RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
CTDSP1-214ENST00000497677 RPS28P62857 69 aaKnown RBP8.02□□□□□ -1.13
CTDSP1-214ENST00000497677 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
CTDSP1-214ENST00000497677 A8MUN3 132 aa7.98□□□□□ -1.13
CTDSP1-214ENST00000497677 DMAC1Q96GE9 116 aa7.97□□□□□ -1.13
CTDSP1-214ENST00000497677 ACYP2P14621 99 aa7.96□□□□□ -1.14
CTDSP1-214ENST00000497677 RBM12B-AS1Q9P1G2 102 aa7.96□□□□□ -1.14
CTDSP1-214ENST00000497677 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
CTDSP1-214ENST00000497677 C4orf26Q17RF5 130 aa7.9□□□□□ -1.14
CTDSP1-214ENST00000497677 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
CTDSP1-214ENST00000497677 COA5Q86WW8 74 aa7.86□□□□□ -1.15
CTDSP1-214ENST00000497677 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
CTDSP1-214ENST00000497677 SMIM26A0A096LP01 95 aa7.8□□□□□ -1.16
CTDSP1-214ENST00000497677 MT2AP02795 61 aa7.8□□□□□ -1.16
CTDSP1-214ENST00000497677 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
CTDSP1-214ENST00000497677 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
CTDSP1-214ENST00000497677 MT1FP04733 61 aa7.75□□□□□ -1.17
CTDSP1-214ENST00000497677 H1FX-AS1Q4G0G2 97 aa7.72□□□□□ -1.17
CTDSP1-214ENST00000497677 V9GYY9 64 aa7.72□□□□□ -1.17
CTDSP1-214ENST00000497677 KRTAP9-3Q9BYQ3 159 aa7.68□□□□□ -1.18
CTDSP1-214ENST00000497677 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
CTDSP1-214ENST00000497677 Q1T7F1 81 aa7.65□□□□□ -1.18
CTDSP1-214ENST00000497677 S4R3F8 94 aa7.64□□□□□ -1.19
CTDSP1-214ENST00000497677 USH2AO75445 5202 aa7.63□□□□□ -1.19
CTDSP1-214ENST00000497677 LCE2BO14633 110 aa7.62□□□□□ -1.19
CTDSP1-214ENST00000497677 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
CTDSP1-214ENST00000497677 LCA10Q71F78 164 aa7.56□□□□□ -1.2
CTDSP1-214ENST00000497677 SSPOA2VEC9 5147 aa7.55□□□□□ -1.2
CTDSP1-214ENST00000497677 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
CTDSP1-214ENST00000497677 SEC61GP60059 68 aa7.51□□□□□ -1.21
CTDSP1-214ENST00000497677 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
CTDSP1-214ENST00000497677 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
CTDSP1-214ENST00000497677 A0A1B0GU69 56 aa7.48□□□□□ -1.21
CTDSP1-214ENST00000497677 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
CTDSP1-214ENST00000497677 PSPHP1O15172 72 aa7.42□□□□□ -1.22
CTDSP1-214ENST00000497677 Q5VV11 94 aa7.38□□□□□ -1.23
CTDSP1-214ENST00000497677 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
CTDSP1-214ENST00000497677 H0YAA0 97 aa7.37□□□□□ -1.23
CTDSP1-214ENST00000497677 KRTAP9-7A8MTY7 169 aa7.36□□□□□ -1.23
CTDSP1-214ENST00000497677 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.34□□□□□ -1.23
CTDSP1-214ENST00000497677 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
CTDSP1-214ENST00000497677 UQCR11O14957 56 aa7.28□□□□□ -1.24
CTDSP1-214ENST00000497677 A6NED7 52 aa7.26□□□□□ -1.25
CTDSP1-214ENST00000497677 ADM2Q7Z4H4 148 aa7.26□□□□□ -1.25
CTDSP1-214ENST00000497677 A0A1B0GU33 70 aa7.25□□□□□ -1.25
CTDSP1-214ENST00000497677 KRTAP3-2Q9BYR7 98 aa7.24□□□□□ -1.25
CTDSP1-214ENST00000497677 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
CTDSP1-214ENST00000497677 SYNE2Q8WXH0 6885 aaKnown RBP7.16□□□□□ -1.26
CTDSP1-214ENST00000497677 P0C880 135 aa7.16□□□□□ -1.26
CTDSP1-214ENST00000497677 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
CTDSP1-214ENST00000497677 CDC42SE1Q9NRR8 79 aa7.16□□□□□ -1.26
CTDSP1-214ENST00000497677 MT1BP07438 61 aa7.15□□□□□ -1.26
CTDSP1-214ENST00000497677 KRTAP19-8Q3LI54 63 aa7.15□□□□□ -1.26
CTDSP1-214ENST00000497677 SPATA8Q6RVD6 105 aa7.15□□□□□ -1.26
CTDSP1-214ENST00000497677 M0QZ58 72 aa7.14□□□□□ -1.27
CTDSP1-214ENST00000497677 BRK1Q8WUW1 75 aa7.14□□□□□ -1.27
CTDSP1-214ENST00000497677 CRIPTQ9P021 101 aa7.1□□□□□ -1.27
CTDSP1-214ENST00000497677 MACF1Q9UPN3 7388 aaKnown RBP7.09□□□□□ -1.27
CTDSP1-214ENST00000497677 R4GN34 69 aa7.05□□□□□ -1.28
CTDSP1-214ENST00000497677 PRO0628Q9UI54 55 aa7.03□□□□□ -1.28
CTDSP1-214ENST00000497677 KRTAP13-4Q3LI77 160 aa6.98□□□□□ -1.29
CTDSP1-214ENST00000497677 A6NN06 94 aa6.97□□□□□ -1.29
CTDSP1-214ENST00000497677 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
CTDSP1-214ENST00000497677 K7ERS5 55 aa6.94□□□□□ -1.3
CTDSP1-214ENST00000497677 A8MU10 97 aa6.91□□□□□ -1.3
CTDSP1-214ENST00000497677 A0A0D9SG42 100 aa6.89□□□□□ -1.31
CTDSP1-214ENST00000497677 KRTAP6-3Q3LI67 103 aa6.89□□□□□ -1.31
CTDSP1-214ENST00000497677 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
CTDSP1-214ENST00000497677 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
CTDSP1-214ENST00000497677 PMAIP1Q13794 54 aa6.78□□□□□ -1.32
CTDSP1-214ENST00000497677 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
CTDSP1-214ENST00000497677 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
CTDSP1-214ENST00000497677 MT1XP80297 61 aa6.72□□□□□ -1.33
CTDSP1-214ENST00000497677 NEBP20929 6669 aa6.72□□□□□ -1.33
CTDSP1-214ENST00000497677 PLAC4Q8WY50 150 aa6.7□□□□□ -1.34
CTDSP1-214ENST00000497677 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.34
CTDSP1-214ENST00000497677 KRTAP5-9P26371 169 aa6.63□□□□□ -1.35
CTDSP1-214ENST00000497677 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
CTDSP1-214ENST00000497677 CAMK2N1Q7Z7J9 78 aa6.6□□□□□ -1.35
CTDSP1-214ENST00000497677 ROMO1P60602 79 aa6.57□□□□□ -1.36
CTDSP1-214ENST00000497677 KMT2DO14686 5537 aa6.53□□□□□ -1.36
CTDSP1-214ENST00000497677 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
CTDSP1-214ENST00000497677 MDN1Q9NU22 5596 aa6.43□□□□□ -1.38
CTDSP1-214ENST00000497677 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
CTDSP1-214ENST00000497677 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
CTDSP1-214ENST00000497677 KRTAP8-1Q8IUC2 63 aa6.41□□□□□ -1.38
CTDSP1-214ENST00000497677 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
CTDSP1-214ENST00000497677 KRTAP20-1Q3LI63 56 aa6.4□□□□□ -1.38
CTDSP1-214ENST00000497677 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
CTDSP1-214ENST00000497677 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
CTDSP1-214ENST00000497677 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
CTDSP1-214ENST00000497677 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
CTDSP1-214ENST00000497677 SVIPQ8NHG7 77 aa6.35□□□□□ -1.39
CTDSP1-214ENST00000497677 TNP1P09430 55 aa6.32□□□□□ -1.4
CTDSP1-214ENST00000497677 SPRR2EP22531 72 aa6.29□□□□□ -1.4
CTDSP1-214ENST00000497677 SPRR2BP35325 72 aa6.29□□□□□ -1.4
CTDSP1-214ENST00000497677 SPRR2AP35326 72 aa6.29□□□□□ -1.4
CTDSP1-214ENST00000497677 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
CTDSP1-214ENST00000497677 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
CTDSP1-214ENST00000497677 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms