RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 SMR3BP02814 79 aaPredicted RBP4.88□□□□□ -1.63
FN1-227ENST00000498719 SPINK1P00995 79 aa4.86□□□□□ -1.63
FN1-227ENST00000498719 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.63
FN1-227ENST00000498719 LINC00304Q8N9R0 145 aa4.84□□□□□ -1.64
FN1-227ENST00000498719 A0A1B0GU69 56 aa4.82□□□□□ -1.64
FN1-227ENST00000498719 PKHD1L1Q86WI1 4243 aa4.81□□□□□ -1.64
FN1-227ENST00000498719 C9orf92A6NGG3 77 aa4.81□□□□□ -1.64
FN1-227ENST00000498719 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
FN1-227ENST00000498719 KMT2CQ8NEZ4 4911 aaKnown RBP4.79□□□□□ -1.64
FN1-227ENST00000498719 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
FN1-227ENST00000498719 KRTAP10-4P60372 401 aaPredicted RBP4.75□□□□□ -1.65
FN1-227ENST00000498719 RPS29P62273 56 aaKnown RBP4.75□□□□□ -1.65
FN1-227ENST00000498719 FLG2Q5D862 2391 aaPredicted RBP4.74□□□□□ -1.65
FN1-227ENST00000498719 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
FN1-227ENST00000498719 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
FN1-227ENST00000498719 A0A1B0GVY2 172 aa4.74□□□□□ -1.65
FN1-227ENST00000498719 RYR2Q92736 4967 aa4.74□□□□□ -1.65
FN1-227ENST00000498719 TPRXLQ17RH7 258 aa4.73□□□□□ -1.65
FN1-227ENST00000498719 SPATA8Q6RVD6 105 aa4.72□□□□□ -1.65
FN1-227ENST00000498719 UQCR11O14957 56 aa4.72□□□□□ -1.65
FN1-227ENST00000498719 HSPG2P98160 4391 aa4.7□□□□□ -1.66
FN1-227ENST00000498719 MYCBP2O75592 4640 aa4.69□□□□□ -1.66
FN1-227ENST00000498719 TNXBP22105 4242 aa4.69□□□□□ -1.66
FN1-227ENST00000498719 DMBT1Q9UGM3 2413 aaPredicted RBP4.68□□□□□ -1.66
FN1-227ENST00000498719 FAT3Q8TDW7 4589 aa4.67□□□□□ -1.66
FN1-227ENST00000498719 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
FN1-227ENST00000498719 H0YAA0 97 aa4.61□□□□□ -1.67
FN1-227ENST00000498719 RYR3Q15413 4870 aa4.6□□□□□ -1.67
FN1-227ENST00000498719 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
FN1-227ENST00000498719 COX6B2Q6YFQ2 88 aa4.56□□□□□ -1.68
FN1-227ENST00000498719 KRTAP10-8P60410 259 aa4.55□□□□□ -1.68
FN1-227ENST00000498719 KRTAP17-1Q9BYP8 105 aa4.55□□□□□ -1.68
FN1-227ENST00000498719 Q5VSD8 79 aa4.55□□□□□ -1.68
FN1-227ENST00000498719 KIAA1109Q2LD37 5005 aa4.55□□□□□ -1.68
FN1-227ENST00000498719 LPAP08519 4548 aa4.54□□□□□ -1.68
FN1-227ENST00000498719 RYR1P21817 5038 aa4.53□□□□□ -1.68
FN1-227ENST00000498719 H1FX-AS1Q4G0G2 97 aa4.53□□□□□ -1.68
FN1-227ENST00000498719 XP32Q5T750 250 aa4.5□□□□□ -1.69
FN1-227ENST00000498719 RPL37P61927 97 aaKnown RBP4.49□□□□□ -1.69
FN1-227ENST00000498719 LRP2P98164 4655 aa4.49□□□□□ -1.69
FN1-227ENST00000498719 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
FN1-227ENST00000498719 EPPK1P58107 5090 aaKnown RBP4.44□□□□□ -1.7
FN1-227ENST00000498719 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
FN1-227ENST00000498719 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
FN1-227ENST00000498719 ABCA13Q86UQ4 5058 aa4.42□□□□□ -1.7
FN1-227ENST00000498719 S4R3F8 94 aa4.42□□□□□ -1.7
FN1-227ENST00000498719 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
FN1-227ENST00000498719 A0A0D9SG42 100 aa4.4□□□□□ -1.7
FN1-227ENST00000498719 CRIPTQ9P021 101 aa4.4□□□□□ -1.7
FN1-227ENST00000498719 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
FN1-227ENST00000498719 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
FN1-227ENST00000498719 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
FN1-227ENST00000498719 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
FN1-227ENST00000498719 KRTAP4-8Q9BYQ9 185 aa4.27□□□□□ -1.73
FN1-227ENST00000498719 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
FN1-227ENST00000498719 BIRC6Q9NR09 4857 aa4.27□□□□□ -1.73
FN1-227ENST00000498719 INE1O15225 51 aa4.26□□□□□ -1.73
FN1-227ENST00000498719 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
FN1-227ENST00000498719 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
FN1-227ENST00000498719 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
FN1-227ENST00000498719 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
FN1-227ENST00000498719 MUC2Q02817 5179 aa4.21□□□□□ -1.74
FN1-227ENST00000498719 HERC2O95714 4834 aa4.17□□□□□ -1.74
FN1-227ENST00000498719 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
FN1-227ENST00000498719 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
FN1-227ENST00000498719 M0QZ58 72 aa4.15□□□□□ -1.74
FN1-227ENST00000498719 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.76
FN1-227ENST00000498719 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
FN1-227ENST00000498719 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
FN1-227ENST00000498719 KRTAP19-2Q3LHN2 52 aa4.06□□□□□ -1.76
FN1-227ENST00000498719 KRTAP4-8A0A0G2JLE6 195 aa4.05□□□□□ -1.76
FN1-227ENST00000498719 HERC1Q15751 4861 aa4.04□□□□□ -1.76
FN1-227ENST00000498719 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
FN1-227ENST00000498719 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
FN1-227ENST00000498719 LCE3BQ5TA77 95 aa4.02□□□□□ -1.77
FN1-227ENST00000498719 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
FN1-227ENST00000498719 KRTAP19-1Q8IUB9 90 aa4.01□□□□□ -1.77
FN1-227ENST00000498719 KRTAP9-3Q9BYQ3 159 aa4□□□□□ -1.77
FN1-227ENST00000498719 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
FN1-227ENST00000498719 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
FN1-227ENST00000498719 PP632Q6XCG6 107 aa3.94□□□□□ -1.78
FN1-227ENST00000498719 HMCN2Q8NDA2 5059 aa3.92□□□□□ -1.78
FN1-227ENST00000498719 MT3P25713 68 aa3.9□□□□□ -1.78
FN1-227ENST00000498719 RNF213Q63HN8 5207 aa3.89□□□□□ -1.79
FN1-227ENST00000498719 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.8
FN1-227ENST00000498719 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.8
FN1-227ENST00000498719 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
FN1-227ENST00000498719 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
FN1-227ENST00000498719 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
FN1-227ENST00000498719 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
FN1-227ENST00000498719 M0R2T5 61 aa3.74□□□□□ -1.81
FN1-227ENST00000498719 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
FN1-227ENST00000498719 TNP1P09430 55 aa3.73□□□□□ -1.81
FN1-227ENST00000498719 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
FN1-227ENST00000498719 MT1HP80294 61 aa3.71□□□□□ -1.82
FN1-227ENST00000498719 SPRR2GQ9BYE4 73 aa3.71□□□□□ -1.82
FN1-227ENST00000498719 MT1FP04733 61 aa3.67□□□□□ -1.82
FN1-227ENST00000498719 KRTAP10-10P60014 251 aa3.65□□□□□ -1.82
FN1-227ENST00000498719 MT2AP02795 61 aa3.65□□□□□ -1.83
FN1-227ENST00000498719 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms