RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
GPBP1-208ENST00000514387 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
GPBP1-208ENST00000514387 SACSQ9NZJ4 4579 aa4.42□□□□□ -1.7
GPBP1-208ENST00000514387 STAB2Q8WWQ8 2551 aa4.41□□□□□ -1.7
GPBP1-208ENST00000514387 INE1O15225 51 aa4.36□□□□□ -1.71
GPBP1-208ENST00000514387 R4GN34 69 aa4.33□□□□□ -1.72
GPBP1-208ENST00000514387 DNAH5Q8TE73 4624 aa4.33□□□□□ -1.72
GPBP1-208ENST00000514387 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
GPBP1-208ENST00000514387 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
GPBP1-208ENST00000514387 FBN3Q75N90 2809 aa4.3□□□□□ -1.72
GPBP1-208ENST00000514387 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
GPBP1-208ENST00000514387 KRTAP10-8P60410 259 aa4.28□□□□□ -1.72
GPBP1-208ENST00000514387 DNHD1Q96M86 4753 aa4.28□□□□□ -1.72
GPBP1-208ENST00000514387 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
GPBP1-208ENST00000514387 STARD9Q9P2P6 4700 aa4.27□□□□□ -1.73
GPBP1-208ENST00000514387 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
GPBP1-208ENST00000514387 KMT2AQ03164 3969 aa4.24□□□□□ -1.73
GPBP1-208ENST00000514387 VPS13BQ7Z7G8 4022 aa4.19□□□□□ -1.74
GPBP1-208ENST00000514387 KRTAP10-4P60372 401 aaPredicted RBP4.18□□□□□ -1.74
GPBP1-208ENST00000514387 PKD1P98161 4303 aa4.17□□□□□ -1.74
GPBP1-208ENST00000514387 MYCBP2O75592 4640 aa4.16□□□□□ -1.74
GPBP1-208ENST00000514387 PKHD1P08F94 4074 aa4.14□□□□□ -1.75
GPBP1-208ENST00000514387 DMBT1Q9UGM3 2413 aaPredicted RBP4.12□□□□□ -1.75
GPBP1-208ENST00000514387 APOBP04114 4563 aaKnown RBP4.11□□□□□ -1.75
GPBP1-208ENST00000514387 LRP1Q07954 4544 aaKnown RBP4.1□□□□□ -1.75
GPBP1-208ENST00000514387 FAT2Q9NYQ8 4349 aa4.09□□□□□ -1.76
GPBP1-208ENST00000514387 SMR3BP02814 79 aaPredicted RBP4.08□□□□□ -1.76
GPBP1-208ENST00000514387 TNXBP22105 4242 aa4.04□□□□□ -1.76
GPBP1-208ENST00000514387 FAT3Q8TDW7 4589 aa4.04□□□□□ -1.76
GPBP1-208ENST00000514387 DYNC1H1Q14204 4646 aaKnown RBP4.03□□□□□ -1.76
GPBP1-208ENST00000514387 HSPG2P98160 4391 aa4.01□□□□□ -1.77
GPBP1-208ENST00000514387 A0A1B0GVY2 172 aa4.01□□□□□ -1.77
GPBP1-208ENST00000514387 FAT1Q14517 4588 aa3.99□□□□□ -1.77
GPBP1-208ENST00000514387 TNP1P09430 55 aa3.93□□□□□ -1.78
GPBP1-208ENST00000514387 Q5VSD8 79 aa3.88□□□□□ -1.79
GPBP1-208ENST00000514387 LORP23490 312 aaPredicted RBP3.85□□□□□ -1.79
GPBP1-208ENST00000514387 HYDINQ4G0P3 5121 aa3.83□□□□□ -1.8
GPBP1-208ENST00000514387 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
GPBP1-208ENST00000514387 KMT2CQ8NEZ4 4911 aaKnown RBP3.78□□□□□ -1.8
GPBP1-208ENST00000514387 RYR3Q15413 4870 aa3.68□□□□□ -1.82
GPBP1-208ENST00000514387 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
GPBP1-208ENST00000514387 KRTAP19-2Q3LHN2 52 aa3.64□□□□□ -1.83
GPBP1-208ENST00000514387 RYR2Q92736 4967 aa3.64□□□□□ -1.83
GPBP1-208ENST00000514387 KIAA1109Q2LD37 5005 aa3.6□□□□□ -1.83
GPBP1-208ENST00000514387 KRTAP10-10P60014 251 aa3.6□□□□□ -1.83
GPBP1-208ENST00000514387 EPPK1P58107 5090 aaKnown RBP3.6□□□□□ -1.83
GPBP1-208ENST00000514387 KRTAP8-1Q8IUC2 63 aa3.59□□□□□ -1.83
GPBP1-208ENST00000514387 HERC1Q15751 4861 aa3.59□□□□□ -1.83
GPBP1-208ENST00000514387 KRTAP4-5Q9BYR2 181 aa3.57□□□□□ -1.84
GPBP1-208ENST00000514387 MUC17Q685J3 4493 aa3.57□□□□□ -1.84
GPBP1-208ENST00000514387 BIRC6Q9NR09 4857 aa3.56□□□□□ -1.84
GPBP1-208ENST00000514387 LRP2P98164 4655 aa3.56□□□□□ -1.84
GPBP1-208ENST00000514387 LPAP08519 4548 aa3.56□□□□□ -1.84
GPBP1-208ENST00000514387 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
GPBP1-208ENST00000514387 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
GPBP1-208ENST00000514387 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
GPBP1-208ENST00000514387 RYR1P21817 5038 aa3.5□□□□□ -1.85
GPBP1-208ENST00000514387 KRTAP17-1Q9BYP8 105 aa3.47□□□□□ -1.85
GPBP1-208ENST00000514387 LCE2BO14633 110 aa3.46□□□□□ -1.86
GPBP1-208ENST00000514387 HERC2O95714 4834 aa3.45□□□□□ -1.86
GPBP1-208ENST00000514387 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
GPBP1-208ENST00000514387 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
GPBP1-208ENST00000514387 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
GPBP1-208ENST00000514387 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
GPBP1-208ENST00000514387 LCE2AQ5TA79 106 aaPredicted RBP3.38□□□□□ -1.87
GPBP1-208ENST00000514387 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
GPBP1-208ENST00000514387 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
GPBP1-208ENST00000514387 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
GPBP1-208ENST00000514387 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
GPBP1-208ENST00000514387 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
GPBP1-208ENST00000514387 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
GPBP1-208ENST00000514387 MT1XP80297 61 aa3.25□□□□□ -1.89
GPBP1-208ENST00000514387 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
GPBP1-208ENST00000514387 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
GPBP1-208ENST00000514387 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
GPBP1-208ENST00000514387 LCE2CQ5TA81 110 aa3.24□□□□□ -1.89
GPBP1-208ENST00000514387 FSIP2Q5CZC0 6907 aa3.21□□□□□ -1.89
GPBP1-208ENST00000514387 MT1BP07438 61 aa3.19□□□□□ -1.9
GPBP1-208ENST00000514387 MT2AP02795 61 aa3.18□□□□□ -1.9
GPBP1-208ENST00000514387 UBR4Q5T4S7 5183 aa3.17□□□□□ -1.9
GPBP1-208ENST00000514387 MT1FP04733 61 aa3.16□□□□□ -1.9
GPBP1-208ENST00000514387 M0R2T5 61 aa3.15□□□□□ -1.91
GPBP1-208ENST00000514387 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
GPBP1-208ENST00000514387 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
GPBP1-208ENST00000514387 MT1HP80294 61 aa3.12□□□□□ -1.91
GPBP1-208ENST00000514387 KRTAP9-8Q9BYQ0 159 aa3.12□□□□□ -1.91
GPBP1-208ENST00000514387 RNF213Q63HN8 5207 aa3.12□□□□□ -1.91
GPBP1-208ENST00000514387 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
GPBP1-208ENST00000514387 HMCN2Q8NDA2 5059 aa3.07□□□□□ -1.92
GPBP1-208ENST00000514387 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
GPBP1-208ENST00000514387 LOC100996750A0A140TA64 210 aa3.03□□□□□ -1.92
GPBP1-208ENST00000514387 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.92
GPBP1-208ENST00000514387 KRTAP4-6Q9BYQ5 205 aa3.03□□□□□ -1.92
GPBP1-208ENST00000514387 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
GPBP1-208ENST00000514387 MUC2Q02817 5179 aa3.01□□□□□ -1.93
GPBP1-208ENST00000514387 KRTAP9-3Q9BYQ3 159 aa2.99□□□□□ -1.93
GPBP1-208ENST00000514387 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
GPBP1-208ENST00000514387 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
GPBP1-208ENST00000514387 FAT4Q6V0I7 4981 aa2.89□□□□□ -1.95
GPBP1-208ENST00000514387 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms