RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 SEC61GP60059 68 aa11.34□□□□□ -0.59
RNF4-207ENST00000506706 HERC2O95714 4834 aa11.34□□□□□ -0.59
RNF4-207ENST00000506706 LPAP08519 4548 aa11.3□□□□□ -0.6
RNF4-207ENST00000506706 LRP2P98164 4655 aa11.29□□□□□ -0.6
RNF4-207ENST00000506706 UQCR11O14957 56 aa11.24□□□□□ -0.61
RNF4-207ENST00000506706 SEC61BP60468 96 aaKnown RBP11.21□□□□□ -0.61
RNF4-207ENST00000506706 S4R3F8 94 aa11.21□□□□□ -0.61
RNF4-207ENST00000506706 H1FX-AS1Q4G0G2 97 aa11.19□□□□□ -0.62
RNF4-207ENST00000506706 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
RNF4-207ENST00000506706 RBM12B-AS1Q9P1G2 102 aa11.18□□□□□ -0.62
RNF4-207ENST00000506706 SPATA8Q6RVD6 105 aa11.16□□□□□ -0.62
RNF4-207ENST00000506706 MIR22HGQ0VDD5 57 aa11.16□□□□□ -0.62
RNF4-207ENST00000506706 PMAIP1Q13794 54 aa11.08□□□□□ -0.64
RNF4-207ENST00000506706 A0A1B0GU33 70 aa11.05□□□□□ -0.64
RNF4-207ENST00000506706 KRTAP4-1Q9BYQ7 146 aa10.95□□□□□ -0.66
RNF4-207ENST00000506706 H0YAA0 97 aa10.94□□□□□ -0.66
RNF4-207ENST00000506706 A6NN06 94 aa10.94□□□□□ -0.66
RNF4-207ENST00000506706 MUC17Q685J3 4493 aa10.92□□□□□ -0.66
RNF4-207ENST00000506706 KRTAP10-6P60371 365 aaPredicted RBP10.91□□□□□ -0.66
RNF4-207ENST00000506706 CSAG1Q6PB30 78 aa10.91□□□□□ -0.66
RNF4-207ENST00000506706 KRTAP3-2Q9BYR7 98 aa10.89□□□□□ -0.67
RNF4-207ENST00000506706 PCLOQ9Y6V0 5065 aa10.84□□□□□ -0.67
RNF4-207ENST00000506706 ADM2Q7Z4H4 148 aa10.78□□□□□ -0.68
RNF4-207ENST00000506706 P0C880 135 aa10.77□□□□□ -0.69
RNF4-207ENST00000506706 KTN1-AS1Q86SY8 53 aa10.72□□□□□ -0.69
RNF4-207ENST00000506706 KRTAP19-2Q3LHN2 52 aa10.71□□□□□ -0.69
RNF4-207ENST00000506706 HERC1Q15751 4861 aa10.7□□□□□ -0.7
RNF4-207ENST00000506706 KRTAP13-4Q3LI77 160 aa10.69□□□□□ -0.7
RNF4-207ENST00000506706 HMCN2Q8NDA2 5059 aa10.66□□□□□ -0.7
RNF4-207ENST00000506706 K7ERS5 55 aa10.57□□□□□ -0.72
RNF4-207ENST00000506706 A0A0D9SG42 100 aa10.55□□□□□ -0.72
RNF4-207ENST00000506706 M0QZ58 72 aa10.51□□□□□ -0.73
RNF4-207ENST00000506706 MUC2Q02817 5179 aa10.48□□□□□ -0.73
RNF4-207ENST00000506706 FLGP20930 4061 aaPredicted RBP10.44□□□□□ -0.74
RNF4-207ENST00000506706 R4GN34 69 aa10.37□□□□□ -0.75
RNF4-207ENST00000506706 PRAC1Q96KF2 57 aa10.34□□□□□ -0.75
RNF4-207ENST00000506706 KRTAP12-2P59991 146 aa10.3□□□□□ -0.76
RNF4-207ENST00000506706 KRTAP12-1P59990 96 aa10.29□□□□□ -0.76
RNF4-207ENST00000506706 LCE2CQ5TA81 110 aa10.29□□□□□ -0.76
RNF4-207ENST00000506706 LORP23490 312 aaPredicted RBP10.29□□□□□ -0.76
RNF4-207ENST00000506706 SPINT4Q6UDR6 99 aa10.27□□□□□ -0.76
RNF4-207ENST00000506706 LINC01554Q52M75 96 aa10.22□□□□□ -0.77
RNF4-207ENST00000506706 ROMO1P60602 79 aa10.2□□□□□ -0.78
RNF4-207ENST00000506706 RNF213Q63HN8 5207 aa10.16□□□□□ -0.78
RNF4-207ENST00000506706 UBR4Q5T4S7 5183 aa10.13□□□□□ -0.79
RNF4-207ENST00000506706 CRIPTQ9P021 101 aa10.08□□□□□ -0.8
RNF4-207ENST00000506706 MT1HP80294 61 aa10.07□□□□□ -0.8
RNF4-207ENST00000506706 M0R2T5 61 aa10.06□□□□□ -0.8
RNF4-207ENST00000506706 KRTAP25-1Q3LHN0 102 aa9.99□□□□□ -0.81
RNF4-207ENST00000506706 FAT4Q6V0I7 4981 aa9.98□□□□□ -0.81
RNF4-207ENST00000506706 SPRR2GQ9BYE4 73 aa9.78□□□□□ -0.84
RNF4-207ENST00000506706 MT2AP02795 61 aa9.77□□□□□ -0.85
RNF4-207ENST00000506706 CAMK2N1Q7Z7J9 78 aa9.76□□□□□ -0.85
RNF4-207ENST00000506706 KRTAP9-8Q9BYQ0 159 aa9.76□□□□□ -0.85
RNF4-207ENST00000506706 MT1FP04733 61 aa9.73□□□□□ -0.85
RNF4-207ENST00000506706 KRTAP10-10P60014 251 aa9.73□□□□□ -0.85
RNF4-207ENST00000506706 C10orf95Q9H7T3 257 aa9.73□□□□□ -0.85
RNF4-207ENST00000506706 KRTAP19-1Q8IUB9 90 aa9.71□□□□□ -0.86
RNF4-207ENST00000506706 PLAC4Q8WY50 150 aa9.58□□□□□ -0.88
RNF4-207ENST00000506706 H3BS24 57 aa9.57□□□□□ -0.88
RNF4-207ENST00000506706 KRTAP19-8Q3LI54 63 aa9.44□□□□□ -0.9
RNF4-207ENST00000506706 KRTAP9-3Q9BYQ3 159 aa9.38□□□□□ -0.91
RNF4-207ENST00000506706 LCE2AQ5TA79 106 aaPredicted RBP9.35□□□□□ -0.91
RNF4-207ENST00000506706 TNP1P09430 55 aa9.35□□□□□ -0.91
RNF4-207ENST00000506706 MT1BP07438 61 aa9.3□□□□□ -0.92
RNF4-207ENST00000506706 PP632Q6XCG6 107 aa9.28□□□□□ -0.92
RNF4-207ENST00000506706 KRTAP23-1A1A580 65 aa9.15□□□□□ -0.94
RNF4-207ENST00000506706 KRTAP10-5P60370 271 aa9.09□□□□□ -0.95
RNF4-207ENST00000506706 MT1XP80297 61 aa9.09□□□□□ -0.95
RNF4-207ENST00000506706 LCE2BO14633 110 aa9.06□□□□□ -0.96
RNF4-207ENST00000506706 KRTAP15-1Q3LI76 137 aa8.95□□□□□ -0.98
RNF4-207ENST00000506706 PRO2289Q9P1D8 64 aa8.95□□□□□ -0.98
RNF4-207ENST00000506706 LCE3AQ5TA76 89 aa8.88□□□□□ -0.99
RNF4-207ENST00000506706 KRTAP10-7P60409 375 aaPredicted RBP8.77□□□□□ -1.01
RNF4-207ENST00000506706 KRTAP10-12P60413 245 aa8.77□□□□□ -1.01
RNF4-207ENST00000506706 KRTAP8-1Q8IUC2 63 aa8.69□□□□□ -1.02
RNF4-207ENST00000506706 USH2AO75445 5202 aa8.68□□□□□ -1.02
RNF4-207ENST00000506706 KRTAP12-3P60328 96 aa8.51□□□□□ -1.05
RNF4-207ENST00000506706 NDUFAF8A1L188 74 aa8.45□□□□□ -1.06
RNF4-207ENST00000506706 SSPOA2VEC9 5147 aa8.39□□□□□ -1.07
RNF4-207ENST00000506706 SPRR5A0A1B0GTR4 108 aa8.39□□□□□ -1.07
RNF4-207ENST00000506706 KRTAP19-6Q3LI70 58 aa8.39□□□□□ -1.07
RNF4-207ENST00000506706 LUZP6Q538Z0 58 aa8.34□□□□□ -1.07
RNF4-207ENST00000506706 LCE2DQ5TA82 110 aaPredicted RBP8.33□□□□□ -1.08
RNF4-207ENST00000506706 A0A0A0MQY5 61 aa8.33□□□□□ -1.08
RNF4-207ENST00000506706 KRTAP4-8A0A0G2JLE6 195 aa8.33□□□□□ -1.08
RNF4-207ENST00000506706 KRTAP19-5Q3LI72 72 aa8.33□□□□□ -1.08
RNF4-207ENST00000506706 KRTAP4-8Q9BYQ9 185 aa8.33□□□□□ -1.08
RNF4-207ENST00000506706 KMT2DO14686 5537 aa8.24□□□□□ -1.09
RNF4-207ENST00000506706 FSIP2Q5CZC0 6907 aa8.13□□□□□ -1.11
RNF4-207ENST00000506706 KRTAP19-7Q3SYF9 63 aa8.1□□□□□ -1.11
RNF4-207ENST00000506706 LCE3CQ5T5A8 94 aa7.98□□□□□ -1.13
RNF4-207ENST00000506706 MT1EP04732 61 aa7.94□□□□□ -1.14
RNF4-207ENST00000506706 FCGBPQ9Y6R7 5405 aaPredicted RBP7.92□□□□□ -1.14
RNF4-207ENST00000506706 KRTAP19-4Q3LI73 84 aa7.85□□□□□ -1.15
RNF4-207ENST00000506706 MT1LQ93083 61 aa7.84□□□□□ -1.15
RNF4-207ENST00000506706 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
RNF4-207ENST00000506706 KRTAP4-7Q9BYR0 210 aa7.69□□□□□ -1.18
RNF4-207ENST00000506706 CRCT1Q9UGL9 99 aa7.59□□□□□ -1.19
RNF4-207ENST00000506706 KRTAP9-6A8MVA2 160 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms