RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 FAT3Q8TDW7 4589 aa12.15□□□□□ -0.46
SNF8-202ENST00000502492 COX6B2Q6YFQ2 88 aa12.14□□□□□ -0.47
SNF8-202ENST00000502492 MYCBP2O75592 4640 aa12.13□□□□□ -0.47
SNF8-202ENST00000502492 ABCA13Q86UQ4 5058 aa12.11□□□□□ -0.47
SNF8-202ENST00000502492 A0A1B0GU33 70 aa12.11□□□□□ -0.47
SNF8-202ENST00000502492 KRTAP10-8P60410 259 aa12.07□□□□□ -0.48
SNF8-202ENST00000502492 H1FX-AS1Q4G0G2 97 aa12.07□□□□□ -0.48
SNF8-202ENST00000502492 TNXBP22105 4242 aa12.06□□□□□ -0.48
SNF8-202ENST00000502492 MT1HL1P0DM35 61 aa12□□□□□ -0.49
SNF8-202ENST00000502492 CSAG1Q6PB30 78 aa11.93□□□□□ -0.5
SNF8-202ENST00000502492 LINC01554Q52M75 96 aa11.92□□□□□ -0.5
SNF8-202ENST00000502492 RPL37P61927 97 aaKnown RBP11.91□□□□□ -0.5
SNF8-202ENST00000502492 XP32Q5T750 250 aa11.84□□□□□ -0.51
SNF8-202ENST00000502492 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
SNF8-202ENST00000502492 DMBT1Q9UGM3 2413 aaPredicted RBP11.83□□□□□ -0.52
SNF8-202ENST00000502492 PCLOQ9Y6V0 5065 aa11.82□□□□□ -0.52
SNF8-202ENST00000502492 J3QL48 77 aa11.8□□□□□ -0.52
SNF8-202ENST00000502492 KRTAP10-6P60371 365 aaPredicted RBP11.76□□□□□ -0.53
SNF8-202ENST00000502492 K7ERS5 55 aa11.7□□□□□ -0.54
SNF8-202ENST00000502492 S4R3F8 94 aa11.69□□□□□ -0.54
SNF8-202ENST00000502492 KRTAP3-2Q9BYR7 98 aa11.68□□□□□ -0.54
SNF8-202ENST00000502492 KRTAP25-1Q3LHN0 102 aa11.64□□□□□ -0.55
SNF8-202ENST00000502492 KRTAP13-4Q3LI77 160 aa11.61□□□□□ -0.55
SNF8-202ENST00000502492 HERC1Q15751 4861 aa11.49□□□□□ -0.57
SNF8-202ENST00000502492 P0C880 135 aa11.48□□□□□ -0.57
SNF8-202ENST00000502492 ROMO1P60602 79 aa11.47□□□□□ -0.57
SNF8-202ENST00000502492 A0A0D9SG42 100 aa11.46□□□□□ -0.57
SNF8-202ENST00000502492 TPRXLQ17RH7 258 aa11.4□□□□□ -0.59
SNF8-202ENST00000502492 CRIPTQ9P021 101 aa11.39□□□□□ -0.59
SNF8-202ENST00000502492 LPAP08519 4548 aa11.31□□□□□ -0.6
SNF8-202ENST00000502492 HMCN2Q8NDA2 5059 aa11.29□□□□□ -0.6
SNF8-202ENST00000502492 LRP2P98164 4655 aa11.28□□□□□ -0.6
SNF8-202ENST00000502492 KRTAP12-2P59991 146 aa11.23□□□□□ -0.61
SNF8-202ENST00000502492 KRTAP12-1P59990 96 aa11.17□□□□□ -0.62
SNF8-202ENST00000502492 M0QZ58 72 aa11.15□□□□□ -0.62
SNF8-202ENST00000502492 SPINT4Q6UDR6 99 aa11.08□□□□□ -0.64
SNF8-202ENST00000502492 C10orf95Q9H7T3 257 aa11.02□□□□□ -0.65
SNF8-202ENST00000502492 SEC61BP60468 96 aaKnown RBP10.97□□□□□ -0.65
SNF8-202ENST00000502492 MUC17Q685J3 4493 aa10.93□□□□□ -0.66
SNF8-202ENST00000502492 R4GN34 69 aa10.83□□□□□ -0.68
SNF8-202ENST00000502492 KRTAP4-1Q9BYQ7 146 aa10.81□□□□□ -0.68
SNF8-202ENST00000502492 UBR4Q5T4S7 5183 aa10.81□□□□□ -0.68
SNF8-202ENST00000502492 H3BS24 57 aa10.79□□□□□ -0.68
SNF8-202ENST00000502492 LORP23490 312 aaPredicted RBP10.72□□□□□ -0.69
SNF8-202ENST00000502492 MUC2Q02817 5179 aa10.69□□□□□ -0.7
SNF8-202ENST00000502492 KRTAP19-2Q3LHN2 52 aa10.68□□□□□ -0.7
SNF8-202ENST00000502492 RNF213Q63HN8 5207 aa10.65□□□□□ -0.7
SNF8-202ENST00000502492 KRTAP15-1Q3LI76 137 aa10.64□□□□□ -0.71
SNF8-202ENST00000502492 FLGP20930 4061 aaPredicted RBP10.32□□□□□ -0.76
SNF8-202ENST00000502492 LCE2CQ5TA81 110 aa10.32□□□□□ -0.76
SNF8-202ENST00000502492 NDUFAF8A1L188 74 aa10.3□□□□□ -0.76
SNF8-202ENST00000502492 FAT4Q6V0I7 4981 aa10.29□□□□□ -0.76
SNF8-202ENST00000502492 CAMK2N1Q7Z7J9 78 aa10.27□□□□□ -0.77
SNF8-202ENST00000502492 PP632Q6XCG6 107 aa10.18□□□□□ -0.78
SNF8-202ENST00000502492 PLAC4Q8WY50 150 aa10.16□□□□□ -0.78
SNF8-202ENST00000502492 MT1HP80294 61 aa10.12□□□□□ -0.79
SNF8-202ENST00000502492 M0R2T5 61 aa10□□□□□ -0.81
SNF8-202ENST00000502492 LCE2AQ5TA79 106 aaPredicted RBP9.94□□□□□ -0.82
SNF8-202ENST00000502492 TNP1P09430 55 aa9.92□□□□□ -0.82
SNF8-202ENST00000502492 KRTAP23-1A1A580 65 aa9.89□□□□□ -0.83
SNF8-202ENST00000502492 SPRR2GQ9BYE4 73 aa9.87□□□□□ -0.83
SNF8-202ENST00000502492 KRTAP19-1Q8IUB9 90 aa9.79□□□□□ -0.84
SNF8-202ENST00000502492 KRTAP9-8Q9BYQ0 159 aa9.71□□□□□ -0.85
SNF8-202ENST00000502492 MT2AP02795 61 aa9.66□□□□□ -0.86
SNF8-202ENST00000502492 LUZP6Q538Z0 58 aa9.66□□□□□ -0.86
SNF8-202ENST00000502492 MT1FP04733 61 aa9.6□□□□□ -0.87
SNF8-202ENST00000502492 KRTAP10-10P60014 251 aa9.56□□□□□ -0.88
SNF8-202ENST00000502492 SPRR5A0A1B0GTR4 108 aa9.53□□□□□ -0.88
SNF8-202ENST00000502492 KRTAP19-8Q3LI54 63 aa9.43□□□□□ -0.9
SNF8-202ENST00000502492 LCE3AQ5TA76 89 aa9.39□□□□□ -0.91
SNF8-202ENST00000502492 KRTAP9-3Q9BYQ3 159 aa9.37□□□□□ -0.91
SNF8-202ENST00000502492 MT1BP07438 61 aa9.28□□□□□ -0.92
SNF8-202ENST00000502492 KRTAP10-5P60370 271 aa9.23□□□□□ -0.93
SNF8-202ENST00000502492 MT1XP80297 61 aa9.22□□□□□ -0.93
SNF8-202ENST00000502492 KRTAP8-1Q8IUC2 63 aa9.22□□□□□ -0.93
SNF8-202ENST00000502492 A0A0A0MQY5 61 aa9.17□□□□□ -0.94
SNF8-202ENST00000502492 LCE2BO14633 110 aa9.16□□□□□ -0.94
SNF8-202ENST00000502492 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
SNF8-202ENST00000502492 KRTAP10-12P60413 245 aa9.03□□□□□ -0.96
SNF8-202ENST00000502492 USH2AO75445 5202 aa9.01□□□□□ -0.97
SNF8-202ENST00000502492 KRTAP12-3P60328 96 aa8.96□□□□□ -0.97
SNF8-202ENST00000502492 KRTAP10-7P60409 375 aaPredicted RBP8.94□□□□□ -0.98
SNF8-202ENST00000502492 KRTAP9-2Q9BYQ4 174 aa8.93□□□□□ -0.98
SNF8-202ENST00000502492 PRO2289Q9P1D8 64 aa8.86□□□□□ -0.99
SNF8-202ENST00000502492 FSIP2Q5CZC0 6907 aa8.85□□□□□ -0.99
SNF8-202ENST00000502492 SSPOA2VEC9 5147 aa8.78□□□□□ -1
SNF8-202ENST00000502492 KRTAP19-6Q3LI70 58 aa8.66□□□□□ -1.02
SNF8-202ENST00000502492 KRTAP19-5Q3LI72 72 aa8.57□□□□□ -1.04
SNF8-202ENST00000502492 CRCT1Q9UGL9 99 aa8.57□□□□□ -1.04
SNF8-202ENST00000502492 LCE3CQ5T5A8 94 aa8.46□□□□□ -1.06
SNF8-202ENST00000502492 FCGBPQ9Y6R7 5405 aaPredicted RBP8.45□□□□□ -1.06
SNF8-202ENST00000502492 INE1O15225 51 aa8.36□□□□□ -1.07
SNF8-202ENST00000502492 KRTAP4-8A0A0G2JLE6 195 aa8.36□□□□□ -1.07
SNF8-202ENST00000502492 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
SNF8-202ENST00000502492 KMT2DO14686 5537 aa8.35□□□□□ -1.07
SNF8-202ENST00000502492 KRTAP9-6A0A140TA67 174 aa8.33□□□□□ -1.08
SNF8-202ENST00000502492 KRTAP19-7Q3SYF9 63 aa8.22□□□□□ -1.09
SNF8-202ENST00000502492 KRTAP9-6A8MVA2 160 aa8.14□□□□□ -1.11
SNF8-202ENST00000502492 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
SNF8-202ENST00000502492 KRTAP19-4Q3LI73 84 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms