKnown RBP-1.01□□□□□ -2.57
RNU4-49P-201ENST00000516080 ENHOQ6UWT2 76 aa-1.01□□□□□ -2.57
RNU4-49P-201ENST00000516080 WFDC10BQ8IUB3 73 aa-1.01□□□□□ -2.57
RNU4-49P-201ENST00000516080 C2orf88Q9BSF0 95 aa-1.01□□□□□ -2.57
RNU4-49P-201ENST00000516080 UNC80Q8N2C7 3258 aa-1.02□□□□□ -2.57
RNU4-49P-201ENST00000516080 KANTRA0A1W2PQU2 76 aa-1.02□□□□□ -2.57
RNU4-49P-201ENST00000516080 SMIM13P0DJ93 91 aa-1.02□□□□□ -2.57
RNU4-49P-201ENST00000516080 DNAH14Q0VDD8 3507 aa-1.02□□□□□ -2.57
RNU4-49P-201ENST00000516080 NCMAPQ5T1S8 102 aa-1.02□□□□□ -2.57
RNU4-49P-201ENST00000516080 CNTLNQ9NXG0 1405 aa-1.02□□□□□ -2.57
RNU4-49P-201ENST00000516080 CLTCL1P53675 1640 aa-1.03□□□□□ -2.57
RNU4-49P-201ENST00000516080 EFCAB6Q5THR3 1501 aa-1.03□□□□□ -2.57
RNU4-49P-201ENST00000516080 S100A12P80511 92 aa-1.03□□□□□ -2.57
RNU4-49P-201ENST00000516080 NMES1Q9C002 83 aa-1.03□□□□□ -2.57
RNU4-49P-201ENST00000516080 LOC105371267A0A1B0GV96 52 aa-1.04□□□□□ -2.58
RNU4-49P-201ENST00000516080 H3BVH4 76 aa-1.04□□□□□ -2.58
RNU4-49P-201ENST00000516080 S100A16Q96FQ6 103 aaKnown RBP-1.04□□□□□ -2.58
RNU4-49P-201ENST00000516080 SCRIBQ14160 1630 aa-1.04□□□□□ -2.58
RNU4-49P-201ENST00000516080 CFAP74Q9C0B2 1584 aa-1.04□□□□□ -2.58
RNU4-49P-201ENST00000516080 DEFB114Q30KQ6 69 aa-1.05□□□□□ -2.58
RNU4-49P-201ENST00000516080 TMEM167BQ9NRX6 74 aa-1.05□□□□□ -2.58
RNU4-49P-201ENST00000516080 HMGN1P05114 100 aa-1.06□□□□□ -2.58
RNU4-49P-201ENST00000516080 TCEAL7Q9BRU2 100 aa-1.06□□□□□ -2.58
RNU4-49P-201ENST00000516080 RB1CC1Q8TDY2 1594 aa-1.06□□□□□ -2.58
RNU4-49P-201ENST00000516080 ABCA8O94911 1581 aa-1.07□□□□□ -2.58
RNU4-49P-201ENST00000516080 UGGT1Q9NYU2 1555 aa-1.07□□□□□ -2.58
RNU4-49P-201ENST00000516080 DEFB131AP59861 70 aa-1.07□□□□□ -2.58
RNU4-49P-201ENST00000516080 Q9H521 79 aa-1.07□□□□□ -2.58
RNU4-49P-201ENST00000516080 ABCA9Q8IUA7 1624 aa-1.07□□□□□ -2.58
RNU4-49P-201ENST00000516080 ABCC1P33527 1531 aa-1.08□□□□□ -2.58
RNU4-49P-201ENST00000516080 ASPMQ8IZT6 3477 aa-1.08□□□□□ -2.58
RNU4-49P-201ENST00000516080 EFCAB10A6NFE3 127 aa-1.08□□□□□ -2.58
RNU4-49P-201ENST00000516080 PYY3Q5JQD4 70 aa-1.08□□□□□ -2.58
RNU4-49P-201ENST00000516080 LINC00308Q8TCZ7 52 aa-1.08□□□□□ -2.58
RNU4-49P-201ENST00000516080 ANKARQ7Z5J8 1434 aa-1.08□□□□□ -2.58
RNU4-49P-201ENST00000516080 ABCA6Q8N139 1617 aa-1.08□□□□□ -2.58
RNU4-49P-201ENST00000516080 LOC400499M0QZD8 3231 aa-1.08□□□□□ -2.58
RNU4-49P-201ENST00000516080 AGLP35573 1532 aa-1.09□□□□□ -2.58
RNU4-49P-201ENST00000516080 DCAF1Q9Y4B6 1507 aa-1.09□□□□□ -2.58
RNU4-49P-201ENST00000516080 K7EMI3 77 aa-1.09□□□□□ -2.58
RNU4-49P-201ENST00000516080 M0R143 59 aa-1.09□□□□□ -2.58
RNU4-49P-201ENST00000516080 ATXN8Q156A1 80 aa-1.09□□□□□ -2.58
RNU4-49P-201ENST00000516080 DEFB133Q30KQ1 61 aa-1.09□□□□□ -2.58
RNU4-49P-201ENST00000516080 ATP6V1G2-DDX39BF2Z307 99 aa-1.1□□□□□ -2.59
RNU4-49P-201ENST00000516080 CD52P31358 61 aa-1.1□□□□□ -2.59
RNU4-49P-201ENST00000516080 SERF2P84101 59 aa-1.1□□□□□ -2.59
RNU4-49P-201ENST00000516080 ADIRFQ15847 76 aa-1.1□□□□□ -2.59
RNU4-49P-201ENST00000516080 S100ZQ8WXG8 99 aa-1.1□□□□□ -2.59
RNU4-49P-201ENST00000516080 GNG13Q9P2W3 67 aa-1.1□□□□□ -2.59
RNU4-49P-201ENST00000516080 PEG3Q9GZU2 1588 aa-1.1□□□□□ -2.59
RNU4-49P-201ENST00000516080 SYCP2Q9BX26 1530 aa-1.1□□□□□ -2.59
RNU4-49P-201ENST00000516080 IQGAP3Q86VI3 1631 aa-1.11□□□□□ -2.59
RNU4-49P-201ENST00000516080 LINC00587B1AMM8 73 aa-1.11□□□□□ -2.59
RNU4-49P-201ENST00000516080 H3BUT2 72 aa-1.11□□□□□ -2.59
RNU4-49P-201ENST00000516080 M0R1W7 72 aa-1.11□□□□□ -2.59
RNU4-49P-201ENST00000516080 DEFB121Q5J5C9 76 aa-1.11□□□□□ -2.59
RNU4-49P-201ENST00000516080 C14orf144Q96I85 54 aa-1.11□□□□□ -2.59
RNU4-49P-201ENST00000516080 IQGAP1P46940 1657 aa-1.12□□□□□ -2.59
RNU4-49P-201ENST00000516080 HTN1P15515 57 aa-1.12□□□□□ -2.59
RNU4-49P-201ENST00000516080 SMIM2Q9BVW6 85 aa-1.12□□□□□ -2.59
RNU4-49P-201ENST00000516080 RHPN1-AS1Q9BWJ2 59 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms