RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 KLKP1Q107X0 134 aa7.75□□□□□ -1.17
SNCA-209ENST00000506244 SMIM20Q8N5G0 67 aa7.73□□□□□ -1.17
SNCA-209ENST00000506244 NDUFC1O43677 76 aa7.7□□□□□ -1.18
SNCA-209ENST00000506244 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
SNCA-209ENST00000506244 SSPOA2VEC9 5147 aa7.67□□□□□ -1.18
SNCA-209ENST00000506244 TRAV7A0A075B6U4 112 aa7.65□□□□□ -1.18
SNCA-209ENST00000506244 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
SNCA-209ENST00000506244 DMAC1Q96GE9 116 aa7.6□□□□□ -1.19
SNCA-209ENST00000506244 H0YAA0 97 aa7.59□□□□□ -1.19
SNCA-209ENST00000506244 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
SNCA-209ENST00000506244 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
SNCA-209ENST00000506244 SPRR2GQ9BYE4 73 aa7.54□□□□□ -1.2
SNCA-209ENST00000506244 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
SNCA-209ENST00000506244 Q5VV11 94 aa7.48□□□□□ -1.21
SNCA-209ENST00000506244 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
SNCA-209ENST00000506244 SERP2Q8N6R1 65 aa7.47□□□□□ -1.21
SNCA-209ENST00000506244 ACYP2P14621 99 aa7.46□□□□□ -1.22
SNCA-209ENST00000506244 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.45□□□□□ -1.22
SNCA-209ENST00000506244 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
SNCA-209ENST00000506244 SNURFQ9Y675 71 aa7.44□□□□□ -1.22
SNCA-209ENST00000506244 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
SNCA-209ENST00000506244 MT1BP07438 61 aa7.4□□□□□ -1.22
SNCA-209ENST00000506244 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.22
SNCA-209ENST00000506244 SPANXA2-OT1Q8N9U9 137 aa7.38□□□□□ -1.23
SNCA-209ENST00000506244 CHKB-CPT1BH3BT56 60 aa7.36□□□□□ -1.23
SNCA-209ENST00000506244 A6NN06 94 aa7.31□□□□□ -1.24
SNCA-209ENST00000506244 KRTAP9-7A8MTY7 169 aa7.31□□□□□ -1.24
SNCA-209ENST00000506244 R4GN34 69 aa7.31□□□□□ -1.24
SNCA-209ENST00000506244 P0C880 135 aa7.28□□□□□ -1.24
SNCA-209ENST00000506244 COX7CP15954 63 aa7.28□□□□□ -1.24
SNCA-209ENST00000506244 M0QZ58 72 aa7.23□□□□□ -1.25
SNCA-209ENST00000506244 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
SNCA-209ENST00000506244 MACF1Q9UPN3 7388 aaKnown RBP7.22□□□□□ -1.25
SNCA-209ENST00000506244 KRTAP10-5P60370 271 aa7.22□□□□□ -1.25
SNCA-209ENST00000506244 PLAC4Q8WY50 150 aa7.17□□□□□ -1.26
SNCA-209ENST00000506244 COA5Q86WW8 74 aa7.14□□□□□ -1.27
SNCA-209ENST00000506244 ANAPC13Q9BS18 74 aa7.14□□□□□ -1.27
SNCA-209ENST00000506244 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
SNCA-209ENST00000506244 SYNE2Q8WXH0 6885 aaKnown RBP7.12□□□□□ -1.27
SNCA-209ENST00000506244 H7BZZ5 65 aa7.11□□□□□ -1.27
SNCA-209ENST00000506244 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
SNCA-209ENST00000506244 CYSTM1Q9H1C7 97 aa7.06□□□□□ -1.28
SNCA-209ENST00000506244 KRTAP6-3Q3LI67 103 aa7.05□□□□□ -1.28
SNCA-209ENST00000506244 SEC61GP60059 68 aa7.01□□□□□ -1.29
SNCA-209ENST00000506244 MT1XP80297 61 aa6.99□□□□□ -1.29
SNCA-209ENST00000506244 SERP1Q9Y6X1 66 aa6.97□□□□□ -1.29
SNCA-209ENST00000506244 CCDC179H3BU77 68 aa6.93□□□□□ -1.3
SNCA-209ENST00000506244 ATP5EP56381 51 aaPredicted RBP6.92□□□□□ -1.3
SNCA-209ENST00000506244 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
SNCA-209ENST00000506244 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
SNCA-209ENST00000506244 A0A1B0GU33 70 aa6.8□□□□□ -1.32
SNCA-209ENST00000506244 KRTAP5-9P26371 169 aa6.8□□□□□ -1.32
SNCA-209ENST00000506244 A0A1B0GU69 56 aa6.79□□□□□ -1.32
SNCA-209ENST00000506244 TMEM258P61165 79 aa6.77□□□□□ -1.33
SNCA-209ENST00000506244 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
SNCA-209ENST00000506244 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
SNCA-209ENST00000506244 KMT2DO14686 5537 aa6.73□□□□□ -1.33
SNCA-209ENST00000506244 A0A0D9SG42 100 aa6.73□□□□□ -1.33
SNCA-209ENST00000506244 SPATA8Q6RVD6 105 aa6.72□□□□□ -1.33
SNCA-209ENST00000506244 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
SNCA-209ENST00000506244 NEBP20929 6669 aa6.71□□□□□ -1.34
SNCA-209ENST00000506244 PRR15LQ9BU68 103 aa6.7□□□□□ -1.34
SNCA-209ENST00000506244 SMIM26A0A096LP01 95 aa6.66□□□□□ -1.34
SNCA-209ENST00000506244 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
SNCA-209ENST00000506244 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
SNCA-209ENST00000506244 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
SNCA-209ENST00000506244 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
SNCA-209ENST00000506244 MDN1Q9NU22 5596 aa6.6□□□□□ -1.35
SNCA-209ENST00000506244 LINC01558Q9Y6Z2 57 aa6.6□□□□□ -1.35
SNCA-209ENST00000506244 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
SNCA-209ENST00000506244 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
SNCA-209ENST00000506244 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
SNCA-209ENST00000506244 SPRR2EP22531 72 aa6.52□□□□□ -1.37
SNCA-209ENST00000506244 SPRR2BP35325 72 aa6.52□□□□□ -1.37
SNCA-209ENST00000506244 SPRR2AP35326 72 aa6.52□□□□□ -1.37
SNCA-209ENST00000506244 A8MU10 97 aa6.5□□□□□ -1.37
SNCA-209ENST00000506244 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
SNCA-209ENST00000506244 KRTAP20-1Q3LI63 56 aa6.45□□□□□ -1.38
SNCA-209ENST00000506244 UQCR11O14957 56 aa6.44□□□□□ -1.38
SNCA-209ENST00000506244 LCE1AQ5T7P2 110 aa6.43□□□□□ -1.38
SNCA-209ENST00000506244 V9GYY9 64 aa6.39□□□□□ -1.39
SNCA-209ENST00000506244 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
SNCA-209ENST00000506244 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
SNCA-209ENST00000506244 SPRR2DP22532 72 aa6.31□□□□□ -1.4
SNCA-209ENST00000506244 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
SNCA-209ENST00000506244 Q1T7F1 81 aa6.29□□□□□ -1.4
SNCA-209ENST00000506244 TNP1P09430 55 aa6.28□□□□□ -1.4
SNCA-209ENST00000506244 PSPHP1O15172 72 aa6.25□□□□□ -1.41
SNCA-209ENST00000506244 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
SNCA-209ENST00000506244 KRTAP19-7Q3SYF9 63 aa6.24□□□□□ -1.41
SNCA-209ENST00000506244 PCP4P48539 62 aa6.22□□□□□ -1.41
SNCA-209ENST00000506244 K7ERS5 55 aa6.21□□□□□ -1.42
SNCA-209ENST00000506244 MT1EP04732 61 aa6.2□□□□□ -1.42
SNCA-209ENST00000506244 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
SNCA-209ENST00000506244 KRTAP19-5Q3LI72 72 aa6.14□□□□□ -1.43
SNCA-209ENST00000506244 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
SNCA-209ENST00000506244 KRTAP2-2Q9BYT5 123 aa6.13□□□□□ -1.43
SNCA-209ENST00000506244 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
SNCA-209ENST00000506244 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
SNCA-209ENST00000506244 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms