RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 UBR4Q5T4S7 5183 aa2.11□□□□□ -2.07
CAST-242ENST00000515063 IGHV6-1A0A0B4J1U7 121 aa2.11□□□□□ -2.07
CAST-242ENST00000515063 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
CAST-242ENST00000515063 CIRBP-AS1Q8TBR5 109 aa2.11□□□□□ -2.07
CAST-242ENST00000515063 TENM2Q9NT68 2774 aa2.11□□□□□ -2.07
CAST-242ENST00000515063 LY6G6CO95867 125 aa2.1□□□□□ -2.07
CAST-242ENST00000515063 COA5Q86WW8 74 aa2.1□□□□□ -2.07
CAST-242ENST00000515063 BRK1Q8WUW1 75 aa2.1□□□□□ -2.07
CAST-242ENST00000515063 LINC01558Q9Y6Z2 57 aa2.1□□□□□ -2.07
CAST-242ENST00000515063 DNAH5Q8TE73 4624 aa2.1□□□□□ -2.07
CAST-242ENST00000515063 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
CAST-242ENST00000515063 SRRM2Q9UQ35 2752 aaKnown RBP2.1□□□□□ -2.07
CAST-242ENST00000515063 LINC00313P59037 77 aa2.09□□□□□ -2.07
CAST-242ENST00000515063 RPS29P62273 56 aaKnown RBP2.09□□□□□ -2.07
CAST-242ENST00000515063 RYR2Q92736 4967 aa2.08□□□□□ -2.08
CAST-242ENST00000515063 KMT2AQ03164 3969 aa2.08□□□□□ -2.08
CAST-242ENST00000515063 RYR1P21817 5038 aa2.08□□□□□ -2.08
CAST-242ENST00000515063 SPINK1P00995 79 aa2.08□□□□□ -2.08
CAST-242ENST00000515063 ACYP2P14621 99 aa2.08□□□□□ -2.08
CAST-242ENST00000515063 KRTAP13-2Q52LG2 175 aa2.08□□□□□ -2.08
CAST-242ENST00000515063 PCOTHQ58A44 107 aa2.08□□□□□ -2.08
CAST-242ENST00000515063 Q5VV11 94 aa2.08□□□□□ -2.08
CAST-242ENST00000515063 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
CAST-242ENST00000515063 FRAS1Q86XX4 4008 aa2.07□□□□□ -2.08
CAST-242ENST00000515063 A8MUN3 132 aa2.07□□□□□ -2.08
CAST-242ENST00000515063 HRES1P13985 223 aa2.07□□□□□ -2.08
CAST-242ENST00000515063 Q5W150 140 aa2.07□□□□□ -2.08
CAST-242ENST00000515063 SPAG11AQ6PDA7 123 aa2.07□□□□□ -2.08
CAST-242ENST00000515063 SPINK6Q6UWN8 80 aa2.07□□□□□ -2.08
CAST-242ENST00000515063 PKD1P98161 4303 aa2.06□□□□□ -2.08
CAST-242ENST00000515063 DMAC1Q96GE9 116 aa2.06□□□□□ -2.08
CAST-242ENST00000515063 SACSQ9NZJ4 4579 aa2.06□□□□□ -2.08
CAST-242ENST00000515063 HERC2O95714 4834 aa2.05□□□□□ -2.08
CAST-242ENST00000515063 CHKB-CPT1BH3BT56 60 aa2.05□□□□□ -2.08
CAST-242ENST00000515063 ATP11AUNQ6ZP68 121 aa2.05□□□□□ -2.08
CAST-242ENST00000515063 PRR15LQ9BU68 103 aa2.05□□□□□ -2.08
CAST-242ENST00000515063 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
CAST-242ENST00000515063 FAT2Q9NYQ8 4349 aa2.04□□□□□ -2.08
CAST-242ENST00000515063 LRP1BQ9NZR2 4599 aa2.03□□□□□ -2.08
CAST-242ENST00000515063 A6NED7 52 aa2.02□□□□□ -2.09
CAST-242ENST00000515063 PMAIP1Q13794 54 aa2.02□□□□□ -2.09
CAST-242ENST00000515063 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
CAST-242ENST00000515063 RBM12B-AS1Q9P1G2 102 aa2.02□□□□□ -2.09
CAST-242ENST00000515063 C7orf65Q6ZTY9 151 aa2.01□□□□□ -2.09
CAST-242ENST00000515063 LCA10Q71F78 164 aa2.01□□□□□ -2.09
CAST-242ENST00000515063 VPS13BQ7Z7G8 4022 aa2□□□□□ -2.09
CAST-242ENST00000515063 A8MUU9 505 aa2□□□□□ -2.09
CAST-242ENST00000515063 K7ERS5 55 aa2□□□□□ -2.09
CAST-242ENST00000515063 LUZP6Q538Z0 58 aa2□□□□□ -2.09
CAST-242ENST00000515063 SPTSSBQ8NFR3 76 aa2□□□□□ -2.09
CAST-242ENST00000515063 C20orf166-AS1Q96NR2 134 aa2□□□□□ -2.09
CAST-242ENST00000515063 A0A1B0GU69 56 aa1.99□□□□□ -2.09
CAST-242ENST00000515063 A6NN06 94 aa1.99□□□□□ -2.09
CAST-242ENST00000515063 SPATA8Q6RVD6 105 aa1.99□□□□□ -2.09
CAST-242ENST00000515063 KIAA1109Q2LD37 5005 aa1.99□□□□□ -2.09
CAST-242ENST00000515063 DYNC1H1Q14204 4646 aaKnown RBP1.99□□□□□ -2.09
CAST-242ENST00000515063 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
CAST-242ENST00000515063 PKHD1L1Q86WI1 4243 aa1.98□□□□□ -2.09
CAST-242ENST00000515063 UQCR11O14957 56 aa1.98□□□□□ -2.09
CAST-242ENST00000515063 SPINK7P58062 85 aa1.98□□□□□ -2.09
CAST-242ENST00000515063 KRTAP10-4P60372 401 aaPredicted RBP1.98□□□□□ -2.09
CAST-242ENST00000515063 KTN1-AS1Q86SY8 53 aa1.98□□□□□ -2.09
CAST-242ENST00000515063 KRTAP10-10P60014 251 aa1.97□□□□□ -2.09
CAST-242ENST00000515063 RETNLBQ9BQ08 111 aa1.97□□□□□ -2.09
CAST-242ENST00000515063 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
CAST-242ENST00000515063 PKHD1P08F94 4074 aa1.95□□□□□ -2.1
CAST-242ENST00000515063 ABCA13Q86UQ4 5058 aa1.93□□□□□ -2.1
CAST-242ENST00000515063 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
CAST-242ENST00000515063 SMR3BP02814 79 aaPredicted RBP1.93□□□□□ -2.1
CAST-242ENST00000515063 COX6B2Q6YFQ2 88 aa1.93□□□□□ -2.1
CAST-242ENST00000515063 FAT1Q14517 4588 aa1.92□□□□□ -2.1
CAST-242ENST00000515063 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
CAST-242ENST00000515063 C9orf92A6NGG3 77 aa1.91□□□□□ -2.1
CAST-242ENST00000515063 FLG2Q5D862 2391 aaPredicted RBP1.91□□□□□ -2.1
CAST-242ENST00000515063 RPL37P61927 97 aaKnown RBP1.9□□□□□ -2.11
CAST-242ENST00000515063 TNXBP22105 4242 aa1.9□□□□□ -2.11
CAST-242ENST00000515063 HERC1Q15751 4861 aa1.9□□□□□ -2.11
CAST-242ENST00000515063 HSPG2P98160 4391 aa1.89□□□□□ -2.11
CAST-242ENST00000515063 A0A1B0GU33 70 aa1.89□□□□□ -2.11
CAST-242ENST00000515063 H1FX-AS1Q4G0G2 97 aa1.89□□□□□ -2.11
CAST-242ENST00000515063 Q5VSD8 79 aa1.88□□□□□ -2.11
CAST-242ENST00000515063 H0YAA0 97 aa1.86□□□□□ -2.11
CAST-242ENST00000515063 LRP1Q07954 4544 aaKnown RBP1.86□□□□□ -2.11
CAST-242ENST00000515063 DMBT1Q9UGM3 2413 aaPredicted RBP1.84□□□□□ -2.11
CAST-242ENST00000515063 MT1HL1P0DM35 61 aa1.84□□□□□ -2.11
CAST-242ENST00000515063 TPRXLQ17RH7 258 aa1.84□□□□□ -2.11
CAST-242ENST00000515063 SPINT4Q6UDR6 99 aa1.84□□□□□ -2.11
CAST-242ENST00000515063 S4R3F8 94 aa1.84□□□□□ -2.11
CAST-242ENST00000515063 LINC01554Q52M75 96 aa1.83□□□□□ -2.12
CAST-242ENST00000515063 ADM2Q7Z4H4 148 aa1.81□□□□□ -2.12
CAST-242ENST00000515063 MYCBP2O75592 4640 aa1.81□□□□□ -2.12
CAST-242ENST00000515063 MUC2Q02817 5179 aa1.8□□□□□ -2.12
CAST-242ENST00000515063 KRTAP25-1Q3LHN0 102 aa1.8□□□□□ -2.12
CAST-242ENST00000515063 CSAG1Q6PB30 78 aa1.8□□□□□ -2.12
CAST-242ENST00000515063 M0QZ58 72 aa1.79□□□□□ -2.12
CAST-242ENST00000515063 ROMO1P60602 79 aa1.79□□□□□ -2.12
CAST-242ENST00000515063 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
CAST-242ENST00000515063 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
CAST-242ENST00000515063 P0C880 135 aa1.76□□□□□ -2.13
CAST-242ENST00000515063 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms