RNA–Protein interactions for RNA: ENST00000509990.5

MATR3-237, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-237ENST00000509990 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
MATR3-237ENST00000509990 Q5VSD8 79 aa6.65□□□□□ -1.34
MATR3-237ENST00000509990 KRTAP21-3Q3LHN1 58 aa6.64□□□□□ -1.35
MATR3-237ENST00000509990 LRP2P98164 4655 aa6.62□□□□□ -1.35
MATR3-237ENST00000509990 TNXBP22105 4242 aa6.62□□□□□ -1.35
MATR3-237ENST00000509990 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
MATR3-237ENST00000509990 ABCA13Q86UQ4 5058 aa6.6□□□□□ -1.35
MATR3-237ENST00000509990 A8MUU9 505 aa6.52□□□□□ -1.37
MATR3-237ENST00000509990 C20orf166-AS1Q96NR2 134 aa6.51□□□□□ -1.37
MATR3-237ENST00000509990 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
MATR3-237ENST00000509990 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
MATR3-237ENST00000509990 ROMO1P60602 79 aa6.48□□□□□ -1.37
MATR3-237ENST00000509990 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
MATR3-237ENST00000509990 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
MATR3-237ENST00000509990 MUC2Q02817 5179 aa6.44□□□□□ -1.38
MATR3-237ENST00000509990 LCE2DQ5TA82 110 aaPredicted RBP6.42□□□□□ -1.38
MATR3-237ENST00000509990 H0YAA0 97 aa6.42□□□□□ -1.38
MATR3-237ENST00000509990 XP32Q5T750 250 aa6.4□□□□□ -1.38
MATR3-237ENST00000509990 SPINT4Q6UDR6 99 aa6.4□□□□□ -1.39
MATR3-237ENST00000509990 A0A1B0GU33 70 aa6.38□□□□□ -1.39
MATR3-237ENST00000509990 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
MATR3-237ENST00000509990 A0A0D9SG42 100 aa6.35□□□□□ -1.39
MATR3-237ENST00000509990 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
MATR3-237ENST00000509990 K7ERS5 55 aa6.34□□□□□ -1.39
MATR3-237ENST00000509990 P0C880 135 aa6.33□□□□□ -1.4
MATR3-237ENST00000509990 LUZP6Q538Z0 58 aa6.33□□□□□ -1.4
MATR3-237ENST00000509990 RPL37P61927 97 aaKnown RBP6.31□□□□□ -1.4
MATR3-237ENST00000509990 HERC2O95714 4834 aa6.29□□□□□ -1.4
MATR3-237ENST00000509990 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
MATR3-237ENST00000509990 NDUFAF8A1L188 74 aa6.26□□□□□ -1.41
MATR3-237ENST00000509990 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
MATR3-237ENST00000509990 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
MATR3-237ENST00000509990 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
MATR3-237ENST00000509990 HERC1Q15751 4861 aa6.21□□□□□ -1.41
MATR3-237ENST00000509990 S4R3F8 94 aa6.2□□□□□ -1.42
MATR3-237ENST00000509990 KRTAP10-6P60371 365 aaPredicted RBP6.18□□□□□ -1.42
MATR3-237ENST00000509990 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
MATR3-237ENST00000509990 FAT4Q6V0I7 4981 aa6.11□□□□□ -1.43
MATR3-237ENST00000509990 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
MATR3-237ENST00000509990 PCLOQ9Y6V0 5065 aa6.08□□□□□ -1.44
MATR3-237ENST00000509990 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
MATR3-237ENST00000509990 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
MATR3-237ENST00000509990 KRTAP12-2P59991 146 aa6□□□□□ -1.45
MATR3-237ENST00000509990 MUC17Q685J3 4493 aa6□□□□□ -1.45
MATR3-237ENST00000509990 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
MATR3-237ENST00000509990 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
MATR3-237ENST00000509990 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
MATR3-237ENST00000509990 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
MATR3-237ENST00000509990 M0QZ58 72 aa5.9□□□□□ -1.47
MATR3-237ENST00000509990 BIRC6Q9NR09 4857 aa5.89□□□□□ -1.47
MATR3-237ENST00000509990 KRTAP12-1P59990 96 aa5.86□□□□□ -1.47
MATR3-237ENST00000509990 R4GN34 69 aa5.83□□□□□ -1.48
MATR3-237ENST00000509990 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
MATR3-237ENST00000509990 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
MATR3-237ENST00000509990 KRTAP19-2Q3LHN2 52 aa5.71□□□□□ -1.5
MATR3-237ENST00000509990 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
MATR3-237ENST00000509990 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
MATR3-237ENST00000509990 M0R2T5 61 aa5.59□□□□□ -1.51
MATR3-237ENST00000509990 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
MATR3-237ENST00000509990 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
MATR3-237ENST00000509990 LCE2BO14633 110 aa5.47□□□□□ -1.53
MATR3-237ENST00000509990 USH2AO75445 5202 aa5.44□□□□□ -1.54
MATR3-237ENST00000509990 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
MATR3-237ENST00000509990 MT1HP80294 61 aa5.36□□□□□ -1.55
MATR3-237ENST00000509990 MT1FP04733 61 aa5.32□□□□□ -1.56
MATR3-237ENST00000509990 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
MATR3-237ENST00000509990 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
MATR3-237ENST00000509990 MT2AP02795 61 aa5.25□□□□□ -1.57
MATR3-237ENST00000509990 KMT2DO14686 5537 aa5.25□□□□□ -1.57
MATR3-237ENST00000509990 KRTAP9-8Q9BYQ0 159 aa5.2□□□□□ -1.58
MATR3-237ENST00000509990 TNP1P09430 55 aa5.18□□□□□ -1.58
MATR3-237ENST00000509990 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
MATR3-237ENST00000509990 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
MATR3-237ENST00000509990 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
MATR3-237ENST00000509990 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
MATR3-237ENST00000509990 MT1BP07438 61 aa5.03□□□□□ -1.6
MATR3-237ENST00000509990 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
MATR3-237ENST00000509990 MT1XP80297 61 aa4.97□□□□□ -1.61
MATR3-237ENST00000509990 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
MATR3-237ENST00000509990 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
MATR3-237ENST00000509990 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
MATR3-237ENST00000509990 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
MATR3-237ENST00000509990 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
MATR3-237ENST00000509990 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
MATR3-237ENST00000509990 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
MATR3-237ENST00000509990 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
MATR3-237ENST00000509990 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
MATR3-237ENST00000509990 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
MATR3-237ENST00000509990 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
MATR3-237ENST00000509990 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
MATR3-237ENST00000509990 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
MATR3-237ENST00000509990 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
MATR3-237ENST00000509990 INE1O15225 51 aa4.64□□□□□ -1.67
MATR3-237ENST00000509990 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
MATR3-237ENST00000509990 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
MATR3-237ENST00000509990 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
MATR3-237ENST00000509990 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
MATR3-237ENST00000509990 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
MATR3-237ENST00000509990 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
MATR3-237ENST00000509990 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms