RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 APOBP04114 4563 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-208ENST00000511955 GVQW2A0A096LPI5 108 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-208ENST00000511955 COX17Q14061 63 aa2.84□□□□□ -1.95
TRAPPC11-208ENST00000511955 TPRXLQ17RH7 258 aa2.84□□□□□ -1.95
TRAPPC11-208ENST00000511955 UNQ6190/PRO20217Q6UXQ8 127 aa2.84□□□□□ -1.95
TRAPPC11-208ENST00000511955 SPACA4Q8TDM5 124 aa2.84□□□□□ -1.95
TRAPPC11-208ENST00000511955 DSCR10P59022 87 aa2.84□□□□□ -1.96
TRAPPC11-208ENST00000511955 Q8IZM0 81 aa2.84□□□□□ -1.96
TRAPPC11-208ENST00000511955 A0A1B0GU69 56 aa2.83□□□□□ -1.96
TRAPPC11-208ENST00000511955 K7EQZ3 153 aa2.83□□□□□ -1.96
TRAPPC11-208ENST00000511955 A0A096LNI7 61 aa2.82□□□□□ -1.96
TRAPPC11-208ENST00000511955 IGLV6-57P01721 117 aa2.82□□□□□ -1.96
TRAPPC11-208ENST00000511955 FAT1Q14517 4588 aa2.82□□□□□ -1.96
TRAPPC11-208ENST00000511955 HSPG2P98160 4391 aa2.82□□□□□ -1.96
TRAPPC11-208ENST00000511955 PCLOQ9Y6V0 5065 aa2.81□□□□□ -1.96
TRAPPC11-208ENST00000511955 A0A1W2PNN7 141 aa2.81□□□□□ -1.96
TRAPPC11-208ENST00000511955 C6orf48Q9UBA6 75 aa2.81□□□□□ -1.96
TRAPPC11-208ENST00000511955 ACYP2P14621 99 aa2.81□□□□□ -1.96
TRAPPC11-208ENST00000511955 RYR1P21817 5038 aa2.8□□□□□ -1.96
TRAPPC11-208ENST00000511955 IGLV5-48A0A075B6I7 105 aa2.8□□□□□ -1.96
TRAPPC11-208ENST00000511955 IGKV2D-30A0A075B6S6 120 aa2.8□□□□□ -1.96
TRAPPC11-208ENST00000511955 Q6ZSA8 131 aa2.8□□□□□ -1.96
TRAPPC11-208ENST00000511955 ABCA13Q86UQ4 5058 aa2.8□□□□□ -1.96
TRAPPC11-208ENST00000511955 DNAH8Q96JB1 4490 aa2.79□□□□□ -1.96
TRAPPC11-208ENST00000511955 WFDC13Q8IUB5 93 aa2.79□□□□□ -1.96
TRAPPC11-208ENST00000511955 KRTAP29-1A8MX34 341 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-208ENST00000511955 Q5VSD8 79 aa2.79□□□□□ -1.96
TRAPPC11-208ENST00000511955 HERC2O95714 4834 aa2.79□□□□□ -1.96
TRAPPC11-208ENST00000511955 FLG2Q5D862 2391 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-208ENST00000511955 MYCBP2O75592 4640 aa2.78□□□□□ -1.96
TRAPPC11-208ENST00000511955 KRTAP7-1Q8IUC3 87 aa2.78□□□□□ -1.96
TRAPPC11-208ENST00000511955 VPS13BQ7Z7G8 4022 aa2.76□□□□□ -1.97
TRAPPC11-208ENST00000511955 SSBP3-AS1Q7Z2R9 100 aa2.76□□□□□ -1.97
TRAPPC11-208ENST00000511955 PCOTHQ58A44 107 aa2.75□□□□□ -1.97
TRAPPC11-208ENST00000511955 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
TRAPPC11-208ENST00000511955 DMBT1Q9UGM3 2413 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-208ENST00000511955 KRTAP9-3Q9BYQ3 159 aa2.74□□□□□ -1.97
TRAPPC11-208ENST00000511955 LRP1Q07954 4544 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-208ENST00000511955 TP53AIP1Q9HCN2 124 aa2.72□□□□□ -1.97
TRAPPC11-208ENST00000511955 KRTAP10-4P60372 401 aaPredicted RBP2.71□□□□□ -1.97
TRAPPC11-208ENST00000511955 PRLHP81277 87 aa2.7□□□□□ -1.98
TRAPPC11-208ENST00000511955 HERC1Q15751 4861 aa2.7□□□□□ -1.98
TRAPPC11-208ENST00000511955 DEFB105AQ8NG35 78 aa2.7□□□□□ -1.98
TRAPPC11-208ENST00000511955 ANAPC11Q9NYG5 84 aa2.68□□□□□ -1.98
TRAPPC11-208ENST00000511955 MMP24-AS1A0A0U1RRL7 71 aa2.68□□□□□ -1.98
TRAPPC11-208ENST00000511955 INE1O15225 51 aa2.67□□□□□ -1.98
TRAPPC11-208ENST00000511955 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
TRAPPC11-208ENST00000511955 SPINK6Q6UWN8 80 aa2.67□□□□□ -1.98
TRAPPC11-208ENST00000511955 Q6ZRX8 168 aa2.67□□□□□ -1.98
TRAPPC11-208ENST00000511955 KRTAP10-8P60410 259 aa2.65□□□□□ -1.98
TRAPPC11-208ENST00000511955 CRIPTQ9P021 101 aa2.65□□□□□ -1.99
TRAPPC11-208ENST00000511955 PKHD1L1Q86WI1 4243 aa2.65□□□□□ -1.99
TRAPPC11-208ENST00000511955 FAT3Q8TDW7 4589 aa2.64□□□□□ -1.99
TRAPPC11-208ENST00000511955 IGFL1Q6UW32 110 aa2.64□□□□□ -1.99
TRAPPC11-208ENST00000511955 SPRR1AP35321 89 aa2.63□□□□□ -1.99
TRAPPC11-208ENST00000511955 KRTAP13-1Q8IUC0 172 aa2.63□□□□□ -1.99
TRAPPC11-208ENST00000511955 KRTAP1-4P0C5Y4 121 aa2.63□□□□□ -1.99
TRAPPC11-208ENST00000511955 MT1HL1P0DM35 61 aa2.62□□□□□ -1.99
TRAPPC11-208ENST00000511955 PLAC4Q8WY50 150 aa2.62□□□□□ -1.99
TRAPPC11-208ENST00000511955 TNXBP22105 4242 aa2.61□□□□□ -1.99
TRAPPC11-208ENST00000511955 KRTAP13-2Q52LG2 175 aa2.6□□□□□ -1.99
TRAPPC11-208ENST00000511955 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
TRAPPC11-208ENST00000511955 MRPL34Q9BQ48 92 aaKnown RBP2.58□□□□□ -2
TRAPPC11-208ENST00000511955 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
TRAPPC11-208ENST00000511955 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
TRAPPC11-208ENST00000511955 H0YAA0 97 aa2.56□□□□□ -2
TRAPPC11-208ENST00000511955 LPAP08519 4548 aa2.55□□□□□ -2
TRAPPC11-208ENST00000511955 RNF213Q63HN8 5207 aa2.55□□□□□ -2
TRAPPC11-208ENST00000511955 LRP2P98164 4655 aa2.55□□□□□ -2
TRAPPC11-208ENST00000511955 SPRR1BP22528 89 aa2.54□□□□□ -2
TRAPPC11-208ENST00000511955 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
TRAPPC11-208ENST00000511955 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
TRAPPC11-208ENST00000511955 MUC2Q02817 5179 aa2.53□□□□□ -2
TRAPPC11-208ENST00000511955 SPINK1P00995 79 aa2.51□□□□□ -2.01
TRAPPC11-208ENST00000511955 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
TRAPPC11-208ENST00000511955 H1FX-AS1Q4G0G2 97 aa2.48□□□□□ -2.01
TRAPPC11-208ENST00000511955 C9orf92A6NGG3 77 aa2.48□□□□□ -2.01
TRAPPC11-208ENST00000511955 KRTAP12-2P59991 146 aa2.46□□□□□ -2.02
TRAPPC11-208ENST00000511955 RPS29P62273 56 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-208ENST00000511955 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
TRAPPC11-208ENST00000511955 RPL37P61927 97 aaKnown RBP2.42□□□□□ -2.02
TRAPPC11-208ENST00000511955 COX6B2Q6YFQ2 88 aa2.42□□□□□ -2.02
TRAPPC11-208ENST00000511955 FAT4Q6V0I7 4981 aa2.39□□□□□ -2.03
TRAPPC11-208ENST00000511955 KRTAP4-1Q9BYQ7 146 aa2.36□□□□□ -2.03
TRAPPC11-208ENST00000511955 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
TRAPPC11-208ENST00000511955 KRTAP13-4Q3LI77 160 aa2.33□□□□□ -2.04
TRAPPC11-208ENST00000511955 MUC17Q685J3 4493 aa2.32□□□□□ -2.04
TRAPPC11-208ENST00000511955 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
TRAPPC11-208ENST00000511955 S4R3F8 94 aa2.29□□□□□ -2.04
TRAPPC11-208ENST00000511955 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
TRAPPC11-208ENST00000511955 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
TRAPPC11-208ENST00000511955 A0A0D9SG42 100 aa2.27□□□□□ -2.05
TRAPPC11-208ENST00000511955 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC11-208ENST00000511955 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
TRAPPC11-208ENST00000511955 M0R2T5 61 aa2.26□□□□□ -2.05
TRAPPC11-208ENST00000511955 KRTAP10-6P60371 365 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC11-208ENST00000511955 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
TRAPPC11-208ENST00000511955 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
TRAPPC11-208ENST00000511955 MT1HP80294 61 aa2.23□□□□□ -2.05
TRAPPC11-208ENST00000511955 FSIP2Q5CZC0 6907 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms