RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 LINC00483Q53H64 154 aa2.41□□□□□ -2.02
RFC1-208ENST00000504849 LCA10Q71F78 164 aa2.41□□□□□ -2.02
RFC1-208ENST00000504849 UBE2DNLQ8IWF7 75 aa2.41□□□□□ -2.02
RFC1-208ENST00000504849 MRPL34Q9BQ48 92 aaKnown RBP2.41□□□□□ -2.02
RFC1-208ENST00000504849 PLAC8Q9NZF1 115 aa2.41□□□□□ -2.02
RFC1-208ENST00000504849 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
RFC1-208ENST00000504849 STAB2Q8WWQ8 2551 aa2.41□□□□□ -2.02
RFC1-208ENST00000504849 SPAG11AQ6PDA7 123 aa2.4□□□□□ -2.03
RFC1-208ENST00000504849 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.03
RFC1-208ENST00000504849 ACYP2P14621 99 aa2.39□□□□□ -2.03
RFC1-208ENST00000504849 HRES1P13985 223 aa2.38□□□□□ -2.03
RFC1-208ENST00000504849 SPINT4Q6UDR6 99 aa2.38□□□□□ -2.03
RFC1-208ENST00000504849 LYSTQ99698 3801 aa2.38□□□□□ -2.03
RFC1-208ENST00000504849 A8MU10 97 aa2.37□□□□□ -2.03
RFC1-208ENST00000504849 KRTAP13-1Q8IUC0 172 aa2.37□□□□□ -2.03
RFC1-208ENST00000504849 Q96NJ1 140 aa2.37□□□□□ -2.03
RFC1-208ENST00000504849 A0A1B0GU69 56 aa2.36□□□□□ -2.03
RFC1-208ENST00000504849 SPINK7P58062 85 aa2.36□□□□□ -2.03
RFC1-208ENST00000504849 CSMD3Q7Z407 3707 aa2.35□□□□□ -2.03
RFC1-208ENST00000504849 A0A1B0GU33 70 aa2.35□□□□□ -2.03
RFC1-208ENST00000504849 DMAC1Q96GE9 116 aa2.35□□□□□ -2.03
RFC1-208ENST00000504849 HECTD4Q9Y4D8 3996 aa2.35□□□□□ -2.03
RFC1-208ENST00000504849 KRTAP11-1Q8IUC1 163 aa2.34□□□□□ -2.03
RFC1-208ENST00000504849 SPACA4Q8TDM5 124 aa2.34□□□□□ -2.03
RFC1-208ENST00000504849 NBDYA0A0U1RRE5 68 aa2.33□□□□□ -2.04
RFC1-208ENST00000504849 UQCR11O14957 56 aa2.33□□□□□ -2.04
RFC1-208ENST00000504849 MIR22HGQ0VDD5 57 aa2.33□□□□□ -2.04
RFC1-208ENST00000504849 SPATA8Q6RVD6 105 aa2.33□□□□□ -2.04
RFC1-208ENST00000504849 APLNQ9ULZ1 77 aa2.33□□□□□ -2.04
RFC1-208ENST00000504849 FRAS1Q86XX4 4008 aa2.33□□□□□ -2.04
RFC1-208ENST00000504849 NUPR2A6NF83 97 aa2.32□□□□□ -2.04
RFC1-208ENST00000504849 K7EIL1 84 aa2.32□□□□□ -2.04
RFC1-208ENST00000504849 SPINK6Q6UWN8 80 aa2.32□□□□□ -2.04
RFC1-208ENST00000504849 SSBP3-AS1Q7Z2R9 100 aa2.32□□□□□ -2.04
RFC1-208ENST00000504849 RETNLBQ9BQ08 111 aa2.32□□□□□ -2.04
RFC1-208ENST00000504849 DNAH9Q9NYC9 4486 aa2.31□□□□□ -2.04
RFC1-208ENST00000504849 LINC01554Q52M75 96 aa2.31□□□□□ -2.04
RFC1-208ENST00000504849 PSORS1C2Q9UIG4 136 aa2.3□□□□□ -2.04
RFC1-208ENST00000504849 A0A087WTM6 91 aa2.29□□□□□ -2.04
RFC1-208ENST00000504849 KRTAP25-1Q3LHN0 102 aa2.29□□□□□ -2.04
RFC1-208ENST00000504849 Q6ZRN7 208 aaPredicted RBP2.29□□□□□ -2.04
RFC1-208ENST00000504849 R4GN34 69 aa2.28□□□□□ -2.04
RFC1-208ENST00000504849 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
RFC1-208ENST00000504849 PLECQ15149 4684 aaKnown RBP2.25□□□□□ -2.05
RFC1-208ENST00000504849 MUC2Q02817 5179 aa2.25□□□□□ -2.05
RFC1-208ENST00000504849 DMBT1Q9UGM3 2413 aaPredicted RBP2.25□□□□□ -2.05
RFC1-208ENST00000504849 DNAH3Q8TD57 4116 aa2.24□□□□□ -2.05
RFC1-208ENST00000504849 LY6G6CO95867 125 aa2.24□□□□□ -2.05
RFC1-208ENST00000504849 SRRM2Q9UQ35 2752 aaKnown RBP2.24□□□□□ -2.05
RFC1-208ENST00000504849 C1orf134Q5TEV5 83 aa2.23□□□□□ -2.05
RFC1-208ENST00000504849 CSAG1Q6PB30 78 aa2.23□□□□□ -2.05
RFC1-208ENST00000504849 DNAH10Q8IVF4 4471 aa2.23□□□□□ -2.05
RFC1-208ENST00000504849 KMT2AQ03164 3969 aa2.21□□□□□ -2.06
RFC1-208ENST00000504849 STARD9Q9P2P6 4700 aa2.21□□□□□ -2.06
RFC1-208ENST00000504849 SPINK1P00995 79 aa2.21□□□□□ -2.06
RFC1-208ENST00000504849 RPS29P62273 56 aaKnown RBP2.2□□□□□ -2.06
RFC1-208ENST00000504849 KRTAP13-2Q52LG2 175 aa2.2□□□□□ -2.06
RFC1-208ENST00000504849 RNF213Q63HN8 5207 aa2.2□□□□□ -2.06
RFC1-208ENST00000504849 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
RFC1-208ENST00000504849 HUWE1Q7Z6Z7 4374 aaKnown RBP2.19□□□□□ -2.06
RFC1-208ENST00000504849 H1FX-AS1Q4G0G2 97 aa2.18□□□□□ -2.06
RFC1-208ENST00000504849 ALMS1Q8TCU4 4167 aa2.18□□□□□ -2.06
RFC1-208ENST00000504849 HMCN2Q8NDA2 5059 aa2.17□□□□□ -2.06
RFC1-208ENST00000504849 PKHD1P08F94 4074 aa2.17□□□□□ -2.06
RFC1-208ENST00000504849 DYNC1H1Q14204 4646 aaKnown RBP2.17□□□□□ -2.06
RFC1-208ENST00000504849 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
RFC1-208ENST00000504849 HSPG2P98160 4391 aa2.16□□□□□ -2.06
RFC1-208ENST00000504849 H0YAA0 97 aa2.16□□□□□ -2.06
RFC1-208ENST00000504849 Q6ZSA8 131 aa2.16□□□□□ -2.06
RFC1-208ENST00000504849 FLG2Q5D862 2391 aaPredicted RBP2.15□□□□□ -2.06
RFC1-208ENST00000504849 ROMO1P60602 79 aa2.15□□□□□ -2.07
RFC1-208ENST00000504849 PP632Q6XCG6 107 aa2.15□□□□□ -2.07
RFC1-208ENST00000504849 LINC00304Q8N9R0 145 aa2.15□□□□□ -2.07
RFC1-208ENST00000504849 DNAH11Q96DT5 4516 aa2.14□□□□□ -2.07
RFC1-208ENST00000504849 FAT2Q9NYQ8 4349 aa2.13□□□□□ -2.07
RFC1-208ENST00000504849 MYCBP2O75592 4640 aa2.13□□□□□ -2.07
RFC1-208ENST00000504849 C20orf166-AS1Q96NR2 134 aa2.13□□□□□ -2.07
RFC1-208ENST00000504849 PRO2289Q9P1D8 64 aa2.13□□□□□ -2.07
RFC1-208ENST00000504849 COX6B2Q6YFQ2 88 aa2.12□□□□□ -2.07
RFC1-208ENST00000504849 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
RFC1-208ENST00000504849 CRCT1Q9UGL9 99 aa2.12□□□□□ -2.07
RFC1-208ENST00000504849 RPL37P61927 97 aaKnown RBP2.11□□□□□ -2.07
RFC1-208ENST00000504849 APOBP04114 4563 aaKnown RBP2.1□□□□□ -2.07
RFC1-208ENST00000504849 DNAH8Q96JB1 4490 aa2.1□□□□□ -2.07
RFC1-208ENST00000504849 DNAH17Q9UFH2 4485 aa2.1□□□□□ -2.07
RFC1-208ENST00000504849 VPS13DQ5THJ4 4388 aa2.1□□□□□ -2.07
RFC1-208ENST00000504849 C9orf92A6NGG3 77 aa2.08□□□□□ -2.08
RFC1-208ENST00000504849 FSIP2Q5CZC0 6907 aa2.08□□□□□ -2.08
RFC1-208ENST00000504849 PKD1P98161 4303 aa2.07□□□□□ -2.08
RFC1-208ENST00000504849 DNAH2Q9P225 4427 aa2.06□□□□□ -2.08
RFC1-208ENST00000504849 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
RFC1-208ENST00000504849 FAT1Q14517 4588 aa2.05□□□□□ -2.08
RFC1-208ENST00000504849 S4R3F8 94 aa2.05□□□□□ -2.08
RFC1-208ENST00000504849 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
RFC1-208ENST00000504849 LRP2P98164 4655 aa2.04□□□□□ -2.08
RFC1-208ENST00000504849 DNAH6Q9C0G6 4158 aa2.04□□□□□ -2.08
RFC1-208ENST00000504849 A0A0D9SG42 100 aa2.03□□□□□ -2.08
RFC1-208ENST00000504849 LRP1BQ9NZR2 4599 aa2.02□□□□□ -2.09
RFC1-208ENST00000504849 P0C880 135 aa2.02□□□□□ -2.09
RFC1-208ENST00000504849 TPRXLQ17RH7 258 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms