RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 A0A1B0GVY2 172 aa6.33□□□□□ -1.4
PRDM16-207ENST00000512462 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
PRDM16-207ENST00000512462 XP32Q5T750 250 aa6.3□□□□□ -1.4
PRDM16-207ENST00000512462 RPL37P61927 97 aaKnown RBP6.29□□□□□ -1.4
PRDM16-207ENST00000512462 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
PRDM16-207ENST00000512462 R4GN34 69 aa6.26□□□□□ -1.41
PRDM16-207ENST00000512462 M0QZ58 72 aa6.24□□□□□ -1.41
PRDM16-207ENST00000512462 M0R2T5 61 aa6.24□□□□□ -1.41
PRDM16-207ENST00000512462 APOBP04114 4563 aaKnown RBP6.24□□□□□ -1.41
PRDM16-207ENST00000512462 RYR2Q92736 4967 aa6.23□□□□□ -1.41
PRDM16-207ENST00000512462 SEC61BP60468 96 aaKnown RBP6.21□□□□□ -1.42
PRDM16-207ENST00000512462 H0YAA0 97 aa6.2□□□□□ -1.42
PRDM16-207ENST00000512462 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
PRDM16-207ENST00000512462 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
PRDM16-207ENST00000512462 LUZP6Q538Z0 58 aa6.17□□□□□ -1.42
PRDM16-207ENST00000512462 KRTAP10-8P60410 259 aa6.16□□□□□ -1.42
PRDM16-207ENST00000512462 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
PRDM16-207ENST00000512462 KIAA1109Q2LD37 5005 aa6.15□□□□□ -1.42
PRDM16-207ENST00000512462 PKHD1L1Q86WI1 4243 aa6.15□□□□□ -1.42
PRDM16-207ENST00000512462 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
PRDM16-207ENST00000512462 KRTAP10-4P60372 401 aaPredicted RBP6.14□□□□□ -1.43
PRDM16-207ENST00000512462 LRP1Q07954 4544 aaKnown RBP6.11□□□□□ -1.43
PRDM16-207ENST00000512462 RYR1P21817 5038 aa6.1□□□□□ -1.43
PRDM16-207ENST00000512462 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
PRDM16-207ENST00000512462 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
PRDM16-207ENST00000512462 HSPG2P98160 4391 aa6□□□□□ -1.45
PRDM16-207ENST00000512462 RYR3Q15413 4870 aa6□□□□□ -1.45
PRDM16-207ENST00000512462 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
PRDM16-207ENST00000512462 TPRXLQ17RH7 258 aa5.98□□□□□ -1.45
PRDM16-207ENST00000512462 TNXBP22105 4242 aa5.97□□□□□ -1.45
PRDM16-207ENST00000512462 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
PRDM16-207ENST00000512462 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
PRDM16-207ENST00000512462 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
PRDM16-207ENST00000512462 KRTAP12-2P59991 146 aa5.84□□□□□ -1.47
PRDM16-207ENST00000512462 KRTAP10-6P60371 365 aaPredicted RBP5.84□□□□□ -1.48
PRDM16-207ENST00000512462 LRP2P98164 4655 aa5.81□□□□□ -1.48
PRDM16-207ENST00000512462 KRTAP3-3Q9BYR6 98 aa5.81□□□□□ -1.48
PRDM16-207ENST00000512462 EPPK1P58107 5090 aaKnown RBP5.77□□□□□ -1.49
PRDM16-207ENST00000512462 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
PRDM16-207ENST00000512462 KRTAP3-2Q9BYR7 98 aa5.71□□□□□ -1.49
PRDM16-207ENST00000512462 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
PRDM16-207ENST00000512462 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
PRDM16-207ENST00000512462 LPAP08519 4548 aa5.63□□□□□ -1.51
PRDM16-207ENST00000512462 HERC2O95714 4834 aa5.63□□□□□ -1.51
PRDM16-207ENST00000512462 LORP23490 312 aaPredicted RBP5.61□□□□□ -1.51
PRDM16-207ENST00000512462 ABCA13Q86UQ4 5058 aa5.57□□□□□ -1.52
PRDM16-207ENST00000512462 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
PRDM16-207ENST00000512462 TNP1P09430 55 aa5.56□□□□□ -1.52
PRDM16-207ENST00000512462 MUC2Q02817 5179 aa5.46□□□□□ -1.54
PRDM16-207ENST00000512462 BIRC6Q9NR09 4857 aa5.45□□□□□ -1.54
PRDM16-207ENST00000512462 MUC17Q685J3 4493 aa5.38□□□□□ -1.55
PRDM16-207ENST00000512462 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
PRDM16-207ENST00000512462 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
PRDM16-207ENST00000512462 HERC1Q15751 4861 aa5.33□□□□□ -1.56
PRDM16-207ENST00000512462 PP632Q6XCG6 107 aa5.27□□□□□ -1.57
PRDM16-207ENST00000512462 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
PRDM16-207ENST00000512462 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
PRDM16-207ENST00000512462 UBR4Q5T4S7 5183 aa5.16□□□□□ -1.58
PRDM16-207ENST00000512462 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
PRDM16-207ENST00000512462 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
PRDM16-207ENST00000512462 FLGP20930 4061 aaPredicted RBP5.11□□□□□ -1.59
PRDM16-207ENST00000512462 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
PRDM16-207ENST00000512462 MT1HP80294 61 aa5.06□□□□□ -1.6
PRDM16-207ENST00000512462 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
PRDM16-207ENST00000512462 MT1FP04733 61 aa5.01□□□□□ -1.61
PRDM16-207ENST00000512462 MT2AP02795 61 aa4.99□□□□□ -1.61
PRDM16-207ENST00000512462 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
PRDM16-207ENST00000512462 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
PRDM16-207ENST00000512462 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
PRDM16-207ENST00000512462 INE1O15225 51 aa4.84□□□□□ -1.63
PRDM16-207ENST00000512462 SPRR2GQ9BYE4 73 aa4.84□□□□□ -1.63
PRDM16-207ENST00000512462 KRTAP12-3P60328 96 aa4.84□□□□□ -1.64
PRDM16-207ENST00000512462 CRCT1Q9UGL9 99 aa4.77□□□□□ -1.65
PRDM16-207ENST00000512462 USH2AO75445 5202 aa4.75□□□□□ -1.65
PRDM16-207ENST00000512462 KRTAP9-8Q9BYQ0 159 aa4.73□□□□□ -1.65
PRDM16-207ENST00000512462 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.65
PRDM16-207ENST00000512462 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
PRDM16-207ENST00000512462 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
PRDM16-207ENST00000512462 MT1BP07438 61 aa4.64□□□□□ -1.67
PRDM16-207ENST00000512462 MT1XP80297 61 aa4.61□□□□□ -1.67
PRDM16-207ENST00000512462 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
PRDM16-207ENST00000512462 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
PRDM16-207ENST00000512462 KRTAP10-5P60370 271 aa4.59□□□□□ -1.68
PRDM16-207ENST00000512462 KMT2DO14686 5537 aa4.58□□□□□ -1.68
PRDM16-207ENST00000512462 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
PRDM16-207ENST00000512462 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
PRDM16-207ENST00000512462 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
PRDM16-207ENST00000512462 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
PRDM16-207ENST00000512462 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
PRDM16-207ENST00000512462 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
PRDM16-207ENST00000512462 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
PRDM16-207ENST00000512462 LCE2BO14633 110 aa4.5□□□□□ -1.69
PRDM16-207ENST00000512462 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.7
PRDM16-207ENST00000512462 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
PRDM16-207ENST00000512462 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
PRDM16-207ENST00000512462 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
PRDM16-207ENST00000512462 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
PRDM16-207ENST00000512462 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
PRDM16-207ENST00000512462 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
PRDM16-207ENST00000512462 MT1GP13640 62 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms