RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 IGHV6-1A0A0B4J1U7 121 aa2.5□□□□□ -2.01
SSR3-209ENST00000498205 A8MUN3 132 aa2.5□□□□□ -2.01
SSR3-209ENST00000498205 RPS29P62273 56 aaKnown RBP2.5□□□□□ -2.01
SSR3-209ENST00000498205 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
SSR3-209ENST00000498205 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
SSR3-209ENST00000498205 ACYP2P14621 99 aa2.49□□□□□ -2.01
SSR3-209ENST00000498205 PMAIP1Q13794 54 aa2.49□□□□□ -2.01
SSR3-209ENST00000498205 C1orf134Q5TEV5 83 aa2.49□□□□□ -2.01
SSR3-209ENST00000498205 DNAH8Q96JB1 4490 aa2.49□□□□□ -2.01
SSR3-209ENST00000498205 STARD9Q9P2P6 4700 aa2.49□□□□□ -2.01
SSR3-209ENST00000498205 CHKB-CPT1BH3BT56 60 aa2.48□□□□□ -2.01
SSR3-209ENST00000498205 PSPHP1O15172 72 aa2.48□□□□□ -2.01
SSR3-209ENST00000498205 NDUFS5O43920 106 aa2.48□□□□□ -2.01
SSR3-209ENST00000498205 HRES1P13985 223 aa2.48□□□□□ -2.01
SSR3-209ENST00000498205 KRTAP21-3Q3LHN1 58 aa2.48□□□□□ -2.01
SSR3-209ENST00000498205 KRTAP13-2Q52LG2 175 aa2.48□□□□□ -2.01
SSR3-209ENST00000498205 PRR15LQ9BU68 103 aa2.47□□□□□ -2.01
SSR3-209ENST00000498205 RYR1P21817 5038 aa2.46□□□□□ -2.02
SSR3-209ENST00000498205 LINC00313P59037 77 aa2.46□□□□□ -2.02
SSR3-209ENST00000498205 A6NED7 52 aa2.45□□□□□ -2.02
SSR3-209ENST00000498205 SPINK1P00995 79 aa2.45□□□□□ -2.02
SSR3-209ENST00000498205 LCA10Q71F78 164 aa2.45□□□□□ -2.02
SSR3-209ENST00000498205 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
SSR3-209ENST00000498205 KMT2AQ03164 3969 aa2.45□□□□□ -2.02
SSR3-209ENST00000498205 DNAH5Q8TE73 4624 aa2.44□□□□□ -2.02
SSR3-209ENST00000498205 A6NN06 94 aa2.44□□□□□ -2.02
SSR3-209ENST00000498205 PCOTHQ58A44 107 aa2.44□□□□□ -2.02
SSR3-209ENST00000498205 SPAG11AQ6PDA7 123 aa2.44□□□□□ -2.02
SSR3-209ENST00000498205 CIRBP-AS1Q8TBR5 109 aa2.44□□□□□ -2.02
SSR3-209ENST00000498205 ALMS1Q8TCU4 4167 aa2.43□□□□□ -2.02
SSR3-209ENST00000498205 DNAH11Q96DT5 4516 aa2.43□□□□□ -2.02
SSR3-209ENST00000498205 SPATA8Q6RVD6 105 aa2.42□□□□□ -2.02
SSR3-209ENST00000498205 FRAS1Q86XX4 4008 aa2.41□□□□□ -2.02
SSR3-209ENST00000498205 SEC61GP60059 68 aa2.41□□□□□ -2.02
SSR3-209ENST00000498205 C7orf65Q6ZTY9 151 aa2.41□□□□□ -2.02
SSR3-209ENST00000498205 SPINK6Q6UWN8 80 aa2.4□□□□□ -2.03
SSR3-209ENST00000498205 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
SSR3-209ENST00000498205 UQCR11O14957 56 aa2.39□□□□□ -2.03
SSR3-209ENST00000498205 SPTSSBQ8NFR3 76 aa2.39□□□□□ -2.03
SSR3-209ENST00000498205 FAT2Q9NYQ8 4349 aa2.39□□□□□ -2.03
SSR3-209ENST00000498205 A0A1B0GU69 56 aa2.38□□□□□ -2.03
SSR3-209ENST00000498205 SPINK7P58062 85 aa2.38□□□□□ -2.03
SSR3-209ENST00000498205 C20orf166-AS1Q96NR2 134 aa2.38□□□□□ -2.03
SSR3-209ENST00000498205 VPS13BQ7Z7G8 4022 aa2.38□□□□□ -2.03
SSR3-209ENST00000498205 A8MUU9 505 aa2.37□□□□□ -2.03
SSR3-209ENST00000498205 LY6G6CO95867 125 aa2.37□□□□□ -2.03
SSR3-209ENST00000498205 SACSQ9NZJ4 4579 aa2.37□□□□□ -2.03
SSR3-209ENST00000498205 PKD1P98161 4303 aa2.37□□□□□ -2.03
SSR3-209ENST00000498205 LINC00304Q8N9R0 145 aa2.36□□□□□ -2.03
SSR3-209ENST00000498205 PKHD1L1Q86WI1 4243 aa2.34□□□□□ -2.03
SSR3-209ENST00000498205 KIAA1109Q2LD37 5005 aa2.34□□□□□ -2.03
SSR3-209ENST00000498205 RYR3Q15413 4870 aa2.34□□□□□ -2.03
SSR3-209ENST00000498205 MIR22HGQ0VDD5 57 aa2.34□□□□□ -2.03
SSR3-209ENST00000498205 RBM12B-AS1Q9P1G2 102 aa2.33□□□□□ -2.04
SSR3-209ENST00000498205 BIRC6Q9NR09 4857 aa2.33□□□□□ -2.04
SSR3-209ENST00000498205 FLG2Q5D862 2391 aaPredicted RBP2.32□□□□□ -2.04
SSR3-209ENST00000498205 APOBP04114 4563 aaKnown RBP2.31□□□□□ -2.04
SSR3-209ENST00000498205 KRTAP10-4P60372 401 aaPredicted RBP2.31□□□□□ -2.04
SSR3-209ENST00000498205 DYNC1H1Q14204 4646 aaKnown RBP2.31□□□□□ -2.04
SSR3-209ENST00000498205 RETNLBQ9BQ08 111 aa2.3□□□□□ -2.04
SSR3-209ENST00000498205 PKHD1P08F94 4074 aa2.28□□□□□ -2.04
SSR3-209ENST00000498205 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
SSR3-209ENST00000498205 COX6B2Q6YFQ2 88 aa2.28□□□□□ -2.04
SSR3-209ENST00000498205 HYDINQ4G0P3 5121 aa2.28□□□□□ -2.05
SSR3-209ENST00000498205 A0A1B0GU33 70 aa2.26□□□□□ -2.05
SSR3-209ENST00000498205 LINC01554Q52M75 96 aa2.26□□□□□ -2.05
SSR3-209ENST00000498205 KMT2CQ8NEZ4 4911 aaKnown RBP2.26□□□□□ -2.05
SSR3-209ENST00000498205 H1FX-AS1Q4G0G2 97 aa2.25□□□□□ -2.05
SSR3-209ENST00000498205 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
SSR3-209ENST00000498205 DMBT1Q9UGM3 2413 aaPredicted RBP2.25□□□□□ -2.05
SSR3-209ENST00000498205 FAT1Q14517 4588 aa2.24□□□□□ -2.05
SSR3-209ENST00000498205 H0YAA0 97 aa2.24□□□□□ -2.05
SSR3-209ENST00000498205 K7ERS5 55 aa2.24□□□□□ -2.05
SSR3-209ENST00000498205 EPPK1P58107 5090 aaKnown RBP2.23□□□□□ -2.05
SSR3-209ENST00000498205 RPL37P61927 97 aaKnown RBP2.22□□□□□ -2.05
SSR3-209ENST00000498205 TNXBP22105 4242 aa2.22□□□□□ -2.05
SSR3-209ENST00000498205 FAT3Q8TDW7 4589 aa2.2□□□□□ -2.06
SSR3-209ENST00000498205 MUC2Q02817 5179 aa2.2□□□□□ -2.06
SSR3-209ENST00000498205 C9orf92A6NGG3 77 aa2.19□□□□□ -2.06
SSR3-209ENST00000498205 KRTAP25-1Q3LHN0 102 aa2.19□□□□□ -2.06
SSR3-209ENST00000498205 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SSR3-209ENST00000498205 CSAG1Q6PB30 78 aa2.18□□□□□ -2.06
SSR3-209ENST00000498205 ADM2Q7Z4H4 148 aa2.18□□□□□ -2.06
SSR3-209ENST00000498205 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
SSR3-209ENST00000498205 RYR2Q92736 4967 aa2.17□□□□□ -2.06
SSR3-209ENST00000498205 HSPG2P98160 4391 aa2.17□□□□□ -2.06
SSR3-209ENST00000498205 SMR3BP02814 79 aaPredicted RBP2.17□□□□□ -2.06
SSR3-209ENST00000498205 TPRXLQ17RH7 258 aa2.17□□□□□ -2.06
SSR3-209ENST00000498205 M0QZ58 72 aa2.16□□□□□ -2.06
SSR3-209ENST00000498205 ROMO1P60602 79 aa2.16□□□□□ -2.06
SSR3-209ENST00000498205 S4R3F8 94 aa2.15□□□□□ -2.07
SSR3-209ENST00000498205 Q5VSD8 79 aa2.14□□□□□ -2.07
SSR3-209ENST00000498205 MYCBP2O75592 4640 aa2.14□□□□□ -2.07
SSR3-209ENST00000498205 P0C880 135 aa2.13□□□□□ -2.07
SSR3-209ENST00000498205 MT1HL1P0DM35 61 aa2.13□□□□□ -2.07
SSR3-209ENST00000498205 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
SSR3-209ENST00000498205 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
SSR3-209ENST00000498205 HERC2O95714 4834 aa2.11□□□□□ -2.07
SSR3-209ENST00000498205 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
SSR3-209ENST00000498205 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms