RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
HMGB2-205ENST00000511316 UBR4Q5T4S7 5183 aa7.22□□□□□ -1.25
HMGB2-205ENST00000511316 H3BS24 57 aa7.21□□□□□ -1.26
HMGB2-205ENST00000511316 KRTAP13-2Q52LG2 175 aa7.21□□□□□ -1.26
HMGB2-205ENST00000511316 LRP2P98164 4655 aa7.2□□□□□ -1.26
HMGB2-205ENST00000511316 LPAP08519 4548 aa7.15□□□□□ -1.27
HMGB2-205ENST00000511316 TYMSOSQ8TAI1 123 aa7.13□□□□□ -1.27
HMGB2-205ENST00000511316 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
HMGB2-205ENST00000511316 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
HMGB2-205ENST00000511316 RNF213Q63HN8 5207 aa7.06□□□□□ -1.28
HMGB2-205ENST00000511316 LINC00304Q8N9R0 145 aa7.05□□□□□ -1.28
HMGB2-205ENST00000511316 PRAC1Q96KF2 57 aa6.99□□□□□ -1.29
HMGB2-205ENST00000511316 C20orf166-AS1Q96NR2 134 aa6.99□□□□□ -1.29
HMGB2-205ENST00000511316 A8MUU9 505 aa6.98□□□□□ -1.29
HMGB2-205ENST00000511316 MUC2Q02817 5179 aa6.96□□□□□ -1.3
HMGB2-205ENST00000511316 K7ERS5 55 aa6.92□□□□□ -1.3
HMGB2-205ENST00000511316 A0A1B0GU33 70 aa6.92□□□□□ -1.3
HMGB2-205ENST00000511316 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
HMGB2-205ENST00000511316 H1FX-AS1Q4G0G2 97 aa6.88□□□□□ -1.31
HMGB2-205ENST00000511316 LCE2DQ5TA82 110 aaPredicted RBP6.88□□□□□ -1.31
HMGB2-205ENST00000511316 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
HMGB2-205ENST00000511316 H0YAA0 97 aa6.85□□□□□ -1.31
HMGB2-205ENST00000511316 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
HMGB2-205ENST00000511316 MUC17Q685J3 4493 aa6.8□□□□□ -1.32
HMGB2-205ENST00000511316 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
HMGB2-205ENST00000511316 TPRXLQ17RH7 258 aa6.78□□□□□ -1.32
HMGB2-205ENST00000511316 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
HMGB2-205ENST00000511316 C9orf92A6NGG3 77 aa6.76□□□□□ -1.33
HMGB2-205ENST00000511316 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
HMGB2-205ENST00000511316 ROMO1P60602 79 aa6.64□□□□□ -1.35
HMGB2-205ENST00000511316 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
HMGB2-205ENST00000511316 XP32Q5T750 250 aa6.62□□□□□ -1.35
HMGB2-205ENST00000511316 KRTAP4-1Q9BYQ7 146 aa6.61□□□□□ -1.35
HMGB2-205ENST00000511316 S4R3F8 94 aa6.55□□□□□ -1.36
HMGB2-205ENST00000511316 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
HMGB2-205ENST00000511316 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
HMGB2-205ENST00000511316 SEC61BP60468 96 aaKnown RBP6.49□□□□□ -1.37
HMGB2-205ENST00000511316 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
HMGB2-205ENST00000511316 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.38
HMGB2-205ENST00000511316 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.38
HMGB2-205ENST00000511316 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
HMGB2-205ENST00000511316 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
HMGB2-205ENST00000511316 CRIPTQ9P021 101 aa6.41□□□□□ -1.38
HMGB2-205ENST00000511316 M0QZ58 72 aa6.41□□□□□ -1.38
HMGB2-205ENST00000511316 KRTAP13-4Q3LI77 160 aa6.39□□□□□ -1.39
HMGB2-205ENST00000511316 A0A0D9SG42 100 aa6.38□□□□□ -1.39
HMGB2-205ENST00000511316 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.4
HMGB2-205ENST00000511316 P0C880 135 aa6.32□□□□□ -1.4
HMGB2-205ENST00000511316 FLGP20930 4061 aaPredicted RBP6.29□□□□□ -1.4
HMGB2-205ENST00000511316 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
HMGB2-205ENST00000511316 MT1HP80294 61 aa6.26□□□□□ -1.41
HMGB2-205ENST00000511316 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
HMGB2-205ENST00000511316 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
HMGB2-205ENST00000511316 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
HMGB2-205ENST00000511316 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
HMGB2-205ENST00000511316 KRTAP9-2Q9BYQ4 174 aa6.12□□□□□ -1.43
HMGB2-205ENST00000511316 R4GN34 69 aa6.09□□□□□ -1.43
HMGB2-205ENST00000511316 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.44
HMGB2-205ENST00000511316 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
HMGB2-205ENST00000511316 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
HMGB2-205ENST00000511316 M0R2T5 61 aa6□□□□□ -1.45
HMGB2-205ENST00000511316 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
HMGB2-205ENST00000511316 LUZP6Q538Z0 58 aa5.92□□□□□ -1.46
HMGB2-205ENST00000511316 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
HMGB2-205ENST00000511316 MT2AP02795 61 aa5.87□□□□□ -1.47
HMGB2-205ENST00000511316 USH2AO75445 5202 aa5.86□□□□□ -1.47
HMGB2-205ENST00000511316 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
HMGB2-205ENST00000511316 MT1FP04733 61 aa5.84□□□□□ -1.47
HMGB2-205ENST00000511316 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
HMGB2-205ENST00000511316 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
HMGB2-205ENST00000511316 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
HMGB2-205ENST00000511316 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
HMGB2-205ENST00000511316 SSPOA2VEC9 5147 aa5.8□□□□□ -1.48
HMGB2-205ENST00000511316 LCE2BO14633 110 aa5.74□□□□□ -1.49
HMGB2-205ENST00000511316 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
HMGB2-205ENST00000511316 TNP1P09430 55 aa5.67□□□□□ -1.5
HMGB2-205ENST00000511316 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
HMGB2-205ENST00000511316 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
HMGB2-205ENST00000511316 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
HMGB2-205ENST00000511316 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
HMGB2-205ENST00000511316 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.53
HMGB2-205ENST00000511316 MT1BP07438 61 aa5.41□□□□□ -1.54
HMGB2-205ENST00000511316 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
HMGB2-205ENST00000511316 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.54
HMGB2-205ENST00000511316 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
HMGB2-205ENST00000511316 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
HMGB2-205ENST00000511316 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
HMGB2-205ENST00000511316 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
HMGB2-205ENST00000511316 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
HMGB2-205ENST00000511316 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
HMGB2-205ENST00000511316 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
HMGB2-205ENST00000511316 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
HMGB2-205ENST00000511316 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
HMGB2-205ENST00000511316 INE1O15225 51 aa5.13□□□□□ -1.59
HMGB2-205ENST00000511316 KMT2DO14686 5537 aa5.12□□□□□ -1.59
HMGB2-205ENST00000511316 MT1XP80297 61 aa5.11□□□□□ -1.59
HMGB2-205ENST00000511316 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
HMGB2-205ENST00000511316 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.59
HMGB2-205ENST00000511316 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
HMGB2-205ENST00000511316 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms