RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.94■□□□□ 0.145e-9■■■■■ 432.9
CTDSP1-214ENST00000497677 SF3B1O75533 1304 aaKnown RBP eCLIP17.4■□□□□ 0.383e-6■■■■■ 90.4
CTDSP1-214ENST00000497677 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.096e-12■■■■■ 82.1
CTDSP1-214ENST00000497677 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.57■□□□□ 0.083e-8■■■■■ 70.6
CTDSP1-214ENST00000497677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.518e-9■■■■■ 56.4
CTDSP1-214ENST00000497677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.69■■□□□ 1.73e-9■■■■■ 48.7
CTDSP1-214ENST00000497677 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■■■■ 37.4
CTDSP1-214ENST00000497677 DDX6P26196 483 aaKnown RBP eCLIP16.95■□□□□ 0.35e-6■■■■■ 34.8
CTDSP1-214ENST00000497677 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.55■□□□□ 0.241e-8■■■■■ 33.1
CTDSP1-214ENST00000497677 EFTUD2Q15029 972 aaKnown RBP eCLIP15.37■□□□□ 0.055e-10■■■■■ 29
CTDSP1-214ENST00000497677 SMNDC1O75940 238 aaKnown RBP eCLIP14.25□□□□□ -0.133e-7■■■■■ 27.2
CTDSP1-214ENST00000497677 NONOQ15233 471 aaKnown RBP eCLIP18.09■□□□□ 0.493e-6■■■■□ 26.2
CTDSP1-214ENST00000497677 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.45□□□□□ -0.265e-8■■■■□ 25.6
CTDSP1-214ENST00000497677 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.862e-6■■■■□ 22.8
CTDSP1-214ENST00000497677 CDC40O60508 579 aaKnown RBP eCLIP14.63□□□□□ -0.075e-7■■■■□ 22.3
CTDSP1-214ENST00000497677 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.88□□□□□ -0.033e-11■■■■□ 21.4
CTDSP1-214ENST00000497677 RBFOX2O43251 390 aaKnown RBP eCLIP12.54□□□□□ -0.45e-6■■■□□ 19.2
CTDSP1-214ENST00000497677 GTF2F1P35269 517 aaKnown RBP eCLIP17.58■□□□□ 0.41e-8■■■□□ 18.5
CTDSP1-214ENST00000497677 PRPF4O43172 522 aaKnown RBP eCLIP15.37■□□□□ 0.056e-7■■■□□ 18.2
CTDSP1-214ENST00000497677 DDX3XO00571 662 aaKnown RBP eCLIP16.44■□□□□ 0.223e-13■■■□□ 17.9
CTDSP1-214ENST00000497677 SF3A3Q12874 501 aaKnown RBP eCLIP14.91□□□□□ -0.021e-6■■■□□ 17.8
CTDSP1-214ENST00000497677 UPF1Q92900 1129 aaKnown RBP eCLIP22.35■■□□□ 1.174e-7■■■□□ 16.6
CTDSP1-214ENST00000497677 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.79■□□□□ 0.285e-7■■■□□ 16
CTDSP1-214ENST00000497677 PPIGQ13427 754 aaKnown RBP eCLIP18.19■□□□□ 0.55e-8■■■□□ 15.9
CTDSP1-214ENST00000497677 PCBP2Q15366 365 aaKnown RBP eCLIP15.04■□□□□ -02e-6■■■□□ 15.7
CTDSP1-214ENST00000497677 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.19■□□□□ 0.51e-10■■□□□ 14.2
CTDSP1-214ENST00000497677 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■□□□ 13.3
CTDSP1-214ENST00000497677 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.08■□□□□ 07e-7■■□□□ 12.7
CTDSP1-214ENST00000497677 SF3B4Q15427 424 aaKnown RBP eCLIP14.42□□□□□ -0.19e-8■■□□□ 12.6
CTDSP1-214ENST00000497677 RBM5P52756 815 aaKnown RBP eCLIP19.71■□□□□ 0.752e-6■■□□□ 12.2
CTDSP1-214ENST00000497677 NCBP2P52298 156 aaKnown RBP eCLIP14.64□□□□□ -0.071e-6■■□□□ 12
CTDSP1-214ENST00000497677 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■□□□ 11.9
CTDSP1-214ENST00000497677 NKRFO15226 690 aaKnown RBP eCLIP18.41■□□□□ 0.541e-7■■□□□ 11.7
CTDSP1-214ENST00000497677 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.78■□□□□ 0.69e-7■□□□□ 11.3
CTDSP1-214ENST00000497677 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.84□□□□□ -0.197e-9■□□□□ 10.4
CTDSP1-214ENST00000497677 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.53■□□□□ 0.247e-8■□□□□ 10.4
CTDSP1-214ENST00000497677 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.33■□□□□ 0.685e-6■□□□□ 10.3
CTDSP1-214ENST00000497677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.42■■□□□ 1.54e-17■□□□□ 10.2
CTDSP1-214ENST00000497677 XRCC6P12956 609 aaKnown RBP eCLIP17.82■□□□□ 0.448e-6■□□□□ 10.2
CTDSP1-214ENST00000497677 YBX3P16989 372 aaKnown RBP eCLIP20.91■□□□□ 0.941e-6■□□□□ 10.2
CTDSP1-214ENST00000497677 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.97■□□□□ 0.153e-6■□□□□ 10
CTDSP1-214ENST00000497677 FUSP35637 526 aaKnown RBP eCLIP10.64□□□□□ -0.719e-7■□□□□ 9.5
CTDSP1-214ENST00000497677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.5■□□□□ 0.711e-6■□□□□ 9.3
CTDSP1-214ENST00000497677 TROVE2P10155 538 aaKnown RBP eCLIP15.12■□□□□ 0.013e-6■□□□□ 9.2
CTDSP1-214ENST00000497677 HNRNPKP61978 463 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■□□□□ 8.8
Retrieved 45 of 45 RNA–protein pairs in 10.7 ms